FFCP PHASE1:Mm9::chr1:34899902..34899910,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214469 | |EntrezGene=214469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XQ8 | |UniProt=Q80XQ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000047534,ENSMUST00000140534_5end | |association_with_transcript=0bp_to_ENSMUST00000047534,ENSMUST00000140534_5end | ||
|cluster_id=chr1:34899902..34899910,- | |||
|description=CAGE_peak_4_at_Fam168b_5end | |description=CAGE_peak_4_at_Fam168b_5end | ||
|id=chr1:34899902..34899910,- | |id=chr1:34899902..34899910,- | ||
|ontology_enrichment_celltype=CL:0000117!1.06e-10!23;CL:0000337!1.06e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23;CL:0000540,5.64e-07,33;CL:0000047,5.64e-07,33;CL:0000031,5.64e-07,33;CL:0000404,5.64e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.06e-17!102;UBERON:0000924!2.06e-17!102;UBERON:0006601!2.06e-17!102;UBERON:0001017!1.25e-16!73;UBERON:0005743!1.25e-16!73;UBERON:0001049!1.55e-16!52;UBERON:0005068!1.55e-16!52;UBERON:0006241!1.55e-16!52;UBERON:0007135!1.55e-16!52;UBERON:0002020!2.54e-16!34;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0000073!1.60e-15!75;UBERON:0001016!1.60e-15!75;UBERON:0002346!1.69e-15!71;UBERON:0003075!1.69e-15!71;UBERON:0007284!1.69e-15!71;UBERON:0002616!2.92e-15!49;UBERON:0000033!7.20e-15!63;UBERON:0002791!7.20e-14!29;UBERON:0003528!7.20e-14!29;UBERON:0001893!7.20e-14!29;UBERON:0003080!7.14e-13!40;UBERON:0003056!1.14e-12!49;UBERON:0002780!2.24e-12!39;UBERON:0001890!2.24e-12!39;UBERON:0006240!2.24e-12!39;UBERON:0000956!6.56e-10!21;UBERON:0001869!6.56e-10!21;UBERON:0000203!6.56e-10!21;UBERON:0007811!1.39e-09!86;UBERON:0000153!4.29e-09!94;UBERON:0002619!4.88e-08!17;UBERON:0002021!4.98e-08!10;UBERON:0000411!4.98e-08!10;UBERON:0001950!4.98e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.78e-20,54;UBERON:0004121,1.29e-19,95;UBERON:0000924,1.29e-19,95;UBERON:0006601,1.29e-19,95;UBERON:0001017,5.29e-19,73;UBERON:0001049,7.09e-19,52;UBERON:0005068,7.09e-19,52;UBERON:0006241,7.09e-19,52;UBERON:0007135,7.09e-19,52;UBERON:0010371,1.99e-18,73;UBERON:0002020,2.37e-18,34;UBERON:0001016,9.04e-18,75;UBERON:0002346,2.13e-17,64;UBERON:0003075,2.13e-17,64;UBERON:0007284,2.13e-17,64;UBERON:0000955,4.68e-16,47;UBERON:0006238,4.68e-16,47;UBERON:0003528,1.60e-15,29;UBERON:0002791,1.60e-15,29;UBERON:0001893,1.60e-15,29;UBERON:0002616,2.21e-15,46;UBERON:0003080,1.52e-14,40;UBERON:0002780,5.68e-14,39;UBERON:0001890,5.68e-14,39;UBERON:0006240,5.68e-14,39;UBERON:0003056,7.61e-14,49;UBERON:0000956,5.78e-11,21;UBERON:0001869,5.78e-11,21;UBERON:0000203,5.78e-11,21;UBERON:0002021,5.01e-09,10;UBERON:0000411,5.01e-09,10;UBERON:0001950,5.01e-09,10;UBERON:0002619,8.19e-09,17;UBERON:0010314,2.88e-08,92 | |||
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| ||
|short_description=p4@Fam168b | |short_description=p4@Fam168b | ||
}} | }} |
Latest revision as of 02:07, 27 September 2015
Short description: | p4@Fam168b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam168b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000047534, ENSMUST00000140534_5end |
EntrezGene: | Fam168b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-11 | 23 |
neuron | 5.64e-07 | 33 |
neuronal stem cell | 5.64e-07 | 33 |
neuroblast | 5.64e-07 | 33 |
electrically signaling cell | 5.64e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.78e-20 | 54 |
ectoderm-derived structure | 1.29e-19 | 95 |
ectoderm | 1.29e-19 | 95 |
presumptive ectoderm | 1.29e-19 | 95 |
central nervous system | 5.29e-19 | 73 |
neural tube | 7.09e-19 | 52 |
neural rod | 7.09e-19 | 52 |
future spinal cord | 7.09e-19 | 52 |
neural keel | 7.09e-19 | 52 |
ecto-epithelium | 1.99e-18 | 73 |
gray matter | 2.37e-18 | 34 |
nervous system | 9.04e-18 | 75 |
neurectoderm | 2.13e-17 | 64 |
neural plate | 2.13e-17 | 64 |
presumptive neural plate | 2.13e-17 | 64 |
brain | 4.68e-16 | 47 |
future brain | 4.68e-16 | 47 |
brain grey matter | 1.60e-15 | 29 |
regional part of telencephalon | 1.60e-15 | 29 |
telencephalon | 1.60e-15 | 29 |
regional part of brain | 2.21e-15 | 46 |
anterior neural tube | 1.52e-14 | 40 |
regional part of forebrain | 5.68e-14 | 39 |
forebrain | 5.68e-14 | 39 |
future forebrain | 5.68e-14 | 39 |
pre-chordal neural plate | 7.61e-14 | 49 |
cerebral cortex | 5.78e-11 | 21 |
cerebral hemisphere | 5.78e-11 | 21 |
pallium | 5.78e-11 | 21 |
occipital lobe | 5.01e-09 | 10 |
visual cortex | 5.01e-09 | 10 |
neocortex | 5.01e-09 | 10 |
regional part of cerebral cortex | 8.19e-09 | 17 |
structure with developmental contribution from neural crest | 2.88e-08 | 92 |