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{{DOID
{{DOID
|id=DOID:225
|alt_id=
|name=syndrome
|namespace=
|def="A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http\://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=syndrome]
|xref=
|is_a=DOID:4
|synonym="syndrome" EXACT [MTH:NOCODE];;"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
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|id=DOID:225
|is_a=DOID:4
|is_obsolete=
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|name=syndrome
|namespace=FANTOM
|obo_creation_date=
|part_of=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="syndrome" EXACT [MTH:NOCODE];;"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]
|union_of=
|xref=MSH:D013577;;NCI:C28193;;SNOMEDCT_2010_1_31:64572001;;UMLS_CUI:C0039082
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:syndrome
Namespace:FANTOM
Definition:"A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book
Xrefs:
links:

MSH:D013577
NCI:C28193
SNOMEDCT_2010_1_31:64572001

UMLS_CUI:C0039082
Synonyms: "syndrome" EXACT [MTH:NOCODE]
"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:4(disease)



Children


is a:FF:10772-110F7 (myelodysplastic syndrome cell line:SKM-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:225 (syndrome), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:56347811..56347816,-#_206d69585da977f3be5cf9c57386d0afp@chr17:56347811..56347816, -
5.42e-195FFCP PHASE1:Hg19::chr17:56347811..56347816,-#_206d69585da977f3be5cf9c57386d0afp@chr17:56347811..56347816, -
5.42e-195FFCP PHASE1:Hg19::chr4:26276979..26276986,-#_206d69585da977f3be5cf9c57386d0afp@chr4:26276979..26276986, -
5.42e-195FFCP PHASE2:Hg19::chr4:26277080..26277081,-#_206d69585da977f3be5cf9c57386d0afp@chr4:26277080..26277081, -
5.42e-195FFCP PHASE2:Hg19::chr4:26276979..26276986,-#_206d69585da977f3be5cf9c57386d0afp@chr4:26276979..26276986, -
5.42e-195FFCP PHASE1:Hg19::chr4:26277080..26277081,-#_206d69585da977f3be5cf9c57386d0afp@chr4:26277080..26277081, -
9.37e-99FFCP PHASE2:Hg19::chr16:89024175..89024185,-#_ee7175025767483ed6bffe966747c50fp@chr16:89024175..89024185, -
9.37e-99FFCP PHASE1:Hg19::chr16:89024175..89024185,-#_ee7175025767483ed6bffe966747c50fp@chr16:89024175..89024185, -
2.55e-98FFCP PHASE2:Hg19::chr19:847992..847997,+#_aa6a042559ca899a992a492a192dae89p@chr19:847992..847997, +
2.55e-98FFCP PHASE2:Hg19::chr5:151323023..151323025,+#_aa6a042559ca899a992a492a192dae89p@chr5:151323023..151323025, +
2.55e-98FFCP PHASE1:Hg19::chr19:856037..856044,+#_aa6a042559ca899a992a492a192dae89p@chr19:856037..856044, +
2.55e-98FFCP PHASE1:Hg19::chr19:847992..847997,+#_aa6a042559ca899a992a492a192dae89p@chr19:847992..847997, +
2.55e-98FFCP PHASE1:Hg19::chr5:151323023..151323025,+#_aa6a042559ca899a992a492a192dae89p@chr5:151323023..151323025, +
2.55e-98FFCP PHASE2:Hg19::chr19:856037..856044,+#_aa6a042559ca899a992a492a192dae89p@chr19:856037..856044, +
1.23e-66FFCP PHASE2:Hg19::chr5:177904789..177904800,+#_a80238ff6f97612e9139c1cd7fae4791p@chr5:177904789..177904800, +
1.23e-66FFCP PHASE1:Hg19::chr5:177904789..177904800,+#_a80238ff6f97612e9139c1cd7fae4791p@chr5:177904789..177904800, +
2.39e-66FFCP PHASE1:Hg19::chr19:855662..855672,+#_2d55ac984b88fc396b94eebbdd7b0d11p6@ELANE
