FFCP PHASE1:Mm9::chr19:32839592..32839597,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:32839592..32839597,+ | |||
|description=CAGE_peak_at_chr19:32839592..32839597,+ | |description=CAGE_peak_at_chr19:32839592..32839597,+ | ||
|id=chr19:32839592..32839597,+ | |id=chr19:32839592..32839597,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.63e-20,3;CL:0000359,9.63e-20,3;CL:0002539,9.63e-20,3;CL:0000514,9.63e-20,3;CL:0002476,1.46e-13,2;CL:0000680,3.57e-10,6;CL:0000187,3.57e-10,6;CL:0000056,3.57e-10,6;CL:0002293,6.72e-10,3;CL:0000738,4.23e-09,17;CL:0002087,4.23e-09,17;CL:0000222,8.52e-09,7;CL:0000624,1.74e-07,8;CL:0000815,2.37e-07,1;CL:0000792,2.37e-07,1;CL:0002194,3.18e-07,4;CL:0000766,3.18e-07,4;CL:0000234,3.18e-07,4;CL:0000576,3.18e-07,4;CL:0000235,3.18e-07,4;CL:0000864,3.18e-07,4;CL:0002009,3.18e-07,4;CL:0000040,3.18e-07,4;CL:0000559,3.18e-07,4;CL:0000355,5.97e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.00e-08!29;UBERON:0002193!1.07e-07!48;UBERON:0002390!6.10e-07!45;UBERON:0003061!6.10e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,9.63e-20,3;UBERON:0004237,9.63e-20,3;UBERON:0004695,9.63e-20,3;UBERON:0002111,9.63e-20,3;UBERON:0004178,9.63e-20,3;UBERON:0000947,5.71e-15,4;UBERON:0001637,5.71e-15,4;UBERON:0004573,5.71e-15,4;UBERON:0003509,5.71e-15,4;UBERON:0004571,5.71e-15,4;UBERON:0010191,5.71e-15,4;UBERON:0004572,5.71e-15,4;UBERON:0000055,4.27e-12,5;UBERON:0007500,4.27e-12,5;UBERON:0001981,4.27e-12,5;UBERON:0002049,4.27e-12,5;UBERON:0007798,4.27e-12,5;UBERON:0004537,4.27e-12,5;UBERON:0006965,4.27e-12,5;UBERON:0003199,2.74e-07,1;UBERON:0001134,5.97e-07,9;UBERON:0002036,5.97e-07,9;UBERON:0002385,5.97e-07,9;UBERON:0000486,5.97e-07,9;UBERON:0007503,5.97e-07,9;UBERON:0001015,5.97e-07,9;UBERON:0002329,5.97e-07,9;UBERON:0003082,5.97e-07,9;UBERON:0003059,5.97e-07,9;UBERON:0007282,5.97e-07,9;UBERON:0004290,5.97e-07,9;UBERON:0009618,5.97e-07,9 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.467225281191051,1.16210991097419,0,0.936258105287974,0,1.03703806693937,0,1.66098764596095,0,0.404950534779652,0,0.157731082679119,0.411343300817216,0.84877930359606,2.46625541438102,0.198581902401771,0.261199789138935,0.639969691173627,1.14704640533585,0,0.430761996159075,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.76255545165808,1.31790010585369,2.0190142737785,0,0.218025156380447,0,0,0,0,0.503347818173209,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0,0,0,0.489963196859816,0.0958454710182364,0.919218786610021,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0.852151612890289,0.779358013808606,0.35333957451034,0.14084341977668,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,1.59857431606684,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0.292399974850665,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.486405680325106,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.44292937929755,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.201932899896295,0.457240839929999,0,0.38983152295901,0.288635524920988,0.116876902181569,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.467225281191051,1.16210991097419,0,0.936258105287974,0,1.03703806693937,0,1.66098764596095,0,0.404950534779652,0,0.157731082679119,0.411343300817216,0.84877930359606,2.46625541438102,0.198581902401771,0.261199789138935,0.639969691173627,1.14704640533585,0,0.430761996159075,