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Latest revision as of 16:31, 26 June 2012

Name:organ system benign neoplasm
Namespace:disease_ontology
Created by:lschriml
Creation date:2011-07-14T12:12:23Z

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0060072(benign neoplasm)



Children


is a:DOID:0060121 (integumentary system benign neoplasm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Mouse (Mus musculus)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060085 (organ system benign neoplasm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_6f5abc4a811863e2f6e1fa92df7dd074p@chr11:101742272..101742276, -
5.42e-195FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_6f5abc4a811863e2f6e1fa92df7dd074p1@CU687665
5.42e-195FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_6f5abc4a811863e2f6e1fa92df7dd074p1@CU687665
5.42e-195FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_6f5abc4a811863e2f6e1fa92df7dd074p@chr11:101742272..101742276, -
9.37e-99FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr5:14034644..14034647, -
9.37e-99FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr11:81551043..81551054, -
9.37e-99FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr5:14034644..14034647, -
9.37e-99FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr18:71197490..71197495, -
9.37e-99FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr18:71197490..71197495, -
9.37e-99FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr11:81551043..81551054, -
9.37e-99FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_fdf1ffed4fb0fe230ce0a5c4f33348bbp@chr16:51670868..51670880, -
2.55e-98FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_1792c267fd5965ea84b4fe41de37dd7cp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr3:45174403..45174415, +
2.55e-98FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr5:23952305..23952310, +
2.55e-98FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_1792c267fd5965ea84b4fe41de37dd7cp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr3:45174403..45174415, +
2.55e-98FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_1792c267fd5965ea84b4fe41de37dd7cp@chr5:23952305..23952310, +
1.23e-66FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_f173a48fdb38f7787dad0f8db82a738bp1@ENST00000508790
1.23e-66FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_f173a48fdb38f7787dad0f8db82a738bp@chr7:119353807..119353812, -
1.23e-66FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_f173a48fdb38f7787dad0f8db82a738bp1@ENST00000508790
1.23e-66FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_f173a48fdb38f7787dad0f8db82a738bp@chr7:119353807..119353812, -
2.39e-66FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_68f4efde98b31ca1f442920d3b96c5b7p1@USP26
2.39e-66FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_68f4efde98b31ca1f442920d3b96c5b7p@chr8:15939682..15939688, +
2.39e-66FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_68f4efde98b31ca1f442920d3b96c5b7p@chr10:37004821..37004852, -
2.39e-66FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_68f4efde98b31ca1f442920d3b96c5b7p@chr8:15939682..15939688, +
2.39e-66FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_68f4efde98b31ca1f442920d3b96c5b7p1@USP26
2.39e-66FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_68f4efde98b31ca1f442920d3b96c5b7p@chr10:37004821..37004852, -
4.66e-66FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_168a21a43ac50a8206c00701c48c5a26p@chr11:84019133..84019135, -
4.66e-66FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_168a21a43ac50a8206c00701c48c5a26p@chr11:84019133..84019135, -
1.46e-50FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_36381f63277f2fb90281ad3ab90cccdep@chr11:81549961..81549965, -
