FFCP PHASE1:Mm9::chr1:135811313..135811319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135811313..135811319,- | |||
|description=CAGE_peak_at_chr1:135811313..135811319,- | |description=CAGE_peak_at_chr1:135811313..135811319,- | ||
|id=chr1:135811313..135811319,- | |id=chr1:135811313..135811319,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.23e-36,2;CL:0002604,4.23e-36,2;CL:0000128,8.26e-13,6;CL:0000126,8.26e-13,6;CL:0000127,8.26e-13,6;CL:0002453,7.26e-10,8;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10;CL:0000192,4.17e-07,3;CL:0000359,4.17e-07,3;CL:0002539,4.17e-07,3;CL:0000514,4.17e-07,3;CL:0002293,4.77e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!1.28e-07!4;UBERON:0001637!1.28e-07!4;UBERON:0003509!1.28e-07!4;UBERON:0004573!1.28e-07!4;UBERON:0004571!1.28e-07!4;UBERON:0010191!1.28e-07!4;UBERON:0004572!1.28e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.95e-11,7;UBERON:0003022,3.95e-11,7;UBERON:0002421,3.95e-11,7;UBERON:0000349,3.95e-11,7;UBERON:0002600,3.95e-11,7;UBERON:0001135,4.17e-07,3;UBERON:0004237,4.17e-07,3;UBERON:0004695,4.17e-07,3;UBERON:0002111,4.17e-07,3;UBERON:0004178,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.367093504323363,0,0,1.5378032791413,4.08302788055995,0.419959264876088,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,1.1930122580464,0.519572009205738,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.367093504323363,0,0,1.5378032791413,4.08302788055995,0.419959264876088,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,1.1930122580464,0.519572009205738,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:135811313..135811319,- | |short_description=p@chr1:135811313..135811319,- | ||
}} | }} |
Latest revision as of 19:45, 4 August 2015
Short description: | p@chr1:135811313..135811319, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811313..135811319, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.23e-36 | 2 |
astrocyte of the hippocampus | 4.23e-36 | 2 |
oligodendrocyte | 8.26e-13 | 6 |
macroglial cell | 8.26e-13 | 6 |
astrocyte | 8.26e-13 | 6 |
oligodendrocyte precursor cell | 7.26e-10 | 8 |
migratory neural crest cell | 4.34e-08 | 10 |
neuron associated cell | 4.34e-08 | 10 |
glial cell (sensu Vertebrata) | 4.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.34e-08 | 10 |
glial cell | 4.34e-08 | 10 |
glioblast | 4.34e-08 | 10 |
glioblast (sensu Vertebrata) | 4.34e-08 | 10 |
smooth muscle cell | 4.17e-07 | 3 |
vascular associated smooth muscle cell | 4.17e-07 | 3 |
aortic smooth muscle cell | 4.17e-07 | 3 |
smooth muscle myoblast | 4.17e-07 | 3 |
epithelial cell of thymus | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.95e-11 | 7 |
lobe parts of cerebral cortex | 3.95e-11 | 7 |
hippocampal formation | 3.95e-11 | 7 |
limbic system | 3.95e-11 | 7 |
limbic lobe | 3.95e-11 | 7 |
smooth muscle tissue | 4.17e-07 | 3 |
blood vessel smooth muscle | 4.17e-07 | 3 |
arterial system smooth muscle | 4.17e-07 | 3 |
artery smooth muscle tissue | 4.17e-07 | 3 |
aorta smooth muscle tissue | 4.17e-07 | 3 |