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.76255545165808,1.31790010585369,2.0190142737785,0,0.218025156380447,0,0,0,0,0.503347818173209,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0,0,0,0.489963196859816,0.0958454710182364,0.919218786610021,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0.852151612890289,0.779358013808606,0.35333957451034,0.14084341977668,3.84979432242953,5.09610479413291,0,0,0.253359865475099,0,1.59857431606684,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.452114453507145,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0.292399974850665,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.486405680325106,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.44292937929755,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.404593039154462,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.201932899896295,0.457240839929999,0,0.38983152295901,0.288635524920988,0.116876902181569,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:32839592..32839597,+ | |short_description=p@chr19:32839592..32839597,+ | ||
}} | }} |
Latest revision as of 22:17, 3 August 2015
Short description: | p@chr19:32839592..32839597, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:32839592..32839597, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.63e-20 | 3 |
vascular associated smooth muscle cell | 9.63e-20 | 3 |
aortic smooth muscle cell | 9.63e-20 | 3 |
smooth muscle myoblast | 9.63e-20 | 3 |
bone marrow macrophage | 1.46e-13 | 2 |
muscle precursor cell | 3.57e-10 | 6 |
muscle cell | 3.57e-10 | 6 |
myoblast | 3.57e-10 | 6 |
epithelial cell of thymus | 6.72e-10 | 3 |
leukocyte | 4.23e-09 | 17 |
nongranular leukocyte | 4.23e-09 | 17 |
mesodermal cell | 8.52e-09 | 7 |
CD4-positive, alpha-beta T cell | 1.74e-07 | 8 |
regulatory T cell | 2.37e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.37e-07 | 1 |
monopoietic cell | 3.18e-07 | 4 |
myeloid leukocyte | 3.18e-07 | 4 |
phagocyte | 3.18e-07 | 4 |
monocyte | 3.18e-07 | 4 |
macrophage | 3.18e-07 | 4 |
tissue-resident macrophage | 3.18e-07 | 4 |
macrophage dendritic cell progenitor | 3.18e-07 | 4 |
monoblast | 3.18e-07 | 4 |
promonocyte | 3.18e-07 | 4 |
multi-potent skeletal muscle stem cell | 5.97e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 9.63e-20 | 3 |
blood vessel smooth muscle | 9.63e-20 | 3 |
arterial system smooth muscle | 9.63e-20 | 3 |
artery smooth muscle tissue | 9.63e-20 | 3 |
aorta smooth muscle tissue | 9.63e-20 | 3 |
aorta | 5.71e-15 | 4 |
artery | 5.71e-15 | 4 |
systemic artery | 5.71e-15 | 4 |
arterial blood vessel | 5.71e-15 | 4 |
systemic arterial system | 5.71e-15 | 4 |
aortic system | 5.71e-15 | 4 |
arterial system | 5.71e-15 | 4 |
vessel | 4.27e-12 | 5 |
epithelial tube open at both ends | 4.27e-12 | 5 |
blood vessel | 4.27e-12 | 5 |
vasculature | 4.27e-12 | 5 |
vascular system | 4.27e-12 | 5 |
blood vasculature | 4.27e-12 | 5 |
vascular cord | 4.27e-12 | 5 |
egg chamber | 2.74e-07 | 1 |
skeletal muscle tissue | 5.97e-07 | 9 |
striated muscle tissue | 5.97e-07 | 9 |
muscle tissue | 5.97e-07 | 9 |
multilaminar epithelium | 5.97e-07 | 9 |
epithelial vesicle | 5.97e-07 | 9 |
musculature | 5.97e-07 | 9 |
somite | 5.97e-07 | 9 |
myotome | 5.97e-07 | 9 |
presomitic mesoderm | 5.97e-07 | 9 |
presumptive segmental plate | 5.97e-07 | 9 |
dermomyotome | 5.97e-07 | 9 |
trunk paraxial mesoderm | 5.97e-07 | 9 |