1.46e-50FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_36381f63277f2fb90281ad3ab90cccdep@chr5:27723923..27723927, -
1.46e-50FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_36381f63277f2fb90281ad3ab90cccdep@chr11:81549961..81549965, -
1.46e-50FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_36381f63277f2fb90281ad3ab90cccdep@chr5:27723923..27723927, -
2.42e-50FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_55c78571532ea168ab0a490eae7b6eb4p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_55c78571532ea168ab0a490eae7b6eb4p1@TFDP3
2.42e-50FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_55c78571532ea168ab0a490eae7b6eb4p@chrX:124347061..124347063, -
2.42e-50FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_55c78571532ea168ab0a490eae7b6eb4p1@TFDP3
2.42e-50FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_55c78571532ea168ab0a490eae7b6eb4p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_55c78571532ea168ab0a490eae7b6eb4p@chrX:124347061..124347063, -
6.58e-50FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_872e15b3792b90ed36e3221d74197589p@chr7:12997533..12997536, +
6.58e-50FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_872e15b3792b90ed36e3221d74197589p@chr7:12997533..12997536, +
6.62e-41FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_cac658354368efe87de739f525cf18f4p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_cac658354368efe87de739f525cf18f4p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_cac658354368efe87de739f525cf18f4p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_cac658354368efe87de739f525cf18f4p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_cac658354368efe87de739f525cf18f4p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_cac658354368efe87de739f525cf18f4p@chr5:27742047..27742052, -
9.91e-41FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_dab83843269c32f67f9c21db5109c89ep3@ZNF812
9.91e-41FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_dab83843269c32f67f9c21db5109c89ep@chr9:118595109..118595124, +
9.91e-41FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_dab83843269c32f67f9c21db5109c89ep@chr13:87732242..87732246, -
9.91e-41FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_dab83843269c32f67f9c21db5109c89ep@chr9:118595109..118595124, +
9.91e-41FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_dab83843269c32f67f9c21db5109c89ep3@ZNF812
9.91e-41FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_dab83843269c32f67f9c21db5109c89ep@chr13:87732242..87732246, -
1.48e-40FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_22a552303f6f0a506adb6b1662980076p2@SPANXC
1.48e-40FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_22a552303f6f0a506adb6b1662980076p2@SPANXC
3.3e-40FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_393a8d6178fb799ea7ba372254faa7f3p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_393a8d6178fb799ea7ba372254faa7f3p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_393a8d6178fb799ea7ba372254faa7f3p@chr18:63273310..63273317, +
3.3e-40FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_393a8d6178fb799ea7ba372254faa7f3p@chr18:63273310..63273317, +
3.3e-40FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_393a8d6178fb799ea7ba372254faa7f3p@chr11:28792916..28792929, +
3.3e-40FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_393a8d6178fb799ea7ba372254faa7f3p@chr3:60761167..60761179, +
3.3e-40FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_393a8d6178fb799ea7ba372254faa7f3p@chr8:76774227..76774234, +
3.3e-40FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_393a8d6178fb799ea7ba372254faa7f3p@chr8:76774227..76774234, +
1.84e-34FFCP PHASE2:Hg19::chr13:87778457..87778464,+#_716b214ff85c366c738fac4d4cbc55ffp@chr13:87778457..87778464, +
