FFCP PHASE1:Hg19::chr12:11802753..11802834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2120 | |EntrezGene=2120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3495 | |HGNC=3495 | ||
|TSSclassifier=strong | |||
|UniProt=P41212 | |UniProt=P41212 | ||
|association_with_transcript=0bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | |association_with_transcript=0bp_to_ENST00000396373,NM_001987,uc001qzz.2_5end | ||
|cluster_id=chr12:11802753..11802834,+ | |||
|coexpression_cluster_id=C2187 | |||
|description=CAGE_peak_2_at_ETV6_5end | |description=CAGE_peak_2_at_ETV6_5end | ||
|id=chr12:11802753..11802834,+ | |id=chr12:11802753..11802834,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.55e-43!182;CL:0000037!3.00e-42!172;CL:0000566!3.00e-42!172;CL:0002032!8.72e-40!165;CL:0000837!8.72e-40!165;CL:0000738!3.60e-38!140;CL:0000763!2.60e-36!112;CL:0000049!2.60e-36!112;CL:0000766!5.18e-32!76;CL:0000557!4.80e-29!71;CL:0002087!9.87e-29!119;CL:0002031!4.62e-28!124;CL:0002009!1.91e-26!65;CL:0002194!1.54e-25!63;CL:0000576!1.54e-25!63;CL:0000040!1.54e-25!63;CL:0000559!1.54e-25!63;CL:0000839!4.25e-25!70;CL:0002057!7.71e-25!42;CL:0000860!7.51e-21!45;CL:0000451!1.75e-07!10;CL:0000115!3.52e-07!35;CL:0000134!8.59e-07!358;CL:0002139!9.26e-07!24 | |ontology_enrichment_celltype=CL:0000988!1.55e-43!182;CL:0000037!3.00e-42!172;CL:0000566!3.00e-42!172;CL:0002032!8.72e-40!165;CL:0000837!8.72e-40!165;CL:0000738!3.60e-38!140;CL:0000763!2.60e-36!112;CL:0000049!2.60e-36!112;CL:0000766!5.18e-32!76;CL:0000557!4.80e-29!71;CL:0002087!9.87e-29!119;CL:0002031!4.62e-28!124;CL:0002009!1.91e-26!65;CL:0002194!1.54e-25!63;CL:0000576!1.54e-25!63;CL:0000040!1.54e-25!63;CL:0000559!1.54e-25!63;CL:0000839!4.25e-25!70;CL:0002057!7.71e-25!42;CL:0000860!7.51e-21!45;CL:0000451!1.75e-07!10;CL:0000115!3.52e-07!35;CL:0000134!8.59e-07!358;CL:0002139!9.26e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-20;33!CL:0002057;2.17e-20;33!CL:0000473;3.69e-19;39!CL:0000234;3.69e-19;39!CL:0000576;5.88e-17;48!CL:0000766;5.21e-15;69!CL:0000763;5.97e-12;100!CL:0000738;8.27e-10;136!CL:0002087;8.87e-09;104!CL:0000988;5.20e-08;177!CL:0000451;1.51e-07;10!CL:0002139;8.85e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.48e-46,177;CL:0000037,7.56e-45,168;CL:0002032,2.45e-42,161;CL:0000837,2.45e-42,161;CL:0000738,5.42e-41,136;CL:0000763,1.83e-39,108;CL:0000049,1.83e-39,108;CL:0000766,7.08e-36,72;CL:0000557,7.82e-33,67;CL:0002087,2.60e-31,115;CL:0002031,1.41e-30,120;CL:0002009,3.17e-30,61;CL:0002194,2.60e-29,59;CL:0000576,2.60e-29,59;CL:0000040,2.60e-29,59;CL:0000559,2.60e-29,59;CL:0000839,1.33e-28,66;CL:0000473,3.10e-27,48;CL:0000234,3.10e-27,48;CL:0000860,7.21e-25,42;CL:0002057,7.21e-25,42;CL:0000451,1.72e-07,10;CL:0000134,1.96e-07,354;CL:0000115,4.19e-07,36;CL:0002320,5.79e-07,361;CL:0002139,9.12e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-18;42!CL:0000049;1.02e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.60e-36!112