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FFCP PHASE1:Mm9::chr14:55735477..55735486,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319984
|EntrezGene=319984
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-60bp_to_ENSMUST00000133954_5end
|association_with_transcript=-60bp_to_ENSMUST00000133954_5end
|cluster_id=chr14:55735477..55735486,-
|description=CAGE_peak_4_at_Jph4_5end
|description=CAGE_peak_4_at_Jph4_5end
|id=chr14:55735477..55735486,-
|id=chr14:55735477..55735486,-
|ontology_enrichment_celltype=CL:0000117!2.12e-13!23;CL:0000337!2.12e-13!23;CL:0000540!2.27e-09!33;CL:0000047!2.27e-09!33;CL:0000031!2.27e-09!33;CL:0000404!2.27e-09!33
|ontology_enrichment_celltype=CL:0000117!2.12e-13!23;CL:0000337!2.12e-13!23;CL:0000540!2.27e-09!33;CL:0000047!2.27e-09!33;CL:0000031!2.27e-09!33;CL:0000404!2.27e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-19,23;CL:0000337,1.19e-19,23;CL:0000540,2.81e-11,33;CL:0000047,2.81e-11,33;CL:0000031,2.81e-11,33;CL:0000404,2.81e-11,33;CL:0000393,2.01e-08,39;CL:0000211,2.01e-08,39;CL:0002319,5.27e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.14e-21!71;UBERON:0003075!1.14e-21!71;UBERON:0007284!1.14e-21!71;UBERON:0001049!2.20e-20!52;UBERON:0005068!2.20e-20!52;UBERON:0006241!2.20e-20!52;UBERON:0007135!2.20e-20!52;UBERON:0004121!1.17e-19!102;UBERON:0000924!1.17e-19!102;UBERON:0006601!1.17e-19!102;UBERON:0000033!1.19e-19!63;UBERON:0000955!1.50e-19!50;UBERON:0006238!1.50e-19!50;UBERON:0001017!4.36e-19!73;UBERON:0005743!4.36e-19!73;UBERON:0002616!7.35e-19!49;UBERON:0002020!1.54e-18!34;UBERON:0000073!1.55e-18!75;UBERON:0001016!1.55e-18!75;UBERON:0003056!4.18e-16!49;UBERON:0002791!7.87e-16!29;UBERON:0003528!7.87e-16!29;UBERON:0001893!7.87e-16!29;UBERON:0003080!4.77e-15!40;UBERON:0002780!2.45e-14!39;UBERON:0001890!2.45e-14!39;UBERON:0006240!2.45e-14!39;UBERON:0000956!4.78e-11!21;UBERON:0001869!4.78e-11!21;UBERON:0000203!4.78e-11!21;UBERON:0002619!5.33e-09!17;UBERON:0007811!2.57e-08!86;UBERON:0000153!3.77e-08!94;UBERON:0002021!5.68e-08!10;UBERON:0000411!5.68e-08!10;UBERON:0001950!5.68e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-28,54;UBERON:0002020,1.63e-27,34;UBERON:0001049,9.20e-27,52;UBERON:0005068,9.20e-27,52;UBERON:0006241,9.20e-27,52;UBERON:0007135,9.20e-27,52;UBERON:0002346,1.26e-25,64;UBERON:0003075,1.26e-25,64;UBERON:0007284,1.26e-25,64;UBERON:0001017,1.27e-23,73;UBERON:0003528,2.31e-23,29;UBERON:0002791,2.31e-23,29;UBERON:0001893,2.31e-23,29;UBERON:0000955,1.13e-22,47;UBERON:0006238,1.13e-22,47;UBERON:0001016,1.55e-22,75;UBERON:0002616,1.09e-21,46;UBERON:0010371,1.90e-20,73;UBERON:0003056,5.91e-20,49;UBERON:0004121,2.89e-19,95;UBERON:0000924,2.89e-19,95;UBERON:0006601,2.89e-19,95;UBERON:0003080,4.34e-19,40;UBERON:0002780,4.71e-18,39;UBERON:0001890,4.71e-18,39;UBERON:0006240,4.71e-18,39;UBERON:0000956,4.83e-16,21;UBERON:0001869,4.83e-16,21;UBERON:0000203,4.83e-16,21;UBERON:0010314,3.60e-15,92;UBERON:0002619,6.46e-13,17;UBERON:0002021,2.33e-11,10;UBERON:0000411,2.33e-11,10;UBERON:0001950,2.33e-11,10;UBERON:0002420,1.76e-08,8;UBERON:0007245,1.76e-08,8;UBERON:0010009,1.76e-08,8;UBERON:0010011,1.76e-08,8;UBERON:0000454,1.76e-08,8;UBERON:0003076,3.31e-08,12;UBERON:0003057,3.31e-08,12
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0.190023419456374,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0.384218305321555,2.28117147078651,3.24014251996058,2.52389953621658,3.99911378165325,2.87129103237098,3.1847607795888,2.20444583341944,8.27296907949019,8.8092704799511,15.0671058940522,13.3637683932932,7.78129097608144,8.87430142943374,6.77187381723788,13.4007839520663,7.87867654044352,10.2374826010463,5.89257170947335,5.55249555116501,5.96478226640962,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.173485326766136,1.52232739156071,0.922461989024234,0.904335843315735,1.41106448562846,0.251333182659351,0,0.289198713839823,0,0.485300549842228,0,0,3.72783522436244,33.9625724533395,28.6941988334433,0.510914110417183,0,0,0,27.4116870110826,27.9075367719362,3.8952849154988,28.6810128317256,19.4343747571051