FFCP PHASE1:Mm9::chr16:20695090..20695102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78408 | |EntrezGene=78408 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BWU3 | |UniProt=Q8BWU3 | ||
|association_with_transcript=-27bp_to_NM_133778,uc007yqx.1_5end | |association_with_transcript=-27bp_to_NM_133778,uc007yqx.1_5end | ||
|cluster_id=chr16:20695090..20695102,+ | |||
|description=CAGE_peak_5_at_Fam131a_5end | |description=CAGE_peak_5_at_Fam131a_5end | ||
|id=chr16:20695090..20695102,+ | |id=chr16:20695090..20695102,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.82e-09,3;CL:0000239,1.17e-07,6;CL:0000677,1.17e-07,6;CL:0000584,1.17e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.45e-12!17;UBERON:0000956!2.97e-12!21;UBERON:0001869!2.97e-12!21;UBERON:0000203!2.97e-12!21;UBERON:0002791!4.48e-11!29;UBERON:0003528!4.48e-11!29;UBERON:0001893!4.48e-11!29;UBERON:0000955!1.00e-10!50;UBERON:0006238!1.00e-10!50;UBERON:0002020!1.35e-10!34;UBERON:0002780!1.67e-10!39;UBERON:0001890!1.67e-10!39;UBERON:0006240!1.67e-10!39;UBERON:0002616!2.17e-10!49;UBERON:0002021!5.79e-10!10;UBERON:0000411!5.79e-10!10;UBERON:0001950!5.79e-10!10;UBERON:0003080!5.85e-10!40;UBERON:0001049!2.59e-09!52;UBERON:0005068!2.59e-09!52;UBERON:0006241!2.59e-09!52;UBERON:0007135!2.59e-09!52;UBERON:0000033!1.58e-08!63;UBERON:0003056!2.21e-08!49;UBERON:0001017!4.07e-07!73;UBERON:0005743!4.07e-07!73;UBERON:0002346!5.93e-07!71;UBERON:0003075!5.93e-07!71;UBERON:0007284!5.93e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.65e-30,10;UBERON:0000411,2.65e-30,10;UBERON:0001950,2.65e-30,10;UBERON:0002619,1.24e-24,17;UBERON:0000956,6.63e-23,21;UBERON:0001869,6.63e-23,21;UBERON:0000203,6.63e-23,21;UBERON:0003528,4.72e-21,29;UBERON:0002791,4.72e-21,29;UBERON:0001893,4.72e-21,29;UBERON:0002020,1.80e-17,34;UBERON:0002780,5.36e-17,39;UBERON:0001890,5.36e-17,39;UBERON:0006240,5.36e-17,39;UBERON:0003080,1.75e-16,40;UBERON:0002616,7.12e-14,46;UBERON:0000955,1.67e-13,47;UBERON:0006238,1.67e-13,47;UBERON:0000073,8.18e-13,54;UBERON:0003056,8.25e-13,49;UBERON:0001049,7.21e-12,52;UBERON:0005068,7.21e-12,52;UBERON:0006241,7.21e-12,52;UBERON:0007135,7.21e-12,52;UBERON:0001017,1.14e-09,73;UBERON:0001016,2.62e-09,75;UBERON:0002346,5.41e-09,64;UBERON:0003075,5.41e-09,64;UBERON:0007284,5.41e-09,64;UBERON:0010371,1.83e-07,73 | |||
|phase1_expression=0.320297694209588,3.14077866875425,2.72999543633722,0,0,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.799962113967033,2.06468352960453,2.8711598205751,5.59990595006797,3.878482188346,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,2.63623419281366,0.388859798148567,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.766124028511126,1.38245879930619,0,0,0,0.279182999001381,0.56276261003168,2.44477196442896,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.970601099684455,0.883366073841574,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0,2.28750301409313,0,5.9100268865374,10.4843337505436,0.83115217823824,3.56930778749067,0.203678727700633,0.124406970610093,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.162137619091711,0.292399974850665,0.658650345873152,0.402619256281115,16.1923260394378,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0,0.849892149969277,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,9.66682996665071,7.44764167471216,7.90524638780963,6.16574267793578,9.06472676867641,9.45031500324528,10.8077088773813,6.79713613476307,9.83744592328458,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0,0.887379030796687,0,0.436039249896986,0.564656282491984,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,0,0.593175090620871,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,3.14077866875425,2.72999543633722,0,0,1.6787927191189,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0.799962113967033,2.06468352960453,2.8711598205751,5.59990595006797,3.878482188346,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,2.63623419281366,0.388859798148567,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.766124028511126,1.38245879930619,0,0,0,0.279182999001381,0.56276261003168,2.44477196442896,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0.970601099684455,0.883366073841574,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0,2.28750301409313,0,5.9100268865374,10.4843337505436,0.83115217823824,3.56930778749067,0.203678727700633,0.124406970610093,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.656669856316381,0.162137619091711,0.292399974850665,0.658650345873152,0.402619256281115,16.1923260394378,0.823236899034275,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0,0,0,0,0,0.849892149969277,0.279902904647316,0.414599921413271,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,9.66682996665071,7.44764167471216,7.90524638780963,6.16574267793578,9.06472676867641,9.45031500324528,10.8077088773813,6.79713613476307,9.83744592328458,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0,0.887379030796687,0,0.436039249896986,0.564656282491984,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,0,0.593175090620871,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0.661774257358546,0.463735671240843 | ||
|short_description=p5@Fam131a | |short_description=p5@Fam131a | ||
}} | }} |
Latest revision as of 18:09, 1 October 2015
Short description: | p5@Fam131a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam131a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -27bp_to_NM_133778, uc007yqx.1_5end |
EntrezGene: | Fam131a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.82e-09 | 3 |
brush border epithelial cell | 1.17e-07 | 6 |
gut absorptive cell | 1.17e-07 | 6 |
enterocyte | 1.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.65e-30 | 10 |
visual cortex | 2.65e-30 | 10 |
neocortex | 2.65e-30 | 10 |
regional part of cerebral cortex | 1.24e-24 | 17 |
cerebral cortex | 6.63e-23 | 21 |
cerebral hemisphere | 6.63e-23 | 21 |
pallium | 6.63e-23 | 21 |
brain grey matter | 4.72e-21 | 29 |
regional part of telencephalon | 4.72e-21 | 29 |
telencephalon | 4.72e-21 | 29 |
gray matter | 1.80e-17 | 34 |
regional part of forebrain | 5.36e-17 | 39 |
forebrain | 5.36e-17 | 39 |
future forebrain | 5.36e-17 | 39 |
anterior neural tube | 1.75e-16 | 40 |
regional part of brain | 7.12e-14 | 46 |
brain | 1.67e-13 | 47 |
future brain | 1.67e-13 | 47 |
regional part of nervous system | 8.18e-13 | 54 |
pre-chordal neural plate | 8.25e-13 | 49 |
neural tube | 7.21e-12 | 52 |
neural rod | 7.21e-12 | 52 |
future spinal cord | 7.21e-12 | 52 |
neural keel | 7.21e-12 | 52 |
central nervous system | 1.14e-09 | 73 |
nervous system | 2.62e-09 | 75 |
neurectoderm | 5.41e-09 | 64 |
neural plate | 5.41e-09 | 64 |
presumptive neural plate | 5.41e-09 | 64 |
ecto-epithelium | 1.83e-07 | 73 |