2.39e-66FFCP PHASE1:Hg19::chr10:112206899..112206910,-#_2d55ac984b88fc396b94eebbdd7b0d11p@chr10:112206899..112206910, -
2.39e-66FFCP PHASE2:Hg19::chr10:112206899..112206910,-#_2d55ac984b88fc396b94eebbdd7b0d11p@chr10:112206899..112206910, -
2.39e-66FFCP PHASE2:Hg19::chr19:855662..855672,+#_2d55ac984b88fc396b94eebbdd7b0d11p6@ELANE
4.66e-66FFCP PHASE2:Hg19::chr20:11561982..11561988,-#_04d404e598c37bb7077eeaa1bf01915cp@chr20:11561982..11561988, -
4.66e-66FFCP PHASE1:Hg19::chr20:11561982..11561988,-#_04d404e598c37bb7077eeaa1bf01915cp@chr20:11561982..11561988, -
1.46e-50FFCP PHASE2:Hg19::chr13:105490048..105490074,-#_43ad5596654629faf986cc110b0e1230p@chr13:105490048..105490074, -
1.46e-50FFCP PHASE1:Hg19::chr1:3634835..3634863,+#_43ad5596654629faf986cc110b0e1230p@chr1:3634835..3634863, +
1.46e-50FFCP PHASE1:Hg19::chr13:105490048..105490074,-#_43ad5596654629faf986cc110b0e1230p@chr13:105490048..105490074, -
1.46e-50FFCP PHASE2:Hg19::chr1:3634835..3634863,+#_43ad5596654629faf986cc110b0e1230p@chr1:3634835..3634863, +
2.42e-50FFCP PHASE1:Hg19::chr9:138536853..138536859,+#_d5e5400878da265dbcd9f00c0c87bec6p@chr9:138536853..138536859, +
2.42e-50FFCP PHASE1:Hg19::chr10:31146697..31146708,-#_d5e5400878da265dbcd9f00c0c87bec6p11@ZNF438
2.42e-50FFCP PHASE2:Hg19::chr10:31146697..31146708,-#_d5e5400878da265dbcd9f00c0c87bec6p11@ZNF438
2.42e-50FFCP PHASE2:Hg19::chr9:138536853..138536859,+#_d5e5400878da265dbcd9f00c0c87bec6p@chr9:138536853..138536859, +
3.99e-50FFCP PHASE1:Hg19::chr11:10066331..10066341,-#_d55ca831cb45b16506fb212e991ed310p14@SBF2
3.99e-50FFCP PHASE2:Hg19::chr11:10066331..10066341,-#_d55ca831cb45b16506fb212e991ed310p14@SBF2
6.58e-50FFCP PHASE2:Hg19::chr17:56355359..56355366,+#_dd9808429ad3088d15df64f22d77ef79p@chr17:56355359..56355366, +
6.58e-50FFCP PHASE1:Hg19::chr17:56355359..56355366,+#_dd9808429ad3088d15df64f22d77ef79p@chr17:56355359..56355366, +
6.62e-41FFCP PHASE2:Hg19::chr4:26277042..26277057,-#_09cf958a64a415ddde8e040ea93453dcp@chr4:26277042..26277057, -
6.62e-41FFCP PHASE2:Hg19::chr19:852520..852529,+#_09cf958a64a415ddde8e040ea93453dcp3@ELANE
6.62e-41FFCP PHASE1:Hg19::chr4:26277042..26277057,-#_09cf958a64a415ddde8e040ea93453dcp@chr4:26277042..26277057, -
6.62e-41FFCP PHASE1:Hg19::chr19:852520..852529,+#_09cf958a64a415ddde8e040ea93453dcp3@ELANE
9.91e-41FFCP PHASE1:Hg19::chr5:120617659..120617660,+#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr5:120617659..120617660, +
9.91e-41FFCP PHASE2:Hg19::chr8:129847463..129847467,-#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr8:129847463..129847467, -
9.91e-41FFCP PHASE2:Hg19::chr5:120617659..120617660,+#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr5:120617659..120617660, +
9.91e-41FFCP PHASE1:Hg19::chr8:129847463..129847467,-#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr8:129847463..129847467, -
9.91e-41FFCP PHASE1:Hg19::chr10:102778187..102778193,-#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr10:102778187..102778193, -
9.91e-41FFCP PHASE2:Hg19::chr10:102778187..102778193,-#_1dfc9e3d3d28af907bc7e062cf2feeb4p@chr10:102778187..102778193, -
1.48e-40FFCP PHASE1:Hg19::chr1:220891733..220891744,+#_4f01f89d0d0a31bb363db072657aa80fp@chr1:220891733..220891744, +
1.48e-40FFCP PHASE1:Hg19::chr1:236015352..236015361,-#_4f01f89d0d0a31bb363db072657aa80fp@chr1:236015352..236015361, -
