FFCP PHASE1:Mm9::chr17:24625528..24625611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268932 | |EntrezGene=268932 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9K8 | |UniProt=Q6P9K8 | ||
|association_with_transcript=-116bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end | |association_with_transcript=-116bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end | ||
|cluster_id=chr17:24625528..24625611,+ | |||
|description=CAGE_peak_1_at_Caskin1_5end | |description=CAGE_peak_1_at_Caskin1_5end | ||
|id=chr17:24625528..24625611,+ | |id=chr17:24625528..24625611,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0000540!9.48e-15!33;CL:0000047!9.48e-15!33;CL:0000031!9.48e-15!33;CL:0000404!9.48e-15!33;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0002319!2.72e-12!43;CL:0000393!4.11e-10!39;CL:0000211!4.11e-10!39;CL:0000055!2.79e-08!50 | |ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0000540!9.48e-15!33;CL:0000047!9.48e-15!33;CL:0000031!9.48e-15!33;CL:0000404!9.48e-15!33;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0002319!2.72e-12!43;CL:0000393!4.11e-10!39;CL:0000211!4.11e-10!39;CL:0000055!2.79e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-17,23;CL:0000337,4.10e-17,23;CL:0000540,1.24e-16,33;CL:0000047,1.24e-16,33;CL:0000031,1.24e-16,33;CL:0000404,1.24e-16,33;CL:0000221,1.82e-13,44;CL:0000133,1.82e-13,44;CL:0002319,4.41e-13,43;CL:0000393,6.61e-12,39;CL:0000211,6.61e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.82e-30!73;UBERON:0005743!7.82e-30!73;UBERON:0002346!3.17e-29!71;UBERON:0003075!3.17e-29!71;UBERON:0007284!3.17e-29!71;UBERON:0000073!5.50e-29!75;UBERON:0001016!5.50e-29!75;UBERON:0004121!8.15e-28!102;UBERON:0000924!8.15e-28!102;UBERON:0006601!8.15e-28!102;UBERON:0001049!6.61e-25!52;UBERON:0005068!6.61e-25!52;UBERON:0006241!6.61e-25!52;UBERON:0007135!6.61e-25!52;UBERON:0000033!7.36e-25!63;UBERON:0000955!4.22e-23!50;UBERON:0006238!4.22e-23!50;UBERON:0002616!2.08e-22!49;UBERON:0003056!1.50e-21!49;UBERON:0002020!7.41e-19!34;UBERON:0003080!9.97e-19!40;UBERON:0002780!5.28e-18!39;UBERON:0001890!5.28e-18!39;UBERON:0006240!5.28e-18!39;UBERON:0002791!4.65e-15!29;UBERON:0003528!4.65e-15!29;UBERON:0001893!4.65e-15!29;UBERON:0000153!5.28e-11!94;UBERON:0007811!5.72e-11!86;UBERON:0000956!4.87e-10!21;UBERON:0001869!4.87e-10!21;UBERON:0000203!4.87e-10!21;UBERON:0002619!1.90e-08!17;UBERON:0003076!9.34e-07!12;UBERON:0003057!9.34e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-33,73;UBERON:0002346,3.46e-32,64;UBERON:0003075,3.46e-32,64;UBERON:0007284,3.46e-32,64;UBERON:0001016,5.69e-32,75;UBERON:0000073,3.25e-30,54;UBERON:0004121,5.35e-30,95;UBERON:0000924,5.35e-30,95;UBERON:0006601,5.35e-30,95;UBERON:0001049,1.77e-28,52;UBERON:0005068,1.77e-28,52;UBERON:0006241,1.77e-28,52;UBERON:0007135,1.77e-28,52;UBERON:0010371,4.94e-27,73;UBERON:0003056,2.08e-24,49;UBERON:0000955,7.28e-24,47;UBERON:0006238,7.28e-24,47;UBERON:0002616,4.35e-23,46;UBERON:0002020,2.50e-21,34;UBERON:0003080,3.51e-21,40;UBERON:0010314,7.44e-21,92;UBERON:0002780,2.36e-20,39;UBERON:0001890,2.36e-20,39;UBERON:0006240,2.36e-20,39;UBERON:0003528,5.51e-17,29;UBERON:0002791,5.51e-17,29;UBERON:0001893,5.51e-17,29;UBERON:0000956,3.00e-11,21;UBERON:0001869,3.00e-11,21;UBERON:0000203,3.00e-11,21;UBERON:0002619,1.98e-09,17;UBERON:0003076,1.02e-07,12;UBERON:0003057,1.02e-07,12;UBERON:0002420,4.16e-07,8;UBERON:0007245,4.16e-07,8;UBERON:0010009,4.16e-07,8;UBERON:0010011,4.16e-07,8;UBERON:0000454,4.16e-07,8;UBERON:0002021,5.41e-07,10;UBERON:0000411,5.41e-07,10;UBERON:0001950,5.41e-07,10 