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FFCP PHASE1:Mm9::chr1:154613453..154613482,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19731
|EntrezGene=19731
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q8N0
|UniProt=E9Q8N0
|association_with_transcript=0bp_to_ENSMUST00000111857_5end
|association_with_transcript=0bp_to_ENSMUST00000111857_5end
|cluster_id=chr1:154613453..154613482,-
|description=CAGE_peak_4_at_Rgl1_5end
|description=CAGE_peak_4_at_Rgl1_5end
|id=chr1:154613453..154613482,-
|id=chr1:154613453..154613482,-
|ontology_enrichment_celltype=CL:0000117!5.49e-08!23;CL:0000337!5.49e-08!23;CL:0000540!1.31e-07!33;CL:0000047!1.31e-07!33;CL:0000031!1.31e-07!33;CL:0000404!1.31e-07!33;CL:0000221!4.07e-07!44;CL:0000133!4.07e-07!44;CL:0002319!9.56e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,8.97e-12,23;CL:0000337,8.97e-12,23;CL:0000540,1.53e-08,33;CL:0000047,1.53e-08,33;CL:0000031,1.53e-08,33;CL:0000404,1.53e-08,33;CL:0000393,3.80e-07,39;CL:0000211,3.80e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0000073!6.13e-20!75;UBERON:0001016!6.13e-20!75;UBERON:0001049!8.49e-18!52;UBERON:0005068!8.49e-18!52;UBERON:0006241!8.49e-18!52;UBERON:0007135!8.49e-18!52;UBERON:0000955!3.20e-17!50;UBERON:0006238!3.20e-17!50;UBERON:0002616!1.48e-16!49;UBERON:0000033!3.87e-16!63;UBERON:0004121!5.93e-16!102;UBERON:0000924!5.93e-16!102;UBERON:0006601!5.93e-16!102;UBERON:0002020!2.71e-15!34;UBERON:0002346!1.34e-14!71;UBERON:0003075!1.34e-14!71;UBERON:0007284!1.34e-14!71;UBERON:0003080!3.01e-14!40;UBERON:0002780!1.27e-13!39;UBERON:0001890!1.27e-13!39;UBERON:0006240!1.27e-13!39;UBERON:0002791!5.08e-13!29;UBERON:0003528!5.08e-13!29;UBERON:0001893!5.08e-13!29;UBERON:0003056!6.10e-13!49;UBERON:0000956!8.14e-12!21;UBERON:0001869!8.14e-12!21;UBERON:0000203!8.14e-12!21;UBERON:0000153!3.65e-10!94;UBERON:0002619!6.17e-10!17;UBERON:0007811!4.40e-09!86;UBERON:0002021!5.00e-08!10;UBERON:0000411!5.00e-08!10;UBERON:0001950!5.00e-08!10;UBERON:0004111!6.49e-08!122;UBERON:0000025!1.69e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.13e-28,54;UBERON:0001049,2.30e-26,52;UBERON:0005068,2.30e-26,52;UBERON:0006241,2.30e-26,52;UBERON:0007135,2.30e-26,52;UBERON:0001017,3.95e-25,73;UBERON:0002020,6.26e-25,34;UBERON:0001016,4.65e-24,75;UBERON:0002346,5.23e-24,64;UBERON:0003075,5.23e-24,64;UBERON:0007284,5.23e-24,64;UBERON:0000955,2.97e-22,47;UBERON:0006238,2.97e-22,47;UBERON:0010371,7.50e-22,73;UBERON:0002616,3.95e-21,46;UBERON:0003528,9.51e-21,29;UBERON:0002791,9.51e-21,29;UBERON:0001893,9.51e-21,29;UBERON:0003080,1.67e-20,40;UBERON:0004121,5.85e-20,95;UBERON:0000924,5.85e-20,95;UBERON:0006601,5.85e-20,95;UBERON:0002780,2.06e-19,39;UBERON:0001890,2.06e-19,39;UBERON:0006240,2.06e-19,39;UBERON:0000956,8.76e-19,21;UBERON:0001869,8.76e-19,21;UBERON:0000203,8.76e-19,21;UBERON:0003056,1.14e-18,49;UBERON:0010314,4.25e-16,92;UBERON:0002619,2.62e-15,17;UBERON:0002021,1.52e-13,10;UBERON:0000411,1.52e-13,10;UBERON:0001950,1.52e-13,10;UBERON:0004111,1.99e-09,122;UBERON:0000025,5.41e-09,114
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.811015449756117,0.550640256485045,0,0.436050312760893,0.878744730937887,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0.672187598284928,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0.599200221036809,0.768436610643109,1.34796496001021,1.62007125998029,1.68259969081106,3.71346279724945,1.54607978666129,1.95985278743926,1.72521847832825,2.75765635983006,7.70811166995721,7.53355294702608,6.75868746327471,0.395658863190582,0.731901148819277,0,7.81712397203867,7.31591393041184,6.26472815884921,1.17851434189467,3.13217697758026,2.23679334990361,0.075726193333184,0.529000920747499,0.869593466105033,0,0,0,0,0,1.54488862144927,0.681721290312231,1.03914401841148,0.35333957451034,1.97180787687353,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.68510327831436,0.258937883647172,1.03909497345377,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0.502666365318702,0.741584903203122,1.01219549843938,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.46390398505774,0.83778682725382,0.510914110417183,0.239630249011841,0,0,12.2828324311955,12.8100168789215,3.5183218591602,18.4253779403813,19.1786592997748,6.85700547046548,9.73447578406546,0.407357455401265,0.497627882440372,1.51633655060205,1.26265113531884,0,0,0.360124259610698,0.452114453507145,0.680364991513279,0.384341160854549,1.40552586839593,3.10444044886819,0.431135985865684,0.567318240503458,0.879755620819744,1.31517439456545,1.39023624612799,0.696504333044333