1.48e-40FFCP PHASE2:Hg19::chr7:128002301..128002321,-#_4f01f89d0d0a31bb363db072657aa80fp@chr7:128002301..128002321, -
1.48e-40FFCP PHASE2:Hg19::chr17:56351008..56351018,-#_4f01f89d0d0a31bb363db072657aa80fp@chr17:56351008..56351018, -
1.48e-40FFCP PHASE2:Hg19::chr1:220891733..220891744,+#_4f01f89d0d0a31bb363db072657aa80fp@chr1:220891733..220891744, +
1.48e-40FFCP PHASE1:Hg19::chr17:56351008..56351018,-#_4f01f89d0d0a31bb363db072657aa80fp@chr17:56351008..56351018, -
1.48e-40FFCP PHASE2:Hg19::chr1:236015352..236015361,-#_4f01f89d0d0a31bb363db072657aa80fp@chr1:236015352..236015361, -
1.48e-40FFCP PHASE2:Hg19::chr16:85887549..85887557,+#_4f01f89d0d0a31bb363db072657aa80fp@chr16:85887549..85887557, +
1.48e-40FFCP PHASE1:Hg19::chr16:85887549..85887557,+#_4f01f89d0d0a31bb363db072657aa80fp@chr16:85887549..85887557, +
1.48e-40FFCP PHASE1:Hg19::chr7:128002301..128002321,-#_4f01f89d0d0a31bb363db072657aa80fp@chr7:128002301..128002321, -
2.21e-40FFCP PHASE2:Hg19::chr17:56350797..56350801,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56350797..56350801, -
2.21e-40FFCP PHASE1:Hg19::chr17:56350797..56350801,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56350797..56350801, -
2.21e-40FFCP PHASE2:Hg19::chr17:56347341..56347343,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56347341..56347343, -
2.21e-40FFCP PHASE1:Hg19::chr17:56347341..56347343,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56347341..56347343, -
2.21e-40FFCP PHASE2:Hg19::chr17:56357324..56357333,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56357324..56357333, -
2.21e-40FFCP PHASE1:Hg19::chr17:56357324..56357333,-#_540dc3576d590649e3484e2e36eb8038p@chr17:56357324..56357333, -
3.3e-40FFCP PHASE2:Hg19::chr5:61434588..61434602,-#_422089ffa01cabf3179d7e2505f6f61ep@chr5:61434588..61434602, -
3.3e-40FFCP PHASE2:Hg19::chr3:18004038..18004057,+#_422089ffa01cabf3179d7e2505f6f61ep1@uc003cbg.2
3.3e-40FFCP PHASE1:Hg19::chr5:61434588..61434602,-#_422089ffa01cabf3179d7e2505f6f61ep@chr5:61434588..61434602, -
3.3e-40FFCP PHASE2:Hg19::chr17:56349073..56349082,-#_422089ffa01cabf3179d7e2505f6f61ep@chr17:56349073..56349082, -
3.3e-40FFCP PHASE1:Hg19::chr17:56349073..56349082,-#_422089ffa01cabf3179d7e2505f6f61ep@chr17:56349073..56349082, -
3.3e-40FFCP PHASE1:Hg19::chr3:18004038..18004057,+#_422089ffa01cabf3179d7e2505f6f61ep1@uc003cbg.2
1.84e-34FFCP PHASE2:Hg19::chr19:856179..856196,+#_4a2dc902e4ccabff11c8f54ce3b7eacbp@chr19:856179..856196, +
1.84e-34FFCP PHASE1:Hg19::chr19:856179..856196,+#_4a2dc902e4ccabff11c8f54ce3b7eacbp@chr19:856179..856196, +
2.58e-34FFCP PHASE2:Hg19::chr17:56357123..56357132,-#_db1d1ccbdedd23cd6f35f5318668c1acp@chr17:56357123..56357132, -
2.58e-34FFCP PHASE1:Hg19::chr17:56357123..56357132,-#_db1d1ccbdedd23cd6f35f5318668c1acp@chr17:56357123..56357132, -
2.58e-34FFCP PHASE1:Hg19::chr10:31146746..31146755,-#_db1d1ccbdedd23cd6f35f5318668c1acp14@ZNF438
2.58e-34FFCP PHASE2:Hg19::chr10:31146746..31146755,-#_db1d1ccbdedd23cd6f35f5318668c1acp14@ZNF438
3.61e-34FFCP PHASE1:Hg19::chr3:18020939..18020953,+#_f6bf91f3173fb35ba430c04e936b883ap@chr3:18020939..18020953, +
3.61e-34FFCP PHASE2:Hg19::chr17:56353056..56353065,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56353056..56353065, -