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,1.5378032791413,2.13872888981712,0.55994568650145,0,0.167782606057736,0,0,0,0,0,23.4687094597133,21.1596391708813,21.5502677192101,0,0.889294796111139,0,0,0,1.79760066311043,3.84218305321555,5.49554945234932,6.21027316325777,4.6271491497304,52.5597811302999,39.977205912242,8.94182834269164,5.65488279007595,6.43453150627015,22.0231761998777,24.3882815742709,24.577045320999,18.9916254331479,20.5847198105422,18.7528813400434,25.1264699101243,15.757353080887,20.933359945423,50.0868595305235,47.1250263445031,28.519115211271,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0.45673551887624,0,3.41416919849097,2.60227990149204,1.21786191324856,1.38369298353635,2.56228488939458,3.76283862834255,2.51333182659351,2.96633961281249,0.144599356919912,0,0.161766849947409,0,0,0,15.517382241612,15.4990563041957,0.255457055208591,0,0,0,24.4158742229861,10.980014467647,18.2198810563653,10.2556348913443,9.97290283588289,23.4800490352303,11.8436122039463,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,5.0578462975364,2.52086981727489,3.91832526372859,7.27990540919208,6.40568601424249,7.68354141389776,8.01980449290949,1.94011193639558,1.51284864134255,2.46331573829528,1.7535658594206,0.834141747676794,1.0447564995665,0.823128545631774,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,13.4585567081041,10.496270462687,0,0,1.2797295032114,1.16118335930219,0.77320476793256,1.21010114774006,2.44615848229357,1.14135375667535,0,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,0.948339504765408,1.02823661348756,0,0.814605311381257,0.969762435838129,1.1221731182451,0.252946148497029,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,18.3027672586083,19.9259867206745,0,0.252470927204373,2.52406575533005,1.95219372148319,1.72338718186239,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,1.58115111178609,19.2792789853084,1.27746076687442,2.49291845134157,2.11753047159649,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,2.38307724027652,2.70091641046965,2.8458910432206,2.7863814554107,4.78818630834139,4.8159580752559,5.43011767986999,2.74018454203139,8.91752490642099,13.7690846061483,0.220528398054962,0,0,0.301564624640779,0,0,0,24.6615651673978,0,0.412773735926445,0,0,0,0,0.169978429993855,0.139951452323658,0,0,2.37251995185852,0.813277868507395,0.972048067396211,1.88179466413022,1.09181281873089,0.674321731924103,1.07449492442937,0,0,0,1.12738587736838,5.98066184175915,5.95650565645551,9.52810822885833,6.71631082084202,7.43406952159424,7.86293498926552,7.29144555126121,10.171356409294,5.55643477899814,2.01621004380506,0,0.608175645870493,0.616265742988964,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,2.44184548711471,0.538283139656854,2.51826924546118,0.19318959403219,0,0,0,0,9.60078132449013,10.1271552031579,9.16632821503035,10.1393377582776,8.22099023724771,9.82012066606611,10.1253375034771,8.55610286126019,9.5159905886683,11.9084871702919,2.07574695168353,4.78829848081237,3.24393850932855,2.43106717068294,3.35381060204772,6.06683577885047,1.33348036680969,3.7086310303001,3.20919209591815,3.53776096469316,3.29523089857312,3.01802146217722,4.49479235855436,3.39333307745807,3.9056118889817,2.85776214769844,3.36064545240081,5.01563973205633,3.29668720642645,2.35518272215036,2.40008476669791,3.37204031702741,2.14592570952589,3.48831399917588,2.72917203204459,3.9768865709088,3.10977553883713,3.15683653725411,3.53090695999241,1.68342681497322,3.55905054372522,4.62971067165148,3.6830793885272,1.54936841185966,2.70069255373598,10.7418548513317,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,1.39120701372253 | |phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,1.5378032791413,2.13872888981712,0.55994568650145,0,0.167782606057736,0,0,0,0,0,23.4687094597133,21.1596391708813,21.5502677192101,0,0.889294796111139,0,0,0,1.79760066311043,3.84218305321555,5.49554945234932,6.21027316325777,4.6271491497304,52.5597811302999,39.977205912242,8.94182834269164,5.65488279007595,6.43453150627015,22.0231761998777,24.3882815742709,24.577045320999,18.9916254331479,20.5847198105422,18.7528813400434,25.1264699101243,15.757353080887,20.933359945423,50.0868595305235,47.1250263445031,28.519115211271,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0.45673551887624,0,3.41416919849097,2.60227990149204,1.21786191324856,1.38369298353635,2.56228488939458,3.76283862834255,2.51333182659351,2.96633961281249,0.144599356919912,0,0.161766849947409,0,0,0,15.517382241612,15.4990563041957,0.255457055208591,0,0,0,24.4158742229861,10.980014467647,18.2198810563653,10.2556348913443,9.97290283588289,23.4800490352303,11.8436122039463,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,5.0578462975364,2.52086981727489,3.91832526372859,7.27990540919208,6.40568601424249,7.68354141389776,8.01980449290949,1.94011193639558,1.51284864134255,2.46331573829528,1.7535658594206,0.834141747676794,1.0447564995665,0.823128545631774,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,13.4585567081041,10.496270462687,0,0,1.2797295032114,1.16118335930219,0.77320476793256,1.21010114774006,2.44615848229357,1.14135375667535,0,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,0.948339504765408,1.02823661348756,0,0.814605311381257,0.969762435838129,1.1221731182451,0.252946148497029,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,18.3027672586083,19.9259867206745,0,0.252470927204373,2.52406575533005,1.95219372148319,1.72338718186239,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,1.58115111178609,19.2792789853084,1.27746076687442,2.49291845134157,2.11753047159649,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,2.38307724027652,2.70091641046965,2.8458910432206,2.7863814554107,4.78818630834139,4.8159580752559,5.43011767986999,2.74018454203139,8.91752490642099,13.7690846061483,0.220528398054962,0,0,0.301564624640779,0,0,0,24.6615651673978,0,0.412773735926445,0,0,0,0,0.169978429993855,0.139951452323658,0,0,2.37251995185852,0.813277868507395,0.972048067396211,1.88179466413022,1.09181281873089,0.674321731924103,1.07449492442937,0,0,0,1.12738587736838,5.98066184175915,5.95650565645551,9.52810822885833,6.71631082084202,7.43406952159424,7.86293498926552,7.29144555126121,10.171356409294,5.55643477899814,2.01621004380506,0,0.608175645870493,0.616265742988964,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,2.44184548711471,0.538283139656854,2.51826924546118,0.19318959403219,0,0,0,0,9.60078132449013,10.1271552031579,9.16632821503035,10.1393377582776,8.22099023724771,9.82012066606611,10.1253375034771,8.55610286126019,9.5159905886683,11.9084871702919,2.07574695168353,4.78829848081237,3.24393850932855,2.43106717068294,3.35381060204772,6.06683577885047,1.33348036680969,3.7086310303001,3.20919209591815,3.53776096469316,3.29523089857312,3.01802146217722,4.49479235855436,3.39333307745807,3.9056118889817,2.85776214769844,3.36064545240081,5.01563973205633,3.29668720642645,2.35518272215036,2.40008476669791,3.37204031702741,2.14592570952589,3.48831399917588,2.72917203204459,3.9768865709088,3.10977553883713,3.15683653725411,3.53090695999241,1.68342681497322,3.55905054372522,4.62971067165148,3.6830793885272,1.54936841185966,2.70069255373598,10.7418548513317,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,1.39120701372253 | ||
|short_description=p1@Caskin1 | |short_description=p1@Caskin1 | ||
}} | }} |
Latest revision as of 01:33, 26 September 2015
Short description: | p1@Caskin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Caskin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -116bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end |
EntrezGene: | Caskin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.10e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.10e-17 | 23 |
neuron | 1.24e-16 | 33 |
neuronal stem cell | 1.24e-16 | 33 |
neuroblast | 1.24e-16 | 33 |
electrically signaling cell | 1.24e-16 | 33 |
ectodermal cell | 1.82e-13 | 44 |
neurectodermal cell | 1.82e-13 | 44 |
neural cell | 4.41e-13 | 43 |
electrically responsive cell | 6.61e-12 | 39 |
electrically active cell | 6.61e-12 | 39 |