FFCP PHASE1:Hg19::chr12:109029618..109029632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547282_5end | |association_with_transcript=0bp_to_ENST00000547282_5end | ||
|cluster_id=chr12:109029618..109029632,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000547282_5end | |description=CAGE_peak_1_at_ENST00000547282_5end | ||
|id=chr12:109029618..109029632,+ | |id=chr12:109029618..109029632,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.27e-37!53;CL:0000051!3.27e-37!53;CL:0000838!7.11e-36!52;CL:0000945!2.33e-34!24;CL:0000826!2.33e-34!24;CL:0000738!3.02e-26!140;CL:0000037!2.56e-23!172;CL:0000566!2.56e-23!172;CL:0002087!4.57e-22!119;CL:0000236!1.27e-21!14;CL:0000988!8.11e-21!182;CL:0002032!3.12e-19!165;CL:0000837!3.12e-19!165;CL:0002031!2.53e-16!124;CL:0000084!3.07e-07!25;CL:0000827!3.07e-07!25 | |ontology_enrichment_celltype=CL:0000542!3.27e-37!53;CL:0000051!3.27e-37!53;CL:0000838!7.11e-36!52;CL:0000945!2.33e-34!24;CL:0000826!2.33e-34!24;CL:0000738!3.02e-26!140;CL:0000037!2.56e-23!172;CL:0000566!2.56e-23!172;CL:0002087!4.57e-22!119;CL:0000236!1.27e-21!14;CL:0000988!8.11e-21!182;CL:0002032!3.12e-19!165;CL:0000837!3.12e-19!165;CL:0002031!2.53e-16!124;CL:0000084!3.07e-07!25;CL:0000827!3.07e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.37e-69;24!CL:0000236;1.20e-46;13!CL:0000542;7.32e-22;53!CL:0000784;8.42e-12;3!CL:0000226;3.47e-10;3!CL:0000842;3.47e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.39e-69,24;CL:0000826,4.39e-69,24;CL:0000236,8.60e-50,14;CL:0000542,1.29e-33,53;CL:0000051,1.29e-33,53;CL:0000838,2.69e-31,52;CL:0000738,1.45e-21,136;CL:0002087,3.51e-17,115;CL:0000037,7.17e-16,168;CL:0000988,1.21e-14,177;CL:0000784,8.43e-12,3;CL:0000817,2.62e-11,3;CL:0002032,2.87e-11,161;CL:0000837,2.87e-11,161;CL:0002031,3.27e-11,120;CL:0000226,2.50e-10,3;CL:0000842,2.50e-10,3;CL:0000785,3.41e-08,2;CL:0000955,3.41e-08,2;CL:0000818,3.41e-08,2;CL:0000954,3.41e-08,2;CL:0000816,3.41e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-22;53!UBERON:0004872;4.32e-12;7!CL:0000954;3.60e-08;2!UBERON:0006965;1.62e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!3.52e-08!51;DOID:0060083!3.52e-08!51;DOID:0060058!3.78e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-19!115;UBERON:0000178!3.44e-10!15;UBERON:0000179!3.44e-10!15;UBERON:0000463!3.44e-10!15;UBERON:0004177!5.53e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.97e-20;15!UBERON:0000179;2.97e-20;15!UBERON:0000463;2.97e-20;15!UBERON:0002390;6.11e-17;32!UBERON:0002193;1.35e-12;42!UBERON:0002106;3.12e-11;3!UBERON:0004177;6.79e-07;5!UBERON:0005057;6.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.73e-20,15;UBERON:0000179,2.73e-20,15;UBERON:0000463,2.73e-20,15;UBERON:0002106,3.12e-11,3;UBERON:0004854,3.12e-11,3;UBERON:0009034,3.12e-11,3;UBERON:0002095,3.12e-11,3;UBERON:0004782,3.12e-11,3;UBERON:0003281,3.12e-11,3;UBERON:0009664,3.12e-11,3;UBERON:0002296,3.12e-11,3;UBERON:0005602,3.12e-11,3;UBERON:0001179,3.12e-11,3;UBERON:0006293,3.12e-11,3;UBERON:0007023,9.75e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,6.89644951379544,6.29686250509434,0.786728553697808,2.68680578668049,1.39334510984468,0,0,0,2.40148321798935,4.12290774213522,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,47.5189860045571,64.9904947401936,63.1551570243124,31.151306247355,60.8601900294739,60.9237586351752,57.510903932283,57.2432252721218,30.7375003319102,14.0936925449025,30.1995850218931,0,0,1.31692042387539,0.393419540227666,0,0.411202997999018,0.83593247695339,0,0.473447805734733