DOID:1612: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:1612
|name=breast cancer
|namespace=
|def="A thoracic cancer that originates in the mammary gland." [url:http\://en.wikipedia.org/wiki/Mammary_tumor]
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{{DOID | {{DOID | ||
|alt_id=DOID:1648;;DOID:4241 | |alt_id=DOID:1648;;DOID:4241 | ||
| | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def="A thoracic cancer that originates in the mammary gland." [url:http://en.wikipedia.org/wiki/Mammary_tumor] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:1612 | |||
|is_a=DOID:5093 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=breast cancer | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|subset= | |||
|synonym="breast cancer" EXACT [];;"breast tumor" EXACT [NCI2004_11_17:C2910];;"Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006];;"malignant neoplasm of breast" EXACT [];;"malignant tumor of the breast" EXACT [NCI2004_11_17:C9335];;"mammary cancer" EXACT [];;"mammary neoplasm" RELATED [];;"mammary tumor" EXACT [CSP2005:2016-0671];;"primary breast cancer" EXACT [] | |||
|union_of= | |||
|xref=MSH:D001943;;NCI:C9335;;OMIM:114480;;SNOMEDCT_2010_1_31:126926005;;SNOMEDCT_2010_1_31:154521006;;SNOMEDCT_2010_1_31:190121004;;SNOMEDCT_2010_1_31:254837009;;SNOMEDCT_2010_1_31:269595005;;UMLS_CUI:C0006142;;UMLS_CUI:C0153555;;UMLS_CUI:C1458155 | |||
}} | }} |
Latest revision as of 16:49, 12 September 2014
Name: | breast cancer | |
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Namespace: | FANTOM | |
Definition: | "A thoracic cancer that originates in the mammary gland." [url:http://en.wikipedia.org/wiki/Mammary_tumor] | |
Xrefs: |
| |
Synonyms: |
"breast cancer" EXACT [] "breast tumor" EXACT [NCI2004_11_17:C2910] "Ca breast - NOS" EXACT [SNOMEDCT_2005_07_31:154521006] "malignant neoplasm of breast" EXACT [] "malignant tumor of the breast" EXACT [NCI2004_11_17:C9335] "mammary cancer" EXACT [] "mammary neoplasm" RELATED [] "mammary tumor" EXACT [CSP2005:2016-0671] "primary breast cancer" EXACT [] | |
Comments: | OMIM mapping confirmed by DO. [SN]. | |
Alt_id: |
DOID:1648 DOID:4241 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:5093(thoracic cancer) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10779-110G5
- 13031-139E7 (MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep1)
- 13032-139E8 (MCF7 breast cancer cell line response to EGF1)
- 13033-139E9 (MCF7 breast cancer cell line response to EGF1)
- 13034-139F1 (MCF7 breast cancer cell line response to EGF1)
- 13035-139F2 (MCF7 breast cancer cell line response to EGF1)
- 13036-139F3 (MCF7 breast cancer cell line response to EGF1)
- 13037-139F4 (MCF7 breast cancer cell line response to EGF1)
... further results Mouse (Mus musculus)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10779-110G5
- 13031-139E7 (MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep1)
- 13032-139E8 (MCF7 breast cancer cell line response to EGF1)
- 13033-139E9 (MCF7 breast cancer cell line response to EGF1)
- 13034-139F1 (MCF7 breast cancer cell line response to EGF1)
- 13035-139F2 (MCF7 breast cancer cell line response to EGF1)
- 13036-139F3 (MCF7 breast cancer cell line response to EGF1)
- 13037-139F4 (MCF7 breast cancer cell line response to EGF1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1612 (breast cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data