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FFCP PHASE1:Mm9::chr15:37721774..37721791,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52589
|EntrezGene=52589
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3Z2Z8,Q91X97
|UniProt=D3Z2Z8,Q91X97
|association_with_transcript=-19bp_to_ENSMUST00000148652,ENSMUST00000168992,NM_001170866,uc011zsg.1_5end
|association_with_transcript=-19bp_to_ENSMUST00000148652,ENSMUST00000168992,NM_001170866,uc011zsg.1_5end
|cluster_id=chr15:37721774..37721791,-
|description=CAGE_peak_2_at_Ncald_5end
|description=CAGE_peak_2_at_Ncald_5end
|id=chr15:37721774..37721791,-
|id=chr15:37721774..37721791,-
|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23
|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.83e-11,23;CL:0000337,5.83e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.98e-18!52;UBERON:0005068!3.98e-18!52;UBERON:0006241!3.98e-18!52;UBERON:0007135!3.98e-18!52;UBERON:0000955!4.24e-17!50;UBERON:0006238!4.24e-17!50;UBERON:0002616!1.34e-16!49;UBERON:0001017!1.09e-15!73;UBERON:0005743!1.09e-15!73;UBERON:0002020!1.15e-15!34;UBERON:0002346!4.93e-15!71;UBERON:0003075!4.93e-15!71;UBERON:0007284!4.93e-15!71;UBERON:0000073!1.71e-14!75;UBERON:0001016!1.71e-14!75;UBERON:0000033!2.50e-14!63;UBERON:0003080!1.23e-13!40;UBERON:0002780!4.12e-13!39;UBERON:0001890!4.12e-13!39;UBERON:0006240!4.12e-13!39;UBERON:0003056!5.35e-13!49;UBERON:0000025!5.87e-13!114;UBERON:0002791!9.29e-13!29;UBERON:0003528!9.29e-13!29;UBERON:0001893!9.29e-13!29;UBERON:0004121!8.05e-11!102;UBERON:0000924!8.05e-11!102;UBERON:0006601!8.05e-11!102;UBERON:0004111!1.02e-10!122;UBERON:0000468!1.71e-09!333;UBERON:0000956!1.00e-08!21;UBERON:0001869!1.00e-08!21;UBERON:0000203!1.00e-08!21;UBERON:0002021!2.79e-08!10;UBERON:0000411!2.79e-08!10;UBERON:0001950!2.79e-08!10;UBERON:0002619!3.86e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.85e-22,54;UBERON:0001049,3.79e-20,52;UBERON:0005068,3.79e-20,52;UBERON:0006241,3.79e-20,52;UBERON:0007135,3.79e-20,52;UBERON:0001017,1.42e-17,73;UBERON:0002346,1.94e-17,64;UBERON:0003075,1.94e-17,64;UBERON:0007284,1.94e-17,64;UBERON:0000955,4.67e-17,47;UBERON:0006238,4.67e-17,47;UBERON:0002020,8.66e-17,34;UBERON:0002616,1.63e-16,46;UBERON:0001016,2.25e-16,75;UBERON:0003080,7.33e-15,40;UBERON:0002780,2.80e-14,39;UBERON:0001890,2.80e-14,39;UBERON:0006240,2.80e-14,39;UBERON:0010314,3.44e-14,92;UBERON:0003056,9.24e-14,49;UBERON:0003528,1.44e-13,29;UBERON:0002791,1.44e-13,29;UBERON:0001893,1.44e-13,29;UBERON:0010371,8.13e-13,73;UBERON:0000025,1.31e-11,114;UBERON:0004121,1.57e-11,95;UBERON:0000924,1.57e-11,95;UBERON:0006601,1.57e-11,95;UBERON:0004111,1.72e-09,122;UBERON:0000956,4.19e-09,21;UBERON:0001869,4.19e-09,21;UBERON:0000203,4.19e-09,21;UBERON:0002021,4.65e-09,10;UBERON:0000411,4.65e-09,10;UBERON:0001950,4.65e-09,10;UBERON:0002619,2.01e-08,17
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,4.33720779770456,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,13.0815093828268,0.878744730937887,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,1.02903774414379,2.0057340795713,1.54701627683233,5.26022798234954,6.34789175126439,4.43681982454325,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,2.38486108309499,1.21505344498522,2.3135745748652,19.7099179238624,16.7860091123226,1.95985278743926,1.43768206527355,2.75765635983006,7.70811166995721,16.4716666129892,16.4358990584181,5.93488294785872,12.9912453915422,5.2091337055676,8.93385596804419,18.5711661310454,12.9878510610289,13.5529149317887,14.9490264839058,5.03278503728312,0,