;UBERON:0002390!3.81e-35!102;UBERON:0003061!3.81e-35!102;UBERON:0002371!1.10e-26!80;UBERON:0002405!9.32e-25!115;UBERON:0001474!3.72e-23!86;UBERON:0004765!1.86e-18!101;UBERON:0001434!1.86e-18!101;UBERON:0003081!8.08e-17!216;UBERON:0000178!8.69e-08!15;UBERON:0000179!8.69e-08!15;UBERON:0000463!8.69e-08!15;UBERON:0007023!4.46e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.36e-08;15!UBERON:0000179;7.36e-08;15!UBERON:0000463;7.36e-08;15!UBERON:0002390;2.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.33e-40,108;UBERON:0002390,1.80e-38,98;UBERON:0003061,1.80e-38,98;UBERON:0002405,1.25e-32,93;UBERON:0002371,6.04e-30,76;UBERON:0001474,7.41e-26,82;UBERON:0004765,3.63e-22,90;UBERON:0001434,1.41e-19,100;UBERON:0003081,5.66e-18,203;UBERON:0000178,8.53e-08,15;UBERON:0000179,8.53e-08,15;UBERON:0000463,8.53e-08,15;UBERON:0007023,5.84e-07,114 | |||
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| ||
|short_description=p2@ETV6 | |short_description=p2@ETV6 | ||
}} | }} |
Latest revision as of 16:38, 16 September 2015
Short description: | p2@ETV6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ETV6_5end |
Coexpression cluster: | C2187_granulocyte_CD14_migratory_Eosinophils_Neutrophils_CD34_acute |
Association with transcript: | 0bp_to_ENST00000396373, NM_001987, uc001qzz.2_5end |
EntrezGene: | ETV6 |
HGNC: | 3495 |
UniProt: | P41212 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.48e-46 | 177 |
hematopoietic stem cell | 7.56e-45 | 168 |
hematopoietic oligopotent progenitor cell | 2.45e-42 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-42 | 161 |
leukocyte | 5.42e-41 | 136 |
myeloid cell | 1.83e-39 | 108 |
common myeloid progenitor | 1.83e-39 | 108 |
myeloid leukocyte | 7.08e-36 | 72 |
granulocyte monocyte progenitor cell | 7.82e-33 | 67 |
nongranular leukocyte | 2.60e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 1.41e-30 | 120 |
macrophage dendritic cell progenitor | 3.17e-30 | 61 |
monopoietic cell | 2.60e-29 | 59 |
monocyte | 2.60e-29 | 59 |
monoblast | 2.60e-29 | 59 |
promonocyte | 2.60e-29 | 59 |
myeloid lineage restricted progenitor cell | 1.33e-28 | 66 |
defensive cell | 3.10e-27 | 48 |
phagocyte | 3.10e-27 | 48 |
classical monocyte | 7.21e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.21e-25 | 42 |
dendritic cell | 1.72e-07 | 10 |
mesenchymal cell | 1.96e-07 | 354 |
endothelial cell | 4.19e-07 | 36 |
connective tissue cell | 5.79e-07 | 361 |
endothelial cell of vascular tree | 9.12e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.33e-40 | 108 |
hematopoietic system | 1.80e-38 | 98 |
blood island | 1.80e-38 | 98 |
immune system | 1.25e-32 | 93 |
bone marrow | 6.04e-30 | 76 |
bone element | 7.41e-26 | 82 |
skeletal element | 3.63e-22 | 90 |
skeletal system | 1.41e-19 | 100 |
lateral plate mesoderm | 5.66e-18 | 203 |
blood | 8.53e-08 | 15 |
haemolymphatic fluid | 8.53e-08 | 15 |
organism substance | 8.53e-08 | 15 |
adult organism | 5.84e-07 | 114 |