,0,0.668462741311041,0,0,0.541607727530031,0.640456598628376,0.650296737799391,0.164437904603676,0.276350017785848,0,0,0.535081656179426,0,0.453237370790265,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,11.6860405909618,21.7358066096449,9.28643753323912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.431255149719035,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.94142780736755,1.28073069364133,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,2.27858874869665,6.90872148827588,4.93634727703433,3.24236655596359,3.24018862342869,1.58625035258854,0,0,0,16.7222857613147,3.31819189845823,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,1.19548792950642,1.38141957765574,0,0,7.75434274404738,0,0,0,0,2.07151151837561,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,15.3262022941159,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,1.06687918137261,0,0,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.423366660328922,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.26446520348538,0,0,1.60181118851542,0,0.414239055347196,4.46549419630756,17.9826585027129,0.60896299190448,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,1.14495775979091,0,0,0,0,0.106691729694141,8.95517894236241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,3.45701962667338,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0.588925401344836,0,0,0,3.57138888323444,3.02952073475813,10.4938213721175,0,0,0,0,2.75237570042724,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,1.49263787330687,0,0.258355639344024,0.434523000071005,0,0.0636471582781649,0,0.435433495793923,0,5.11875602910865,2.00822175099494,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,2.41528552309231,7.37307532297436 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| ||
|short_description=p1@ENST00000547282 | |short_description=p1@ENST00000547282 | ||
}} | }} |
Latest revision as of 04:39, 24 July 2015
Short description: | p1@ENST00000547282 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000547282_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000547282_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.39e-69 | 24 |
pro-B cell | 4.39e-69 | 24 |
B cell | 8.60e-50 | 14 |
lymphocyte | 1.29e-33 | 53 |
common lymphoid progenitor | 1.29e-33 | 53 |
lymphoid lineage restricted progenitor cell | 2.69e-31 | 52 |
leukocyte | 1.45e-21 | 136 |
nongranular leukocyte | 3.51e-17 | 115 |
hematopoietic stem cell | 7.17e-16 | 168 |
hematopoietic cell | 1.21e-14 | 177 |
plasmacytoid dendritic cell | 8.43e-12 | 3 |
precursor B cell | 2.62e-11 | 3 |
hematopoietic oligopotent progenitor cell | 2.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 3.27e-11 | 120 |
single nucleate cell | 2.50e-10 | 3 |
mononuclear cell | 2.50e-10 | 3 |
mature B cell | 3.41e-08 | 2 |
pre-B-II cell | 3.41e-08 | 2 |
transitional stage B cell | 3.41e-08 | 2 |
small pre-B-II cell | 3.41e-08 | 2 |
immature B cell | 3.41e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.73e-20 | 15 |
haemolymphatic fluid | 2.73e-20 | 15 |
organism substance | 2.73e-20 | 15 |
spleen | 3.12e-11 | 3 |
gastrointestinal system mesentery | 3.12e-11 | 3 |
stomach region | 3.12e-11 | 3 |
mesentery | 3.12e-11 | 3 |
gastrointestinal system serosa | 3.12e-11 | 3 |
mesentery of stomach | 3.12e-11 | 3 |
gut mesentery | 3.12e-11 | 3 |
dorsal mesentery | 3.12e-11 | 3 |
dorsal mesogastrium | 3.12e-11 | 3 |
peritoneal cavity | 3.12e-11 | 3 |
spleen primordium | 3.12e-11 | 3 |
adult organism | 9.75e-08 | 114 |