FFCP PHASE1:Mm9::chr1:193041811..193041838,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11910 | |EntrezGene=11910 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_uc011wyt.1_5end | |association_with_transcript=79bp_to_uc011wyt.1_5end | ||
|cluster_id=chr1:193041811..193041838,- | |||
|description=CAGE_peak_2_at_Atf3_5end | |description=CAGE_peak_2_at_Atf3_5end | ||
|id=chr1:193041811..193041838,- | |id=chr1:193041811..193041838,- | ||
|ontology_enrichment_celltype=CL:0000107!4.13e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.56e-16,9;CL:0000217,8.36e-13,2;CL:0000328,8.36e-13,2;CL:0002573,8.36e-13,2;CL:0002376,8.36e-13,2;CL:0000218,8.36e-13,2;CL:0000692,8.36e-13,2;CL:0002377,8.36e-13,2;CL:0002375,8.36e-13,2;CL:0000215,7.76e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.29e-14!11;UBERON:0002410!4.13e-10!9;UBERON:0000011!4.77e-09!3;UBERON:0005418!5.43e-08!5;UBERON:0002472!5.43e-08!5;UBERON:0008784!5.43e-08!5;UBERON:0006058!5.43e-08!5;UBERON:0004709!5.43e-08!5;UBERON:0005420!5.43e-08!5;UBERON:0006057!5.43e-08!5;UBERON:0000978!5.43e-08!5;UBERON:0002103!5.43e-08!5;UBERON:0000376!5.43e-08!5;UBERON:0000154!5.43e-08!5;UBERON:0005730!5.43e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.70e-26,11;UBERON:0000011,3.93e-19,3;UBERON:0002410,1.56e-16,9;UBERON:0000013,1.73e-08,3;UBERON:0001374,8.26e-07,1;UBERON:0004252,8.26e-07,1;UBERON:0003663,8.26e-07,1;UBERON:0005090,8.26e-07,1;UBERON:0001630,8.26e-07,1;UBERON:0003661,8.26e-07,1;UBERON:0010890,8.26e-07,1;UBERON:0001383,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48340489332647,11.4113055761246,0,0,17.6792546764015,0,0,0,4.77511028447956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0.441683036920787,0,0,0,0,0,4.55297473122497,0,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0.430846795465598,4.77937595905104,21.1658740378274,28.8738061404609,0,1.75353514746787,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,15.9779724194224,10.3564074719507,9.67399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48340489332647,11.4113055761246,0,0,17.6792546764015,0,0,0,4.77511028447956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0.441683036920787,0,0,0,0,0,4.55297473122497,0,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0.430846795465598,4.77937595905104,21.1658740378274,28.8738061404609,0,1.75353514746787,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,15.9779724194224,10.3564074719507,9.67399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0.57386499620653,0,0 | ||
|short_description=p2@Atf3 | |short_description=p2@Atf3 | ||
}} | }} |
Latest revision as of 00:06, 27 September 2015
Short description: | p2@Atf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_uc011wyt.1_5end |
EntrezGene: | Atf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.56e-16 | 9 |
insulating cell | 8.36e-13 | 2 |
myelin accumulating cell | 8.36e-13 | 2 |
Schwann cell | 8.36e-13 | 2 |
non-myelinating Schwann cell | 8.36e-13 | 2 |
myelinating Schwann cell;;Schwann cell | 8.36e-13 | 2 |
terminal Schwann cell | 8.36e-13 | 2 |
immature Schwann cell | 8.36e-13 | 2 |
Schwann cell precursor | 8.36e-13 | 2 |
barrier cell | 7.76e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.70e-26 | 11 |
parasympathetic nervous system | 3.93e-19 | 3 |
autonomic nervous system | 1.56e-16 | 9 |
sympathetic nervous system | 1.73e-08 | 3 |
biceps femoris | 8.26e-07 | 1 |
hindlimb stylopod muscle | 8.26e-07 | 1 |
hindlimb muscle | 8.26e-07 | 1 |
muscle structure | 8.26e-07 | 1 |
muscle organ | 8.26e-07 | 1 |
limb muscle | 8.26e-07 | 1 |
pelvic complex muscle | 8.26e-07 | 1 |
muscle of leg | 8.26e-07 | 1 |