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FFCP PHASE1:Mm9::chr1:121733665..121733716,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19258
|EntrezGene=19258
|HGNC=
|HGNC=
|MCL_coexpression_id=189
|TSSclassifier=NA
|UniProt=E9Q210,E9PUU9,Q8BQQ4,Q9WU22
|UniProt=E9Q210,E9PUU9,Q8BQQ4,Q9WU22
|association_with_transcript=-17bp_to_ENSMUST00000166422,ENSMUST00000168303,NM_019933,uc007ciz.1_5end
|association_with_transcript=-17bp_to_ENSMUST00000166422,ENSMUST00000168303,NM_019933,uc007ciz.1_5end
|cluster_id=chr1:121733665..121733716,-
|description=CAGE_peak_3_at_Ptpn4_5end
|description=CAGE_peak_3_at_Ptpn4_5end
|id=chr1:121733665..121733716,-
|id=chr1:121733665..121733716,-
|ontology_enrichment_celltype=CL:0000117!2.64e-07!23;CL:0000337!2.64e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.92e-11,23;CL:0000337,5.92e-11,23;CL:0002610,2.15e-08,3;CL:0002614,2.66e-07,3;CL:0000540,7.42e-07,33;CL:0000047,7.42e-07,33;CL:0000031,7.42e-07,33;CL:0000404,7.42e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.96e-16!52;UBERON:0005068!1.96e-16!52;UBERON:0006241!1.96e-16!52;UBERON:0007135!1.96e-16!52;UBERON:0000955!7.36e-16!50;UBERON:0006238!7.36e-16!50;UBERON:0002616!3.44e-15!49;UBERON:0000033!7.35e-15!63;UBERON:0002346!8.47e-15!71;UBERON:0003075!8.47e-15!71;UBERON:0007284!8.47e-15!71;UBERON:0001017!1.85e-14!73;UBERON:0005743!1.85e-14!73;UBERON:0000073!1.27e-13!75;UBERON:0001016!1.27e-13!75;UBERON:0004121!1.35e-13!102;UBERON:0000924!1.35e-13!102;UBERON:0006601!1.35e-13!102;UBERON:0002020!1.81e-12!34;UBERON:0003056!1.59e-11!49;UBERON:0007811!1.86e-10!86;UBERON:0003080!2.36e-10!40;UBERON:0002791!7.58e-10!29;UBERON:0003528!7.58e-10!29;UBERON:0001893!7.58e-10!29;UBERON:0000153!8.37e-10!94;UBERON:0002780!9.13e-10!39;UBERON:0001890!9.13e-10!39;UBERON:0006240!9.13e-10!39;UBERON:0000956!6.89e-08!21;UBERON:0001869!6.89e-08!21;UBERON:0000203!6.89e-08!21;UBERON:0002021!9.98e-08!10;UBERON:0000411!9.98e-08!10;UBERON:0001950!9.98e-08!10;UBERON:0002619!1.34e-07!17;UBERON:0003076!1.88e-07!12;UBERON:0003057!1.88e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-33,54;UBERON:0001017,5.47e-30,73;UBERON:0001049,3.25e-29,52;UBERON:0005068,3.25e-29,52;UBERON:0006241,3.25e-29,52;UBERON:0007135,3.25e-29,52;UBERON:0001016,5.66e-29,75;UBERON:0002346,3.38e-24,64;UBERON:0003075,3.38e-24,64;UBERON:0007284,3.38e-24,64;UBERON:0000955,3.70e-24,47;UBERON:0006238,3.70e-24,47;UBERON:0002020,8.01e-23,34;UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0002616,1.69e-22,46;UBERON:0002021,1.48e-20,10;UBERON:0000411,1.48e-20,10;UBERON:0001950,1.48e-20,10;UBERON:0010371,2.56e-20,73;UBERON:0003528,9.40e-18,29;UBERON:0002791,9.40e-18,29;UBERON:0001893,9.40e-18,29;UBERON:0003080,1.92e-17,40;UBERON:0002780,5.95e-16,39;UBERON:0001890,5.95e-16,39;UBERON:0006240,5.95e-16,39;UBERON:0003056,7.61e-15,49;UBERON:0010314,1.26e-14,92;UBERON:0002619,1.44e-13,17;UBERON:0003076,3.69e-13,12;UBERON:0003057,3.69e-13,12;UBERON:0000956,1.27e-12,21;UBERON:0001869,1.27e-12,21;UBERON:0000203,1.27e-12,21;UBERON:0000025,2.74e-11,114;UBERON:0004111,4.51e-10,122;UBERON:0002950,2.33e-09,4;UBERON:0001891,2.33e-09,4;UBERON:0009616,2.33e-09,4;UBERON:0010286,2.33e-09,4;UBERON:0004684,2.15e-08,3;UBERON:0002275,2.15e-08,3;UBERON:0002240,2.90e-08,6;UBERON:0005174,2.90e-08,6;UBERON:0001137,2.90e-08,6;UBERON:0002038,2.66e-07,3;UBERON:0009663,2.66e-07,3;UBERON:0009661,2.66e-07,3;UBERON:0000125,2.66e-07,3;UBERON:0002308,2.66e-07,3;UBERON:0011216,7.16e-07,194