1.84e-34FFCP PHASE2:Hg19::chr3:94657049..94657061,+#_716b214ff85c366c738fac4d4cbc55ffp1@ENST00000462219
1.84e-34FFCP PHASE1:Hg19::chr3:94657049..94657061,+#_716b214ff85c366c738fac4d4cbc55ffp1@ENST00000462219
1.84e-34FFCP PHASE1:Hg19::chr13:87778457..87778464,+#_716b214ff85c366c738fac4d4cbc55ffp@chr13:87778457..87778464, +
3.61e-34FFCP PHASE1:Hg19::chrX:148793752..148793763,+#_326bb8cc150a3f4dd821b825862048f4p3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr3:79552183..79552188,+#_326bb8cc150a3f4dd821b825862048f4p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chrX:148793752..148793763,+#_326bb8cc150a3f4dd821b825862048f4p3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr8:88823985..88824001,-#_326bb8cc150a3f4dd821b825862048f4p@chr8:88823985..88824001, -
3.61e-34FFCP PHASE2:Hg19::chr3:79552183..79552188,+#_326bb8cc150a3f4dd821b825862048f4p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chr8:88823985..88824001,-#_326bb8cc150a3f4dd821b825862048f4p@chr8:88823985..88824001, -
5.05e-34FFCP PHASE2:Hg19::chr7:22136603..22136614,+#_1462b44b56cdb32479c87341b1668673p@chr7:22136603..22136614, +
5.05e-34FFCP PHASE1:Hg19::chr6:66708902..66708907,-#_1462b44b56cdb32479c87341b1668673p@chr6:66708902..66708907, -
5.05e-34FFCP PHASE2:Hg19::chr6:66708902..66708907,-#_1462b44b56cdb32479c87341b1668673p@chr6:66708902..66708907, -
5.05e-34FFCP PHASE1:Hg19::chr7:22136603..22136614,+#_1462b44b56cdb32479c87341b1668673p@chr7:22136603..22136614, +
7.06e-34FFCP PHASE1:Hg19::chr19:54545833..54545844,-#_eb355643249985c4df04503275f583cap@chr19:54545833..54545844, -
7.06e-34FFCP PHASE2:Hg19::chr17:53535935..53535939,+#_eb355643249985c4df04503275f583cap@chr17:53535935..53535939, +
7.06e-34FFCP PHASE1:Hg19::chr17:53535935..53535939,+#_eb355643249985c4df04503275f583cap@chr17:53535935..53535939, +
7.06e-34FFCP PHASE2:Hg19::chr19:54545833..54545844,-#_eb355643249985c4df04503275f583cap@chr19:54545833..54545844, -
9.85e-34FFCP PHASE1:Hg19::chr10:2357481..2357493,+#_72ad8ae99eff0aebe3bdd7eb49908afap@chr10:2357481..2357493, +
9.85e-34FFCP PHASE2:Hg19::chr10:2357481..2357493,+#_72ad8ae99eff0aebe3bdd7eb49908afap@chr10:2357481..2357493, +
9.99e-30FFCP PHASE1:Hg19::chr3:55313580..55313599,-#_386dfe4830dbd57faf5e3f149604690ep@chr3:55313580..55313599, -
9.99e-30FFCP PHASE1:Hg19::chrX:141290299..141290303,-#_386dfe4830dbd57faf5e3f149604690ep@chrX:141290299..141290303, -
9.99e-30FFCP PHASE1:Hg19::chr20:26116623..26116634,+#_386dfe4830dbd57faf5e3f149604690ep@chr20:26116623..26116634, +
9.99e-30FFCP PHASE2:Hg19::chr13:87781278..87781282,+#_386dfe4830dbd57faf5e3f149604690ep@chr13:87781278..87781282, +
9.99e-30FFCP PHASE2:Hg19::chr21:17726230..17726234,+#_386dfe4830dbd57faf5e3f149604690ep@chr21:17726230..17726234, +
9.99e-30FFCP PHASE2:Hg19::chrX:141290299..141290303,-#_386dfe4830dbd57faf5e3f149604690ep@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr3:55313580..55313599,-#_386dfe4830dbd57faf5e3f149604690ep@chr3:55313580..55313599, -
9.99e-30FFCP PHASE1:Hg19::chr21:17726230..17726234,+#_386dfe4830dbd57faf5e3f149604690ep@chr21:17726230..17726234, +
9.99e-30FFCP PHASE2:Hg19::chr20:26116623..26116634,+#_386dfe4830dbd57faf5e3f149604690ep@chr20:26116623..26116634, +
9.99e-30FFCP PHASE1:Hg19::chr13:87781278..87781282,+#_386dfe4830dbd57faf5e3f149604690ep@chr13:87781278..87781282, +
1.33e-29FFCP PHASE2:Hg19::chr1:4729528..4729537,-#_7efbb6381d4712819c121038a5dff70bp@chr1:4729528..4729537, -
1.33e-29FFCP PHASE1:Hg19::chr6:150217260..150217271,-#_7efbb6381d4712819c121038a5dff70bp6@RAET1E
1.33e-29FFCP PHASE1:Hg19::chr1:4729528..4729537,-#_7efbb6381d4712819c121038a5dff70bp@chr1:4729528..4729537, -
1.33e-29FFCP PHASE2:Hg19::chr6:150217260..150217271,-#_7efbb6381d4712819c121038a5dff70bp6@RAET1E

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