,1.23469281844766,1.19420560091096,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0.946978942340841,0.196764231747404,0.925602677324269,1.16266972375204,0.804820204198858,0.700592054203017,0.493679549740441,0.164167464079095,0.648550476366846,0.584799949701329,0.219550115291051,0.536825675041487,15.7717461423095,2.88132914661996,0,0,0.639864751605702,0.232236671860439,0.77320476793256,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.796565093017469,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,0.885311519739602,0.590440591918409,0.784993639206874,0.246794327843601,0,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0.488894929326078,0.848725428875941,0.234690248288502,1.84256883185997,0.952174563544055,0.390267295715598,0.788175720530955,0.8858587585951,0.478364305972461,0.983179888294428,0.518054945597687,0.433947175744535,0,0.54390568381871,0,0.275936746304732,9.31193421929193,8.67366480782304,0.983609672260053,0,0.94652465824877,1.17131623288992,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,0.790575555893047,13.1741739732941,0.567760340833074,0.178065603667255,0.488660878060728,1.97964147567043,0,0.485561272309963,0.604647113929502,0.943025398779491,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,5.44703369206061,0.36012218806262,0.388076051348264,0.643011105094777,1.59606210278046,0.891844088010353,0.822745103010605,0,0,0,1.10264199027481,0.49465875882444,0.484393280087717,0.542816324353403,0.358117032009409,0.492422699235184,0.291480836629851,11.8672193286726,0.341741761595705,0,0,0,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.813277868507395,0.648032044930808,0,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0.259229946583586,0.621339313086926,3.94585057078933,0.299033092087958,0.496375471371293,0.388902376688095,0.904118764344118,0.168956125490778,0.821500670520278,0.651021924219751,0.104859344425711,5.31485065817213,8.64090018773596,0.316011120628178,0.202725215290164,0.821687657318618,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.350630706544707,0,0,0,0,0.19318959403219,0.750729901804728,1.28206136987086,0.428736758158132,0.501572104035363,12.4245405375755,15.651058041244,14.3223878359849,8.76451229952807,15.0718154349541,14.3524840504043,12.1504050041725,12.158672487054,18.1256963593682,12.9440077937955,0.31136204275253,0,1.02440163452481,0,1.04806581313991,0.919217542250071,0.44449345560323,0.824140228955577,0,2.27427490587418,0.760437899670719,0.188626341386076,0.37456602987953,0.704276676453562,0.746661096422973,0,0.811190281613988,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,1.03520318456864,0.423073039458382,1.09756783723664,1.57841826862706,0.5432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|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,4.84746753861098,0.297872853602656,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.811015449756117,0.550640256485045,0,0.436050312760893,0.878744730937887,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0.672187598284928,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0.599200221036809,0.768436610643109,1.34796496001021,1.62007125998029,1.68259969081106,3.71346279724945,1.54607978666129,1.95985278743926,1.72521847832825,2.75765635983006,7.70811166995721,7.53355294702608,6.75868746327471,0.395658863190582,0.731901148819277,0,7.81712397203867,7.31591393041184,6.26472815884921,1.17851434189467,3.13217697758026,2.23679334990361,0.075726193333184,0.529000920747499,0.869593466105033,0,0,0,0,0,1.54488862144927,0.681721290312231,1.03914401841148,0.35333957451034,1.97180787687353,1.28326477414318,5.09610479413291,7.11066703153331,0.216491041011214,0,0.505524445014783,0.68510327831436,0.258937883647172,1.03909497345377,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0.502666365318702,0.741584903203122,1.01219549843938,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.46390398505774,0.83778682725382,0.510914110417183,0.239630249011841,0,0,12.2828324311955,12.8100168789215,3.5183218591602,18.4253779403813,19.1786592997748,6.85700547046548,9.73447578406546,0.407357455401265,0.497627882440372,1.51633655060205,1.26265113531884,0,0,0.360124259610698,0.452114453507145,0.680364991513279,0.384341160854549,1.40552586839593,3.10444044886819,0.431135985865684,0.567318240503458,0.879755620819744,1.31517439456545,1.39023624612799,0.696504333044333,1.23469281844766,1.19420560091096,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0.946978942340841,0.196764231747404,0.925602677324269,1.16266972375204,0.804