3.61e-34FFCP PHASE2:Hg19::chr13:105490171..105490180,-#_f6bf91f3173fb35ba430c04e936b883ap@chr13:105490171..105490180, -
3.61e-34FFCP PHASE1:Hg19::chr17:56353056..56353065,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56353056..56353065, -
3.61e-34FFCP PHASE2:Hg19::chr8:6810503..6810508,-#_f6bf91f3173fb35ba430c04e936b883ap@chr8:6810503..6810508, -
3.61e-34FFCP PHASE2:Hg19::chr1:243893816..243893826,-#_f6bf91f3173fb35ba430c04e936b883ap@chr1:243893816..243893826, -
3.61e-34FFCP PHASE1:Hg19::chr13:105490171..105490180,-#_f6bf91f3173fb35ba430c04e936b883ap@chr13:105490171..105490180, -
3.61e-34FFCP PHASE2:Hg19::chr17:56352942..56352955,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56352942..56352955, -
3.61e-34FFCP PHASE1:Hg19::chr17:56352942..56352955,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56352942..56352955, -
3.61e-34FFCP PHASE2:Hg19::chr3:18020939..18020953,+#_f6bf91f3173fb35ba430c04e936b883ap@chr3:18020939..18020953, +
3.61e-34FFCP PHASE2:Hg19::chr17:56356693..56356700,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56356693..56356700, -
3.61e-34FFCP PHASE1:Hg19::chr8:6810503..6810508,-#_f6bf91f3173fb35ba430c04e936b883ap@chr8:6810503..6810508, -
3.61e-34FFCP PHASE1:Hg19::chr17:56356693..56356700,-#_f6bf91f3173fb35ba430c04e936b883ap@chr17:56356693..56356700, -
3.61e-34FFCP PHASE1:Hg19::chr1:243893816..243893826,-#_f6bf91f3173fb35ba430c04e936b883ap@chr1:243893816..243893826, -
5.05e-34FFCP PHASE2:Hg19::chr17:56357337..56357342,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357337..56357342, -
5.05e-34FFCP PHASE2:Hg19::chr17:56353028..56353052,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56353028..56353052, -
5.05e-34FFCP PHASE1:Hg19::chr17:56353028..56353052,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56353028..56353052, -
5.05e-34FFCP PHASE1:Hg19::chr17:56357337..56357342,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357337..56357342, -
5.05e-34FFCP PHASE2:Hg19::chr17:56357347..56357357,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357347..56357357, -
5.05e-34FFCP PHASE1:Hg19::chr17:56357347..56357357,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357347..56357357, -
5.05e-34FFCP PHASE2:Hg19::chr17:56357304..56357313,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357304..56357313, -
5.05e-34FFCP PHASE1:Hg19::chr17:56357304..56357313,-#_8419e89dd8293be6548910f2e17c8f05p@chr17:56357304..56357313, -
9.85e-34FFCP PHASE1:Hg19::chr19:834523..834536,+#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr19:834523..834536, +
9.85e-34FFCP PHASE2:Hg19::chr17:56348026..56348034,-#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr17:56348026..56348034, -
9.85e-34FFCP PHASE1:Hg19::chr17:56348026..56348034,-#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr17:56348026..56348034, -
9.85e-34FFCP PHASE2:Hg19::chr14:65293634..65293654,-#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr14:65293634..65293654, -
9.85e-34FFCP PHASE2:Hg19::chr19:834523..834536,+#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr19:834523..834536, +
9.85e-34FFCP PHASE2:Hg19::chr18:61568727..61568742,+#_cd2a14b85b2fa705cfb9fe6e7d0a6740p@chr18:61568727..61568742, +

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