,20.5710164113964,15.8996437806402,0.81471491080253,0.124406970610093,0.252722758433675,1.68353484709179,0.260240885925407,0,1.0803727788321,1.50704817835715,1.08858398642125,1.40925092313335,0.655912071918102,4.9153640440413,0,0,0.175951124163949,0.876782929710299,1.94633074457919,1.0447564995665,1.23469281844766,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,23.131894342054,6.89460902941206,0,0.264450566663544,0.639864751605702,1.39342003116263,0.38660238396628,1.00841762311671,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.38992817423824,1.79763881730844,0,0.597423819763102,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,18.6238684385839,14.8858841972098,0,0.757412781613119,0.631016438832513,0,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0,15.1021018718249,2.41298144854057,0.890328018336276,0.651547837414304,3.13443233647817,0,0,0,1.13163047853539,0.885905678642318,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0.177340233642274,0,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,0.161464426695906,0.361877549568935,0.477489376012546,0.164140899745061,0.291480836629851,14.8340241608408,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0.158167996790568,0,0.86404272657441,0.836353184057875,0.218362563746178,0.269728692769641,0.743881101528023,0.785267825952089,0.777689839750757,0.621339313086926,0.56369293868419,0,0,0.388902376688095,0,0.844780627453891,0.117357238645754,0.13020438484395,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,1.68914227906064,2.19781949120718,1.71494703263253,2.00628841614145,12.9892923801925,14.7304075682297,15.4681788628637,16.6697586873377,15.0718154349541,12.0863023582352,14.1754725048679,20.2644541450899,19.0319811773366,16.5683299760582,0.726511433089237,1.99512436700516,1.19513524027894,1.21553358534147,1.67690530102386,2.94149613520023,1.77797382241292,2.26638562962784,0.962757628775446,2.02157769411038,2.78827229879264,0.943131706930381,1.31098110457835,1.6646539625266,1.83793500657962,1.90517476513229,0.927074607558844,1.35036454324594,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,1.1921809497366,1.45346416632329,1.31753132581463,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,1.68342681497322,0.355905054372522,0.985044823755635,0.818462086339379,1.23949472948773,0.385813221962283,2.24829520144151,2.57324769289949,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0.190023419456374,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,3.80298842103708,0,0,0,0,0,0,0.384218305321555,2.28117147078651,3.24014251996058,2.52389953621658,3.99911378165325,2.87129103237098,3.1847607795888,2.20444583341944,8.27296907949019,8.8092704799511,15.0671058940522,13.3637683932932,7.78129097608144,8.87430142943374,6.77187381723788,13.4007839520663,7.87867654044352,10.2374826010463,5.89257170947335,5.55249555116501,5.96478226640962,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.173485326766136,1.52232739156071,0.922461989024234,0.904335843315735,1.41106448562846,0.251333182659351,0,0.289198713839823,0,0.485300549842228,0,0,3.72783522436244,33.9625724533395,28.6941988334433,0.510914110417183,0,0,0,27.4116870110826,27.9075367719362,3.8952849154988,28.6810128317256,19.4343747571051,20.5710164113964,15.8996437806402,0.81471491080253,0.124406970610093,0.252722758433675,1.68353484709179,0.260240885925407,0,1.0803727788321,1.50704817835715,1.08858398642125,1.40925092313335,0.655912071918102,4.9153640440413,0,0,0.175951124163949,0.876782929710299,1.94633074457919,1.0447564995665,1.23469281844766,0.59710280045548,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,23.131894342054,6.89460902941206,0,0.264450566663544,0.639864751605702,1.39342003116263,0.38660238396628,1.00841762311671,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.38992817423824,1.79763881730844,0,0.597423819763102,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,18.6238684385839,14.8858841972098,0,0.757412781613119,0.631016438832513,0,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0,15.1021018718249,2.41298