FFCP PHASE1:Hg19::chr12:102091093..102091104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56994 | |EntrezGene=56994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17852 | |HGNC=17852 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUD6 | |UniProt=Q8WUD6 | ||
|association_with_transcript=-300bp_to_ENST00000229266_5end | |association_with_transcript=-300bp_to_ENST00000229266_5end | ||
|cluster_id=chr12:102091093..102091104,+ | |||
|description=CAGE_peak_13_at_CHPT1_5end | |description=CAGE_peak_13_at_CHPT1_5end | ||
|id=chr12:102091093..102091104,+ | |id=chr12:102091093..102091104,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.11e-11!10;CL:0000541!1.11e-11!10;CL:0000147!3.34e-10!14;CL:0002567!1.42e-08!3;CL:0002274!6.60e-07!5;CL:0000457!6.60e-07!5;CL:0002191!6.60e-07!5;CL:0000097!6.60e-07!5;CL:0000831!6.60e-07!5;CL:0002028!6.60e-07!5 | |ontology_enrichment_celltype=CL:0000148!1.11e-11!10;CL:0000541!1.11e-11!10;CL:0000147!3.34e-10!14;CL:0002567!1.42e-08!3;CL:0002274!6.60e-07!5;CL:0000457!6.60e-07!5;CL:0002191!6.60e-07!5;CL:0000097!6.60e-07!5;CL:0000831!6.60e-07!5;CL:0002028!6.60e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.28e-84;3!CL:0000148;1.98e-45;10!CL:0000147;1.13e-32;14!CL:0000710;4.44e-23;20!CL:0000075;2.94e-17;27!CL:0002077;1.38e-12;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.71e-84,3;CL:0000148,3.13e-45,10;CL:0000541,3.13e-45,10;CL:0000147,1.58e-32,14;CL:0000710,5.58e-23,20;CL:0000075,3.48e-17,27;CL:0002077,9.18e-14,34;CL:0000333,5.44e-11,41;CL:0000133,7.01e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.48e-25!57;UBERON:0005068!7.48e-25!57;UBERON:0006241!7.48e-25!57;UBERON:0007135!7.48e-25!57;UBERON:0002616!9.77e-24!59;UBERON:0007023!1.49e-23!115;UBERON:0005743!1.63e-21!86;UBERON:0001893!4.08e-21!34;UBERON:0002020!5.11e-21!34;UBERON:0003528!5.11e-21!34;UBERON:0002780!1.62e-20!41;UBERON:0001890!1.62e-20!41;UBERON:0006240!1.62e-20!41;UBERON:0001869!1.67e-20!32;UBERON:0000955!2.18e-20!69;UBERON:0006238!2.18e-20!69;UBERON:0001017!4.38e-20!82;UBERON:0003080!6.88e-20!42;UBERON:0002791!1.68e-19!33;UBERON:0003075!1.23e-18!86;UBERON:0007284!1.23e-18!86;UBERON:0000073!1.37e-18!94;UBERON:0001016!1.37e-18!94;UBERON:0002346!2.07e-17!90;UBERON:0002619!1.32e-16!22;UBERON:0003056!1.79e-14!61;UBERON:0000956!2.97e-14!25;UBERON:0000203!2.97e-14!25;UBERON:0000033!2.43e-13!123;UBERON:0001950!2.98e-13!20;UBERON:0000153!2.72e-12!129;UBERON:0007811!2.72e-12!129;UBERON:0000200!4.61e-10!6;UBERON:0004121!8.06e-10!169;UBERON:0000924!2.26e-09!173;UBERON:0006601!2.26e-09!173;UBERON:0002308!1.99e-08!9;UBERON:0000125!1.99e-08!9;UBERON:0004733!4.32e-08!12;UBERON:0002028!4.32e-08!12;UBERON:0007277!4.32e-08!12;UBERON:0004732!2.21e-07!13;UBERON:0002021!2.64e-07!5;UBERON:0000025!5.55e-07!194;UBERON:0000988!5.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.78e-15;2!UBERON:0003022;1.78e-15;2!UBERON:0002421;1.78e-15;2!UBERON:0002600;1.78e-15;2!UBERON:0002021;5.70e-07;5!UBERON:0000349;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.54e-15,2;UBERON:0003022,1.54e-15,2;UBERON:0002421,1.54e-15,2;UBERON:0002600,1.54e-15,2;UBERON:0000349,5.38e-07,5;UBERON:0002021,5.70e-07,5 | |||
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| ||
|short_description=p13@CHPT1 | |short_description=p13@CHPT1 | ||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p13@CHPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CHPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -300bp_to_ENST00000229266_5end |
EntrezGene: | CHPT1 |
HGNC: | 17852 |
UniProt: | Q8WUD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.71e-84 | 3 |
melanocyte | 3.13e-45 | 10 |
melanoblast | 3.13e-45 | 10 |
pigment cell | 1.58e-32 | 14 |
neurecto-epithelial cell | 5.58e-23 | 20 |
columnar/cuboidal epithelial cell | 3.48e-17 | 27 |
ecto-epithelial cell | 9.18e-14 | 34 |
migratory neural crest cell | 5.44e-11 | 41 |
neurectodermal cell | 7.01e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.54e-15 | 2 |
lobe parts of cerebral cortex | 1.54e-15 | 2 |
hippocampal formation | 1.54e-15 | 2 |
limbic lobe | 1.54e-15 | 2 |
limbic system | 5.38e-07 | 5 |
occipital lobe | 5.70e-07 | 5 |