820204198858,0.700592054203017,0.493679549740441,0.164167464079095,0.648550476366846,0.584799949701329,0.219550115291051,0.536825675041487,15.7717461423095,2.88132914661996,0,0,0.639864751605702,0.232236671860439,0.77320476793256,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.796565093017469,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,0.885311519739602,0.590440591918409,0.784993639206874,0.246794327843601,0,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0.488894929326078,0.848725428875941,0.234690248288502,1.84256883185997,0.952174563544055,0.390267295715598,0.788175720530955,0.8858587585951,0.478364305972461,0.983179888294428,0.518054945597687,0.433947175744535,0,0.54390568381871,0,0.275936746304732,9.31193421929193,8.67366480782304,0.983609672260053,0,0.94652465824877,1.17131623288992,0.430846795465598,0.238968797952552,0.668396022247182,0.566153061577665,0,0.584511715822624,0.790575555893047,13.1741739732941,0.567760340833074,0.178065603667255,0.488660878060728,1.97964147567043,0,0.485561272309963,0.604647113929502,0.943025398779491,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,5.44703369206061,0.36012218806262,0.388076051348264,0.643011105094777,1.59606210278046,0.891844088010353,0.822745103010605,0,0,0,1.10264199027481,0.49465875882444,0.484393280087717,0.542816324353403,0.358117032009409,0.492422699235184,0.291480836629851,11.8672193286726,0.341741761595705,0,0,0,0.27338845544205,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.813277868507395,0.648032044930808,0,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0.259229946583586,0.621339313086926,3.94585057078933,0.299033092087958,0.496375471371293,0.388902376688095,0.904118764344118,0.168956125490778,0.821500670520278,0.651021924219751,0.104859344425711,5.31485065817213,8.64090018773596,0.316011120628178,0.202725215290164,0.821687657318618,0,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.350630706544707,0,0,0,0,0.19318959403219,0.750729901804728,1.28206136987086,0.428736758158132,0.501572104035363,12.4245405375755,15.651058041244,14.3223878359849,8.76451229952807,15.0718154349541,14.3524840504043,12.1504050041725,12.158672487054,18.1256963593682,12.9440077937955,0.31136204275253,0,1.02440163452481,0,1.04806581313991,0.919217542250071,0.44449345560323,0.824140228955577,0,2.27427490587418,0.760437899670719,0.188626341386076,0.37456602987953,0.704276676453562,0.746661096422973,0,0.811190281613988,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,0.581385666529314,1.03520318456864,0.423073039458382,1.09756783723664,1.57841826862706,0.5432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|short_description=p4@Rgl1
|short_description=p4@Rgl1
}}
}}

Latest revision as of 13:39, 26 September 2015

Short description:p4@Rgl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rgl1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000111857_5end
EntrezGene:Rgl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rgl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.28
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D518.43
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C911.87
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.97e-1223
neuroblast (sensu Vertebrata)8.97e-1223
neuron1.53e-0833
neuronal stem cell1.53e-0833
neuroblast1.53e-0833
electrically signaling cell1.53e-0833
electrically responsive cell3.80e-0739
electrically active cell3.80e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.13e-2854
neural tube2.30e-2652
neural rod2.30e-2652
future spinal cord2.30e-2652
neural keel2.30e-2652
central nervous system3.95e-2573
gray matter6.26e-2534
nervous system4.65e-2475
neurectoderm5.23e-2464
neural plate5.23e-2464
presumptive neural plate5.23e-2464
brain2.97e-2247
future brain2.97e-2247
ecto-epithelium7.50e-2273
regional part of brain3.95e-2146
brain grey matter9.51e-2129
regional part of telencephalon9.51e-2129
telencephalon9.51e-2129
anterior neural tube1.67e-2040
ectoderm-derived structure5.85e-2095
ectoderm5.85e-2095
presumptive ectoderm5.85e-2095
regional part of forebrain2.06e-1939
forebrain2.06e-1939
future forebrain2.06e-1939
cerebral cortex8.76e-1921
cerebral hemisphere8.76e-1921
pallium8.76e-1921
pre-chordal neural plate1.14e-1849
structure with developmental contribution from neural crest4.25e-1692
regional part of cerebral cortex2.62e-1517
occipital lobe1.52e-1310
visual cortex1.52e-1310
neocortex1.52e-1310
anatomical conduit1.99e-09122
tube5.41e-09114
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