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{{DOID
{{DOID
|id=DOID:1612
|name=breast cancer
|namespace=
|def="A thoracic cancer that originates in the mammary gland." [url:http\://en.wikipedia.org/wiki/Mammary_tumor]
|xref=
|is_a=DOID:5093
|synonym="breast cancer" EXACT [];;"breast tumor" EXACT [NCI2004_11_17:C2910];;"Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006];;"malignant neoplasm of breast" EXACT [];;"malignant tumor of the breast" EXACT [NCI2004_11_17:C9335];;"mammary cancer" EXACT [];;"mammary neoplasm" RELATED [];;"mammary tumor" EXACT [CSP2005:2016-0671];;"primary breast cancer" EXACT []
|comment=
|alt_id=DOID:1648;;DOID:4241
|alt_id=DOID:1648;;DOID:4241
|disjoint_from=
|comment=OMIM mapping confirmed by DO. [SN].
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A thoracic cancer that originates in the mammary gland." [url:http://en.wikipedia.org/wiki/Mammary_tumor]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:1612
|is_a=DOID:5093
|is_obsolete=
|located_in=
|located_in=
|name=breast cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="breast cancer" EXACT [];;"breast tumor" EXACT [NCI2004_11_17:C2910];;"Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006];;"malignant neoplasm of breast" EXACT [];;"malignant tumor of the breast" EXACT [NCI2004_11_17:C9335];;"mammary cancer" EXACT [];;"mammary neoplasm" RELATED [];;"mammary tumor" EXACT [CSP2005:2016-0671];;"primary breast cancer" EXACT []
|union_of=
|xref=MSH:D001943;;NCI:C9335;;OMIM:114480;;SNOMEDCT_2010_1_31:126926005;;SNOMEDCT_2010_1_31:154521006;;SNOMEDCT_2010_1_31:190121004;;SNOMEDCT_2010_1_31:254837009;;SNOMEDCT_2010_1_31:269595005;;UMLS_CUI:C0006142;;UMLS_CUI:C0153555;;UMLS_CUI:C1458155
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:breast cancer
Namespace:FANTOM
Definition:"A thoracic cancer that originates in the mammary gland." [url:http://en.wikipedia.org/wiki/Mammary_tumor]
Xrefs:
links:

MSH:D001943
NCI:C9335
OMIM:114480
SNOMEDCT_2010_1_31:126926005
SNOMEDCT_2010_1_31:154521006
SNOMEDCT_2010_1_31:190121004
SNOMEDCT_2010_1_31:254837009
SNOMEDCT_2010_1_31:269595005
UMLS_CUI:C0006142
UMLS_CUI:C0153555

UMLS_CUI:C1458155
Synonyms: "breast cancer" EXACT []
"breast tumor" EXACT [NCI2004_11_17:C2910]
"Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006]
"malignant neoplasm of breast" EXACT []
"malignant tumor of the breast" EXACT [NCI2004_11_17:C9335]
"mammary cancer" EXACT []
"mammary neoplasm" RELATED []
"mammary tumor" EXACT [CSP2005:2016-0671]
"primary breast cancer" EXACT []
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:1648
DOID:4241

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:5093(thoracic cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1612 (breast cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data