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0,0,0,0,0,2.8064285749853,0,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0,1.71390590642282,2.20868540951614,0.734944795289724,0.191690942036473,0.919218786610021,12.1127469099328,13.5348578370299,12.9029487935245,0.131886287730194,0.640413505216868,0,5.02529398202486,3.37657566019008,4.43114918552749,3.24091444021034,2.70506193518296,0.931997229126503,0.075726193333184,0,0,0,1.3599426674155,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.34255163915718,0.517875767294343,0.742210695324124,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,1.01219549843938,0.884610551949874,0.323533699894818,0.220841518460394,0,0,7.02673912827713,9.84399522023239,0.255457055208591,0,0,0.127070227073065,5.69204429738326,1.83000241127451,2.1361239859187,3.47648640384553,4.09144731728529,8.72709787150152,8.27430441645564,0.101839363850316,0.248813941220186,0.252722758433675,0.841767423545896,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.384341160854549,0.281105173679186,2.32833033665114,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,3.15434922846191,0.514523061896422,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.670025029767263,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.637819074629948,0.327726629431476,0,0,0,0,0.491764273019036,0,4.17431533968259,4.45404409050372,0.327869890753351,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.395287777946524,6.74774764485795,0,0.178065603667255,0.325773918707152,0,0,0,0,0.565815239267694,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.656563598980245,0,3.52308073819968,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0.165306911450672,0,0.259229946583586,0,2.25477175473676,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0,0.643105137237198,0.501572104035363,2.82375921308533,1.84130094602871,5.72895513439397,4.29632955859219,3.42541259885321,5.2877572817279,5.40018000185445,4.5032120322422,7.25027854374727,3.10656187051092,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0.565879024158229,0,0.256100609619477,0.402048282689293,0,0.115884325944855,0.964546102318525,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0,0,0,0,0,2.8064285749853,0,0.522399578277871,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0,1.71390590642282,2.20868540951614,0.734944795289724,0.191690942036473,0.919218786610021,12.1127469099328,13.5348578370299,12.9029487935245,0.131886287730194,0.640413505216868,0,5.02529398202486,3.37657566019008,4.43114918552749,3.24091444021034,2.70506193518296,0.931997229126503,0.075726193333184,0,0,0,1.3599426674155,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,0.34255163915718,0.517875767294343,0.742210695324124,0,0,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,1.01219549843938,0.884610551949874,0.323533699894818,0.220841518460394,0,0,7.02673912827713,9.84399522023239,0.255457055208591,0,0,0.127070227073065,5.69204429738326,1.83000241127451,2.1361239859187,3.47648640384553,4.09144731728529,8.72709787150152,8.27430441645564,0.101839363850316,0.248813941220186,0.252722758433675,0.841767423545896,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.384341160854549,0.281105173679186,2.32833033665114,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,3.15434922846191,0.514523061896422,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.670025029767263,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.637819074629948,0.327726629431476,0,0,0,0,0.491764273019036,0,4.17431533968259,4.45404409050372,0.327869890753351,1.51482556322624,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.395287777946524,6.74774764485795,0,0.178065603667255,0.325773918707152,0,0,0,0,0.565815239267694,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.428674070063185,0.532020700926821,0.356737635204141,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.484393280087717,0.241251699712623,0.119372344003136,0.656563598980245,0,3.52308073819968,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0.165306911450672,0,0.259229946583586,0,2.25477175473676,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.352071715937262,0,0.104859344425711,0.724752362478018,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0,0.643105137237198,0.501572104035363,2.82375921308533,1.84130094602871,5.72895513439397,4.29632955859219,3.42541259885321,5.2877572817279,5.40018000185445,4.5032120322422,7.25027854374727,3.10656187051092,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0.565879024158229,0,0.256100609619477,0.402048282689293,0,0.115884325944855,0.964546102318525,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.644613162144895,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p3@Ptpn4
|short_description=p3@Ptpn4
}}
}}

Latest revision as of 06:18, 26 September 2015

Short description:p3@Ptpn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ptpn4_5end
Coexpression cluster:MCL_coexpression_mm9:189
Association with transcript: -17bp_to_ENSMUST00000166422, ENSMUST00000168303, NM_019933, uc007ciz.1_5end
EntrezGene:Ptpn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ptpn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.92e-1123
neuroblast (sensu Vertebrata)5.92e-1123
raphe nuclei neuron2.15e-083
neuron of the substantia nigra2.66e-073
neuron7.42e-0733
neuronal stem cell7.42e-0733
neuroblast7.42e-0733
electrically signaling cell7.42e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.13e-3354
central nervous system5.47e-3073
neural tube3.25e-2952
neural rod3.25e-2952
future spinal cord3.25e-2952
neural keel3.25e-2952
nervous system5.66e-2975
neurectoderm3.38e-2464
neural plate3.38e-2464
presumptive neural plate3.38e-2464
brain3.70e-2447
future brain3.70e-2447
gray matter8.01e-2334
ectoderm-derived structure1.13e-2295
ectoderm1.13e-2295
presumptive ectoderm1.13e-2295
regional part of brain1.69e-2246
occipital lobe1.48e-2010
visual cortex1.48e-2010
neocortex1.48e-2010
ecto-epithelium2.56e-2073
brain grey matter9.40e-1829
regional part of telencephalon9.40e-1829
telencephalon9.40e-1829
anterior neural tube1.92e-1740
regional part of forebrain5.95e-1639
forebrain5.95e-1639
future forebrain5.95e-1639
pre-chordal neural plate7.61e-1549
structure with developmental contribution from neural crest1.26e-1492
regional part of cerebral cortex1.44e-1317
posterior neural tube3.69e-1312
chordal neural plate3.69e-1312
cerebral cortex1.27e-1221
cerebral hemisphere1.27e-1221
pallium1.27e-1221
tube2.74e-11114
anatomical conduit4.51e-10122
regional part of midbrain2.33e-094
midbrain2.33e-094
presumptive midbrain2.33e-094
midbrain neural tube2.33e-094
raphe nuclei2.15e-083
reticular formation2.15e-083
spinal cord2.90e-086
dorsal region element2.90e-086
dorsum2.90e-086
substantia nigra2.66e-073
telencephalic nucleus2.66e-073
midbrain nucleus2.66e-073
neural nucleus2.66e-073
nucleus of brain2.66e-073
organ system subdivision7.16e-07194
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