144854057,0.890328018336276,0.651547837414304,3.13443233647817,0,0,0,1.13163047853539,0.885905678642318,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0.177340233642274,0,0.658196082408484,0.913394847343798,0,0.21183207086382,0.661585194164886,0.8244312647074,0.161464426695906,0.361877549568935,0.477489376012546,0.164140899745061,0.291480836629851,14.8340241608408,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0.158167996790568,0,0.86404272657441,0.836353184057875,0.218362563746178,0.269728692769641,0.743881101528023,0.785267825952089,0.777689839750757,0.621339313086926,0.56369293868419,0,0,0.388902376688095,0,0.844780627453891,0.117357238645754,0.13020438484395,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,1.68914227906064,2.19781949120718,1.71494703263253,2.00628841614145,12.9892923801925,14.7304075682297,15.4681788628637,16.6697586873377,15.0718154349541,12.0863023582352,14.1754725048679,20.2644541450899,19.0319811773366,16.5683299760582,0.726511433089237,1.99512436700516,1.19513524027894,1.21553358534147,1.67690530102386,2.94149613520023,1.77797382241292,2.26638562962784,0.962757628775446,2.02157769411038,2.78827229879264,0.943131706930381,1.31098110457835,1.6646539625266,1.83793500657962,1.90517476513229,0.927074607558844,1.35036454324594,1.64834360321323,2.20798380201596,1.71434626192708,2.12970967391205,1.1921809497366,1.45346416632329,1.31753132581463,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,1.68342681497322,0.355905054372522,0.985044823755635,0.818462086339379,1.23949472948773,0.385813221962283,2.24829520144151,2.57324769289949,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264
|short_description=p4@Jph4
|short_description=p4@Jph4
}}
}}

Latest revision as of 03:27, 26 September 2015

Short description:p4@Jph4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Jph4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -60bp_to_ENSMUST00000133954_5end
EntrezGene:Jph4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Jph4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B233.96
cerebellum, neonate N30.CNhs11135.1395-42I228.69
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.41
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D528.68
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F220.57
diencephalon, neonate N30.CNhs11201.1388-42B215.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E823.13
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.62
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.19e-1923
neuroblast (sensu Vertebrata)1.19e-1923
neuron2.81e-1133
neuronal stem cell2.81e-1133
neuroblast2.81e-1133
electrically signaling cell2.81e-1133
electrically responsive cell2.01e-0839
electrically active cell2.01e-0839
neural cell5.27e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.09e-2854
gray matter1.63e-2734
neural tube9.20e-2752
neural rod9.20e-2752
future spinal cord9.20e-2752
neural keel9.20e-2752
neurectoderm1.26e-2564
neural plate1.26e-2564
presumptive neural plate1.26e-2564
central nervous system1.27e-2373
brain grey matter2.31e-2329
regional part of telencephalon2.31e-2329
telencephalon2.31e-2329
brain1.13e-2247
future brain1.13e-2247
nervous system1.55e-2275
regional part of brain1.09e-2146
ecto-epithelium1.90e-2073
pre-chordal neural plate5.91e-2049
ectoderm-derived structure2.89e-1995
ectoderm2.89e-1995
presumptive ectoderm2.89e-1995
anterior neural tube4.34e-1940
regional part of forebrain4.71e-1839
forebrain4.71e-1839
future forebrain4.71e-1839
cerebral cortex4.83e-1621
cerebral hemisphere4.83e-1621
pallium4.83e-1621
structure with developmental contribution from neural crest3.60e-1592
regional part of cerebral cortex6.46e-1317
occipital lobe2.33e-1110
visual cortex2.33e-1110
neocortex2.33e-1110
basal ganglion1.76e-088
nuclear complex of neuraxis1.76e-088
aggregate regional part of brain1.76e-088
collection of basal ganglia1.76e-088
cerebral subcortex1.76e-088
posterior neural tube3.31e-0812
chordal neural plate3.31e-0812
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