0.226714680320357,1.44932244350839,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0.258937883647172,0.148442139064825,1.73485326766136,1.52232739156071,1.61430848079241,2.26083960828934,1.76383060703557,0.753999547978053,0.741584903203122,1.87979163995885,0,3.23533699894818,1.10420759230197,0.484875253135222,0,5.27005434620785,2.51336048176146,0.510914110417183,0,0,0,10.1857634795279,8.23501085073528,4.64921102817598,22.9448102653805,23.7815375317207,13.2984348518118,12.0058534670141,3.1570202793598,0.746441823660558,0.505445516867349,0.210441855886474,1.17108398666433,1.60931473103431,1.44049703844279,2.56198190320716,1.83698547708585,3.20284300712124,2.24884138943349,0.776110112217047,0.646703978798527,1.32374256117473,0.879755620819744,1.53437012699302,2.50242524303038,4.87553033131033,0.823128545631774,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,2.16074473753218,0.473489471170421,1.96764231747404,1.07986979021165,0.697601834251224,1.3413670069981,1.40118410840603,1.6455984991348,1.64167464079095,2.59420190546738,2.77779976108131,1.97595103761946,1.74468344388483,7.78072809687271,5.76265829323993,0,0.264450566663544,0.853153002140936,0.232236671860439,1.28867461322093,2.62188582010345,1.11189021922435,2.09248188723815,0.949058123089023,0.988193728344065,0.502670417600539,2.38747766449381,2.14460495831032,2.69645822596266,1.08069024937347,0.995706366271836,1.70701110857774,1.5994791765362,1.1270773567308,2.03651327845314,0.387904974335251,1.96380295692892,2.27651533647326,0.590440591918409,0.941992367048249,0.370191491765402,0.296452627087149,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,1.15078454980324,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,12.1937105509959,0.947457058852424,1.14075483509418,1.01847051465113,1.64283173801951,4.18765643604539,3.80869825417622,8.39074685788535,11.6650006638581,11.5161638617363,14.9887482538038,16.5501947862895,14.5055384767352,16.4899926782923,0,0,0,0,7.06422595946285,5.97779601620236,0,1.76729649043061,0,1.17131623288992,0,0,0.222798674082394,0,0.404810701674894,1.16902343164525,0.395287777946524,5.78378369559253,1.41940085208269,1.06839362200353,0.977321756121456,1.81467135269789,0,0.728341908464944,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0.775284879504663,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,0,0,1.98067203434441,2.19909762430683,1.07168517515796,2.6601035046341,2.14042581122485,3.1264313914403,1.8267896946876,0.23467170806371,1.0591603543191,0.220528398054962,0.8244312647074,0.645857706783622,1.62844897306021,0.954978752025092,0,2.04036585640896,3.33765543618917,0,3.50857675537478,2.22233432843654,0,0.136694227721025,0,0,0.279902904647316,0,0,0.632671987162271,3.04979200690273,1.62008011232702,1.88179466413022,2.18362563746178,2.29269388854195,2.23164330458407,2.09404753587224,0.90730481304255,0,0,2.54178128274764,2.64733584731356,3.88902376688095,2.19571699912143,2.70329800785245,2.46450201156083,2.0832701575032,1.36317147753424,0,0,0.948033361884535,0.202725215290164,0.616265742988964,0.389762468933385,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0.403865799792591,0.533447646584999,0.403304740547362,0.487289403698762,0.769694733122636,0.584384510907845,0.453460767230423,0,0,0,2.31827512838629,0.563047426353546,2.01466786693992,0,0,32.1908550291728,45.5721984142105,41.2484769676366,24.9187114398347,43.1601987455505,50.6113911251099,49.2766425169218,37.8269810708345,38.5171047636574,51.776031175182,0.726511433089237,1.59609949360412,1.02440163452481,3.16038732188782