FFCP PHASE1:Hg19::chr12:113376330..113376350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4940 | |EntrezGene=4940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8088 | |HGNC=8088 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000546638_5end | |association_with_transcript=0bp_to_ENST00000546638_5end | ||
|cluster_id=chr12:113376330..113376350,+ | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_3_at_OAS3_5end | |description=CAGE_peak_3_at_OAS3_5end | ||
|id=chr12:113376330..113376350,+ | |id=chr12:113376330..113376350,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.72e-24!42;CL:0000860!1.74e-23!45;CL:0000766!3.24e-20!76;CL:0002194!6.53e-18!63;CL:0000576!6.53e-18!63;CL:0000040!6.53e-18!63;CL:0000559!6.53e-18!63;CL:0002009!1.74e-17!65;CL:0000557!5.25e-16!71;CL:0000839!8.79e-16!70;CL:0000738!3.06e-11!140;CL:0002087!1.29e-10!119;CL:0002031!3.38e-09!124;CL:0000763!2.15e-08!112;CL:0000049!2.15e-08!112;CL:0002393!5.06e-07!9;CL:0002397!5.06e-07!9 | |ontology_enrichment_celltype=CL:0002057!3.72e-24!42;CL:0000860!1.74e-23!45;CL:0000766!3.24e-20!76;CL:0002194!6.53e-18!63;CL:0000576!6.53e-18!63;CL:0000040!6.53e-18!63;CL:0000559!6.53e-18!63;CL:0002009!1.74e-17!65;CL:0000557!5.25e-16!71;CL:0000839!8.79e-16!70;CL:0000738!3.06e-11!140;CL:0002087!1.29e-10!119;CL:0002031!3.38e-09!124;CL:0000763!2.15e-08!112;CL:0000049!2.15e-08!112;CL:0002393!5.06e-07!9;CL:0002397!5.06e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-33;33!CL:0002057;2.65e-33;33!CL:0000473;2.99e-26;39!CL:0000234;2.99e-26;39!CL:0000576;6.05e-26;48!CL:0000766;1.71e-18;69!CL:0000763;1.68e-08;100!CL:0002087;3.13e-08;104!CL:0000094;1.11e-07;8!CL:0002393;2.23e-07;6!CL:0002397;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-48,42;CL:0002057,3.69e-48,42;CL:0000473,1.65e-45,48;CL:0000234,1.65e-45,48;CL:0000766,1.05e-36,72;CL:0002194,7.51e-34,59;CL:0000576,7.51e-34,59;CL:0000040,7.51e-34,59;CL:0000559,7.51e-34,59;CL:0002009,2.36e-32,61;CL:0000839,5.20e-29,66;CL:0000557,2.11e-28,67;CL:0000763,5.53e-20,108;CL:0000049,5.53e-20,108;CL:0000738,1.09e-19,136;CL:0002087,1.82e-18,115;CL:0002031,2.36e-15,120;CL:0000037,3.15e-13,168;CL:0002032,6.03e-13,161;CL:0000837,6.03e-13,161;CL:0000988,7.26e-12,177;CL:0002393,8.62e-12,9;CL:0002397,8.62e-12,9;CL:0000094,6.78e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.76e-33;42!CL:0000049;8.24e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.22e-18!112;UBERON:0002390!5.80e-18!102;UBERON:0003061!5.80e-18!102;UBERON:0002371!1.27e-13!80;UBERON:0002405!4.17e-12!115;UBERON:0001474!4.29e-11!86;UBERON:0004765!2.58e-09!101;UBERON:0001434!2.58e-09!101;UBERON:0003081!2.16e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.94e-27,98;UBERON:0003061,9.94e-27,98;UBERON:0002193,1.36e-26,108;UBERON:0002371,2.66e-25,76;UBERON:0002405,1.49e-24,93;UBERON:0001474,1.40e-22,82;UBERON:0004765,4.36e-22,90;UBERON:0001434,7.95e-20,100;UBERON:0003081,5.08e-13,203;UBERON:0002204,4.50e-12,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0.125542639594803,2.90370941842215,2.13461532569859,2.59745578335141,3.54027849164014,1.91914699048606,0.77408061658038,0,0,0.739508020333575,0,0,0.293600439334847,1.10799081706375,0.802177789880567,2.38711957787437,0,0.32389366601898,0.515151135268373,1.01778767145695,0.377875943688809,1.4555043671269,0.464858073811369,0,1.54853185447552,21.5769294241613,6.91633907628572,19.6280250807526,5.86067657252252,1.93645405075148,0,1.12945403725563,0.545812300115692,1.57306439111559,21.7319563583341,3.53021929783703,16.6227652707751,21.1104832119498,8.97586459297343,19.6063385245039,26.6992499538297,3.97169657283798,20.553134216854,13.3161792586074,6.77927793946262,12.8141418376019,41.7725656817024,9.20694089968912,40.5071855924332,6.76016916198214,5.95292039902122,3.14487968262564,1.68492946719743,2.4028302854641,2.57160938715328,3.13514018115373,5.9675003159727,3.28795476776341,0,1.09227722252426,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,3.36305137788922,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0.589211814949674,0.443067789167242,1.35401931882508,0,0.520237390239513,0.822189523018381,0.276350017785848,0,0,0,1.04535523804977,0.226618685395132,0,0,0.759059076058509,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0.72038491523742,0.364295288292542,0,0.649094787309367,0.870648686496336,0.664789802594326,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0.732186172644509,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,8.31602000097437,2.96720315134268,0,0,0,0,0,0,0,2.10333282469236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,1.08939722046203,0.474541238222193,0.943819157121151,0.98110732562673,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.737930631258681,0,0.329250856225877,0,0.603173834469785,0.185176890317059,4.23550796903422,0,0,0,0,1.29929802984966,1.38895653772983,1.14152491340759,2.37061319387782,0,1.23108503043699,0.234004265139238,0.445893486866185,0,2.68771405118175,1.55952606966625,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0.285826432630578,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,2.43247561282381,0,0,0,0,0,0.289562613335158,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,2.99602809578873,0,12.8468809165171,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,1.24060815673732,1.07857100409308,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0.925258162815933,0,0.492762936082855,1.03850885836724,0.464841513839837,0.483437798366489,0.40101294060657,0.0920809889358963,0,0.182091168006717,0.393373244878272,0.451199612907412,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0.6970372701606,17.249880489861,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,1.56989728039846,0,0,0,0.404364963146632,0,0,0,32.4138941209608,0,0,0,2.26016233240486,0,0,5.26141062304515,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0.379473173765715,0,0.288666338176536,0,0,0.188287601553558,2.15252686335615,0,1.33029046061003,0.229723400206959,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,2.16012574895246,2.37937552888281,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.748562161632879,1.46508179271894,0,0.222886768554957,0,0.71623345421307,0.296964680832639,0,0,0.140669416410513,1.22439575525196,0,0,0.796991953004279,1.10513566212459,0,0,2.46169610922139,0,0.898683511473268,0.716084698702437,0,0.394573622547734,14.3689855408164,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0.591095237907095,0.658156191461918,0.544692317594951,0.697118721393016,0.153900517007594,0,0,0,0,1.5950057986596,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0.424059214301822,0,0,0.353830258013357,0,0,0,0,0.337005664903385,1.60515529459758,0.468528891450678,0,0.586993856796269,0,0.789168805698781,0,0,0.947798694427319,14.88201852203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| ||
|short_description=p3@OAS3 | |short_description=p3@OAS3 | ||
}} | }} |
Latest revision as of 11:46, 16 September 2015
Short description: | p3@OAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OAS3_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000546638_5end |
EntrezGene: | OAS3 |
HGNC: | 8088 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.69e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-48 | 42 |
defensive cell | 1.65e-45 | 48 |
phagocyte | 1.65e-45 | 48 |
myeloid leukocyte | 1.05e-36 | 72 |
monopoietic cell | 7.51e-34 | 59 |
monocyte | 7.51e-34 | 59 |
monoblast | 7.51e-34 | 59 |
promonocyte | 7.51e-34 | 59 |
macrophage dendritic cell progenitor | 2.36e-32 | 61 |
myeloid lineage restricted progenitor cell | 5.20e-29 | 66 |
granulocyte monocyte progenitor cell | 2.11e-28 | 67 |
myeloid cell | 5.53e-20 | 108 |
common myeloid progenitor | 5.53e-20 | 108 |
leukocyte | 1.09e-19 | 136 |
nongranular leukocyte | 1.82e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.36e-15 | 120 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.03e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.03e-13 | 161 |
hematopoietic cell | 7.26e-12 | 177 |
intermediate monocyte | 8.62e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.62e-12 | 9 |
granulocyte | 6.78e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.94e-27 | 98 |
blood island | 9.94e-27 | 98 |
hemolymphoid system | 1.36e-26 | 108 |
bone marrow | 2.66e-25 | 76 |
immune system | 1.49e-24 | 93 |
bone element | 1.40e-22 | 82 |
skeletal element | 4.36e-22 | 90 |
skeletal system | 7.95e-20 | 100 |
lateral plate mesoderm | 5.08e-13 | 203 |
musculoskeletal system | 4.50e-12 | 167 |