FFCP PHASE1:Hg19::chr11:60615014..60615025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79080 | |EntrezGene=79080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28359 | |HGNC=28359 | ||
|TSSclassifier=strong | |||
|UniProt=B4DY99 | |UniProt=B4DY99 | ||
|association_with_transcript=68bp_to_ENST00000545580_5end | |association_with_transcript=68bp_to_ENST00000545580_5end | ||
|cluster_id=chr11:60615014..60615025,+ | |||
|description=CAGE_peak_8_at_CCDC86_5end | |description=CAGE_peak_8_at_CCDC86_5end | ||
|id=chr11:60615014..60615025,+ | |id=chr11:60615014..60615025,+ | ||
|ontology_enrichment_celltype=CL:0002603!6.71e-14!3;CL:0000594!1.28e-12!3;CL:0000128!4.47e-10!7;CL:0000126!4.47e-10!7;CL:0000127!4.47e-10!7;CL:0002453!4.47e-10!7;CL:0002602!6.96e-09!2;CL:0000708!9.35e-07!3 | |ontology_enrichment_celltype=CL:0002603!6.71e-14!3;CL:0000594!1.28e-12!3;CL:0000128!4.47e-10!7;CL:0000126!4.47e-10!7;CL:0000127!4.47e-10!7;CL:0002453!4.47e-10!7;CL:0002602!6.96e-09!2;CL:0000708!9.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.55e-98;3!CL:0000128;6.96e-43;7!CL:0000126;6.96e-43;7!CL:0000127;6.96e-43;7!CL:0000243;3.21e-18;15!CL:0000125;3.21e-18;15!CL:0000095;2.16e-16;17!CL:0000708;2.07e-12;3!CL:0002590;2.74e-12;3!CL:0002319;8.94e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.55e-98,3;CL:0000128,6.96e-43,7;CL:0000126,6.96e-43,7;CL:0000127,6.96e-43,7;CL:0002453,6.96e-43,7;CL:0000243,3.21e-18,15;CL:0000125,3.21e-18,15;CL:0000030,3.21e-18,15;CL:0000339,3.21e-18,15;CL:0000095,2.16e-16,17;CL:0000123,2.16e-16,17;CL:0000708,2.07e-12,3;CL:0002590,2.31e-12,3;CL:0002319,8.94e-12,25;CL:0000333,1.16e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.21e-18;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!8.40e-22!59;UBERON:0001049!3.50e-20!57;UBERON:0005068!3.50e-20!57;UBERON:0006241!3.50e-20!57;UBERON:0007135!3.50e-20!57;UBERON:0007023!7.22e-20!115;UBERON:0000955!1.02e-19!69;UBERON:0006238!1.02e-19!69;UBERON:0002680!3.30e-16!9;UBERON:0001895!3.30e-16!9;UBERON:0010092!3.30e-16!9;UBERON:0004733!5.11e-16!12;UBERON:0002028!5.11e-16!12;UBERON:0007277!5.11e-16!12;UBERON:0001017!7.07e-16!82;UBERON:0003075!4.82e-15!86;UBERON:0007284!4.82e-15!86;UBERON:0005743!6.32e-15!86;UBERON:0004732!1.05e-14!13;UBERON:0002346!3.67e-14!90;UBERON:0000073!4.46e-13!94;UBERON:0001016!4.46e-13!94;UBERON:0003076!1.31e-12!15;UBERON:0003057!1.31e-12!15;UBERON:0002037!6.95e-12!6;UBERON:0006215!6.95e-12!6;UBERON:0000033!2.55e-11!123;UBERON:0001893!3.43e-11!34;UBERON:0003080!1.44e-10!42;UBERON:0000153!1.48e-10!129;UBERON:0007811!1.48e-10!129;UBERON:0001869!6.12e-10!32;UBERON:0002791!1.93e-09!33;UBERON:0003056!2.95e-09!61;UBERON:0002020!3.26e-09!34;UBERON:0003528!3.26e-09!34;UBERON:0002780!5.75e-09!41;UBERON:0001890!5.75e-09!41;UBERON:0006240!5.75e-09!41;UBERON:0009568!6.96e-09!2;UBERON:0002216!6.96e-09!2;UBERON:0002209!6.96e-09!2;UBERON:0002213!6.96e-09!2;UBERON:0004267!6.96e-09!2;UBERON:0006444!6.96e-09!2;UBERON:0001995!6.96e-09!2;UBERON:0004715!6.96e-09!2;UBERON:0001468!6.96e-09!2;UBERON:0001130!6.96e-09!2;UBERON:0001066!6.96e-09!2;UBERON:0000956!2.68e-08!25;UBERON:0000203!2.68e-08!25;UBERON:0002298!4.18e-08!8;UBERON:0001950!4.42e-08!20;UBERON:0002619!2.68e-07!22;UBERON:0004121!8.08e-07!169;UBERON:0003210!9.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.51e-50;6!UBERON:0002680;1.39e-33;9!UBERON:0001895;1.39e-33;9!UBERON:0004733;1.96e-25;12!UBERON:0002028;1.96e-25;12!UBERON:0004732;1.50e-23;13!UBERON:0003210;2.07e-12;3!UBERON:0005284;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.51e-50,6;UBERON:0006215,7.51e-50,6;UBERON:0002680,1.39e-33,9;UBERON:0001895,1.39e-33,9;UBERON:0010092,1.39e-33,9;UBERON:0004733,1.96e-25,12;UBERON:0002028,1.96e-25,12;UBERON:0007277,1.96e-25,12;UBERON:0004732,1.50e-23,13;UBERON:0003076,1.57e-20,15;UBERON:0003057,1.57e-20,15;UBERON:0003210,2.07e-12,3;UBERON:0000955,4.07e-08,68;UBERON:0006238,4.07e-08,68;UBERON:0005284,6.13e-08,5;UBERON:0001017,6.43e-07,81 | |||
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| ||
|short_description=p8@CCDC86 | |short_description=p8@CCDC86 | ||
}} | }} |
Latest revision as of 14:09, 18 September 2015
Short description: | p8@CCDC86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCDC86_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_ENST00000545580_5end |
EntrezGene: | CCDC86 |
HGNC: | 28359 |
UniProt: | B4DY99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.55e-98 | 3 |
oligodendrocyte | 6.96e-43 | 7 |
macroglial cell | 6.96e-43 | 7 |
astrocyte | 6.96e-43 | 7 |
oligodendrocyte precursor cell | 6.96e-43 | 7 |
glial cell (sensu Vertebrata) | 3.21e-18 | 15 |
glial cell | 3.21e-18 | 15 |
glioblast | 3.21e-18 | 15 |
glioblast (sensu Vertebrata) | 3.21e-18 | 15 |
neuron associated cell | 2.16e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 2.16e-16 | 17 |
leptomeningeal cell | 2.07e-12 | 3 |
smooth muscle cell of the brain vasculature | 2.31e-12 | 3 |
neural cell | 8.94e-12 | 25 |
migratory neural crest cell | 1.16e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.51e-50 | 6 |
rhombic lip | 7.51e-50 | 6 |
regional part of metencephalon | 1.39e-33 | 9 |
metencephalon | 1.39e-33 | 9 |
future metencephalon | 1.39e-33 | 9 |
segmental subdivision of hindbrain | 1.96e-25 | 12 |
hindbrain | 1.96e-25 | 12 |
presumptive hindbrain | 1.96e-25 | 12 |
segmental subdivision of nervous system | 1.50e-23 | 13 |
posterior neural tube | 1.57e-20 | 15 |
chordal neural plate | 1.57e-20 | 15 |
blood-cerebrospinal fluid barrier | 2.07e-12 | 3 |
brain | 4.07e-08 | 68 |
future brain | 4.07e-08 | 68 |
brain vasculature | 6.13e-08 | 5 |
central nervous system | 6.43e-07 | 81 |