,2.09613162627982,1.83843508450014,3.55594764482584,2.06035057238894,2.88827288632634,3.28506375292937,5.57654459758527,3.39527414494937,3.83930180626518,3.52138338226781,3.27382173046996,2.38146845641537,3.70829843023538,3.27945674788299,3.29668720642645,5.00476328456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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,4.33720779770456,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,13.0815093828268,0.878744730937887,1.74986909166855,1.25987779462826,1.43752564364972,0,0,0,1.02903774414379,2.0057340795713,1.54701627683233,5.26022798234954,6.34789175126439,4.43681982454325,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,2.38486108309499,1.21505344498522,2.3135745748652,19.7099179238624,16.7860091123226,1.95985278743926,1.43768206527355,2.75765635983006,7.70811166995721,16.4716666129892,16.4358990584181,5.93488294785872,12.9912453915422,5.2091337055676,8.93385596804419,18.5711661310454,12.9878510610289,13.5529149317887,14.9490264839058,5.03278503728312,0,0.226714680320357,1.44932244350839,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0.842666520790511,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0.258937883647172,0.148442139064825,1.73485326766136,1.52232739156071,1.61430848079241,2.26083960828934,1.76383060703557,0.753999547978053,0.741584903203122,1.87979163995885,0,3.23533699894818,1.10420759230197,0.484875253135222,0,5.27005434620785,2.51336048176146,0.510914110417183,0,0,0,10.1857634795279,8.23501085073528,4.64921102817598,22.9448102653805,23.7815375317207,13.2984348518118,12.0058534670141,3.1570202793598,0.746441823660558,0.505445516867349,0.210441855886474,1.17108398666433,1.60931473103431,1.44049703844279,2.56198190320716,1.83698547708585,3.20284300712124,2.24884138943349,0.776110112217047,0.646703978798527,1.32374256117473,0.879755620819744,1.53437012699302,2.50242524303038,4.87553033131033,0.823128545631774,1.19420560091096,0,0,0,1.24275463521301,0.469052119962192,2.16074473753218,0.473489471170421,1.96764231747404,1.07986979021165,0.697601834251224,1.3413670069981,1.40118410840603,1.6455984991348,1.64167464079095,2.59420190546738,2.77779976108131,1.97595103761946,1.74468344388483,7.78072809687271,5.76265829323993,0,0.264450566663544,0.853153002140936,0.232236671860439,1.28867461322093,2.62188582010345,1.11189021922435,2.09248188723815,0.949058123089023,0.988193728344065,0.502670417600539,2.38747766449381,2.14460495831032,2.69645822596266,1.08069024937347,0.995706366271836,1.70701110857774,1.5994791765362,1.1270773567308,2.03651327845314,0.387904974335251,1.96380295692892,2.27651533647326,0.590440591918409,0.941992367048249,0.370191491765402,0.296452627087149,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,1.15078454980324,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0.358794827043824,0.482443521363367,12.1937105509959,0.947457058852424,1.14075483509418,1.01847051465113,1.64283173801951,4.18765643604539,3.80869825417622,8.39074685788535,11.6650006638581,11.5161638617363,14.9887482538038,16.5501947862895,14.5055384767352,16.4899926782923,0,0,0,0,7.06422595946285,5.97779601620236,0,1.76729649043061,0,1.17131623288992,0,0,0.222798674082394,0,0.404810701674894,1.16902343164525,0.395287777946524,5.78378369559253,1.41940085208269,1.06839362200353,0.977321756121456,1.81467135269789,0,0.728341908464944,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0.775284879504663,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,0,0,1.98067203434441,2.19909762430683,1.07168517515796,2.6601035046341,2.14042581122485,3.1264313914403,1.8267896946876,0.23467170806371,1.0591603543191,0.220528398054962,0.8244312647074,0.645857706783622,1.62844897306021,0.954978752025092,0,2.04036585640896,3.33765543618917,0,3.50857675537478,2.22233432843654,0,0.136694227721025,0,0,0.279902904647316,0,0,0.632671987162271,3.04979200690273,1.62008011232702,1.88179466413022,2.18362563746178,2.29269388854195,2.23164330458407,2.09404753587224,0.90730481304255,0,0,2.54178128274764,2.64733584731356,3.88902376688095,2.19571699912143,2.70329800785245,2.46450201156083,2.0832701575032,1.36317147753424,0,0,0.948033361884535,0.202725215290164,0.616265742988964,0.389762468933385,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0.403865799792591,0.533447646584999,0.403304740547362,0.487289403698762,0.769694733122636,0.584384510907845,0.453460767230423,0,0,0,2.31827512838629,0.563047426353546,2.01466786693992,0,0,32.1908550291728,45.5721984142105,41.2484769676366,24.9187114398347,43.1601987455505,50.6113911251099,49.2766425169218,37.8269810708345,38.5171047636574,51.776031175182,0.726511433089237,1.59609949360412,1.02440163452481,3.16038732188782,2.09613162627982,1.83843508450014,3.55594764482584,2.06035057238894,2.88827288632634,3.28506375292937,5.57654459758527,3.39527414494937,3.83930180626518,3.52138338226781,3.27382173046996,2.38146845641537,3.70829843023538,3.27945674788299,3.29668720642645,5.00476328456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|short_description=p2@Ncald
|short_description=p2@Ncald
}}
}}

Latest revision as of 18:29, 26 September 2015

Short description:p2@Ncald
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ncald_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -19bp_to_ENSMUST00000148652, ENSMUST00000168992, NM_001170866, uc011zsg.1_5end
EntrezGene:Ncald
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ncald

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D522.94
cortex, neonate N30.CNhs11107.1392-42F223.78
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B212.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E614.99
lung, neonate N20.CNhs11109.822-18A416.55
lung, neonate N25.CNhs11119.1359-25C714.51
lung, neonate N30.CNhs11133.1394-42H216.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A550.61
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A951.78
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.83e-1123
neuroblast (sensu Vertebrata)5.83e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.85e-2254
neural tube3.79e-2052
neural rod3.79e-2052
future spinal cord3.79e-2052
neural keel3.79e-2052
central nervous system1.42e-1773
neurectoderm1.94e-1764
neural plate1.94e-1764
presumptive neural plate1.94e-1764
brain4.67e-1747
future brain4.67e-1747
gray matter8.66e-1734
regional part of brain1.63e-1646
nervous system2.25e-1675
anterior neural tube7.33e-1540
regional part of forebrain2.80e-1439
forebrain2.80e-1439
future forebrain2.80e-1439
structure with developmental contribution from neural crest3.44e-1492
pre-chordal neural plate9.24e-1449
brain grey matter1.44e-1329
regional part of telencephalon1.44e-1329
telencephalon1.44e-1329
ecto-epithelium8.13e-1373
tube1.31e-11114
ectoderm-derived structure1.57e-1195
ectoderm1.57e-1195
presumptive ectoderm1.57e-1195
anatomical conduit1.72e-09122
cerebral cortex4.19e-0921
cerebral hemisphere4.19e-0921
pallium4.19e-0921
occipital lobe4.65e-0910
visual cortex4.65e-0910
neocortex4.65e-0910
regional part of cerebral cortex2.01e-0817
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