FFCP PHASE1:Hg19::chr11:69002371..69002382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69002371..69002382,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr11:69002371..69002382,- | |description=CAGE_peak_at_chr11:69002371..69002382,- | ||
|id=chr11:69002371..69002382,- | |id=chr11:69002371..69002382,- | ||
|ontology_enrichment_celltype=CL:0000945!1.45e-08!24;CL:0000826!1.45e-08!24;CL:0000946!3.40e-07!1;CL:0000786!3.40e-07!1;CL:0000980!3.40e-07!1;CL:0002127!3.84e-07!1;CL:0000914!3.84e-07!1;CL:0000911!3.84e-07!1;CL:0000814!3.84e-07!1;CL:0002042!3.84e-07!1;CL:0002039!3.84e-07!1;CL:0002040!3.84e-07!1;CL:0002041!3.84e-07!1 | |ontology_enrichment_celltype=CL:0000945!1.45e-08!24;CL:0000826!1.45e-08!24;CL:0000946!3.40e-07!1;CL:0000786!3.40e-07!1;CL:0000980!3.40e-07!1;CL:0002127!3.84e-07!1;CL:0000914!3.84e-07!1;CL:0000911!3.84e-07!1;CL:0000814!3.84e-07!1;CL:0002042!3.84e-07!1;CL:0002039!3.84e-07!1;CL:0002040!3.84e-07!1;CL:0002041!3.84e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.22e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.22e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!6.04e-15!51;DOID:0060083!6.04e-15!51;DOID:1036!1.96e-12!8;DOID:162!4.07e-10!235;DOID:14566!8.32e-10!239;DOID:0050686!2.79e-09!137;DOID:1240!6.74e-09!39;DOID:4960!8.54e-08!1;DOID:0070004!8.54e-08!1;DOID:9119!1.25e-07!1;DOID:2355!4.61e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.30e-40;1!DOID:0070004;3.30e-40;1!DOID:3910;3.11e-21;2!DOID:3908;2.53e-09;5!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.30e-40,1;DOID:0070004,3.30e-40,1;DOID:3910,3.11e-21,2;DOID:3908,2.53e-09,5;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.02e-07!4;UBERON:0004785!3.02e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.11e-21;2!UBERON:0002173;3.11e-21;2!UBERON:0002186;3.11e-21;2!UBERON:0004821;1.22e-14;3!UBERON:0007499;1.22e-14;3!UBERON:0003215;1.22e-14;3!UBERON:0010368;1.22e-14;3!UBERON:0009911;1.22e-14;3!UBERON:0002299;1.22e-14;3!UBERON:0006524;1.22e-14;3!UBERON:0008874;1.22e-14;3!UBERON:0002169;1.22e-14;3!UBERON:0004894;1.22e-14;3!UBERON:0009856;2.53e-11;4!UBERON:0003343;2.80e-11;4!UBERON:0004785;2.80e-11;4!UBERON:0000974;5.92e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.11e-21,2;UBERON:0002173,3.11e-21,2;UBERON:0002186,3.11e-21,2;UBERON:0004821,1.22e-14,3;UBERON:0003215,1.22e-14,3;UBERON:0010368,1.22e-14,3;UBERON:0009911,1.22e-14,3;UBERON:0002299,1.22e-14,3;UBERON:0006524,1.22e-14,3;UBERON:0008874,1.22e-14,3;UBERON:0002169,1.22e-14,3;UBERON:0004894,1.22e-14,3;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4 | |||
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|short_description=p@chr11:69002371..69002382,- | |short_description=p@chr11:69002371..69002382,- | ||
}} | }} |
Latest revision as of 01:56, 24 July 2015
Short description: | p@chr11:69002371..69002382, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:69002371..69002382, - |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
mucosa of oral region | 2.80e-11 | 4 |
respiratory system mucosa | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.30e-40 | 1 |
myeloma | 3.30e-40 | 1 |
lung adenocarcinoma | 3.11e-21 | 2 |
non-small cell lung carcinoma | 2.53e-09 | 5 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |