FFCP PHASE1:Hg19::chr11:35251412..35251420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_AK127622_5end | |association_with_transcript=-118bp_to_AK127622_5end | ||
|cluster_id=chr11:35251412..35251420,+ | |||
|description=CAGE_peak_31_at_CD44_5end | |description=CAGE_peak_31_at_CD44_5end | ||
|id=chr11:35251412..35251420,+ | |id=chr11:35251412..35251420,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.94e-10!42;CL:0002371!1.10e-09!591;CL:0002194!3.57e-09!63;CL:0000576!3.57e-09!63;CL:0000040!3.57e-09!63;CL:0000559!3.57e-09!63;CL:0002009!4.49e-09!65;CL:0000144!4.51e-09!625;CL:0000557!5.49e-09!71;CL:0000860!9.80e-09!45;CL:0000839!1.02e-08!70;CL:0000003!1.03e-08!722;CL:0000766!4.52e-08!76;CL:0000548!5.05e-07!679;CL:0000004!5.05e-07!679;CL:0000255!5.05e-07!679;CL:0000012!6.26e-07!682 | |ontology_enrichment_celltype=CL:0002057!2.94e-10!42;CL:0002371!1.10e-09!591;CL:0002194!3.57e-09!63;CL:0000576!3.57e-09!63;CL:0000040!3.57e-09!63;CL:0000559!3.57e-09!63;CL:0002009!4.49e-09!65;CL:0000144!4.51e-09!625;CL:0000557!5.49e-09!71;CL:0000860!9.80e-09!45;CL:0000839!1.02e-08!70;CL:0000003!1.03e-08!722;CL:0000766!4.52e-08!76;CL:0000548!5.05e-07!679;CL:0000004!5.05e-07!679;CL:0000255!5.05e-07!679;CL:0000012!6.26e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.05e-15;33!CL:0002057;5.05e-15;33!CL:0000473;7.40e-14;39!CL:0000234;7.40e-14;39!CL:0000135;4.95e-12;3!CL:0000388;4.95e-12;3!CL:0000499;2.06e-07;28!CL:0000153;6.57e-07;9!CL:0000447;6.57e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.63e-13,48;CL:0000234,6.63e-13,48;CL:0000860,6.78e-13,42;CL:0002057,6.78e-13,42;CL:0000135,1.09e-12,3;CL:0000388,1.09e-12,3;CL:0002194,1.08e-09,59;CL:0000576,1.08e-09,59;CL:0000040,1.08e-09,59;CL:0000559,1.08e-09,59;CL:0002009,2.79e-09,61;CL:0000766,1.29e-08,72;CL:0000839,2.32e-08,66;CL:0000557,3.41e-08,67;CL:0000499,1.39e-07,28;CL:0000153,6.62e-07,9;CL:0000447,6.62e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.04e-10!167;UBERON:0004765!1.14e-08!101;UBERON:0001434!1.14e-08!101;UBERON:0002371!1.96e-08!80;UBERON:0001474!2.59e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.95e-12;3!UBERON:0000043;4.95e-12;3!UBERON:0007845;4.95e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-12,3;UBERON:0000043,1.09e-12,3;UBERON:0007845,1.09e-12,3;UBERON:0001434,3.72e-08,100;UBERON:0002371,5.69e-08,76;UBERON:0002204,1.49e-07,167;UBERON:0004765,3.17e-07,90;UBERON:0001474,3.65e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,1.11389717664042,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0.684372125364421,0,0,0.0821005894499457,0,0.393364276848904,1.15148819429164,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.671746422719773,0,0.257575567634187,0.872389432677388,0,0.485168122375632,0.697287110717054,0.411167888021826,0.619412741790207,1.43846196161075,1.2808035326455,0.709446689665756,1.37898272294647,1.29096936716765,0,2.07066573496865,0.272906150057846,1.57306439111559,1.22433556948361,0.320929027076094,1.91801137739712,0.659702600373432,0.797854630486527,2.13112375266347,3.77272010217159,0.56738522469114,1.86846674698672,1.00499466102697,0,0.868755378820466,0.605399502633369,0.368277635987565,1.58231193720442,0,0,0.209658645508376,0.22465726229299,0.450530678524519,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,1.1384259382189,0,0,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0.812411591295047,0.384273959177026,0.520237390239513,0.822189523018381,0,0.289803085735052,0,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0.289648807765598,0,0,0,1.0843174571537,1.50401373190767,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0.728590576585084,0,0,0.348259474598534,0.664789802594326,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0.379891534993739,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.423863802319124,1.20036438433761,0.515262646192195,0.257640540045629,0.930584281657949,1.35021065793013,0.487185025805993,0.504867548488229,0.460249493211497,0.646584227275248,0.710019185033229,0.201504196455281,1.18692414617341,0.386521706326594,1.09098448236334,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0,0,0,0.784885860501384,0,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0.768251997860379,0,0.301586917234893,0.555530670951178,0.651616610620649,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,0.936017060556951,0.445893486866185,0.93733833986777,0.839910640994298,0.283550194484773,1.34337784054272,0.290633938513962,0.383382679165211,0,0.176096868026452,0.414656231081544,0.144119953416961,0.37872730027914,0.888970520090367,0,0,0,0.411309970813294,0.901029173531752,0.571652865261156,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0.904318131178758,0,0.799783929456456,0,0,4.21667878966063,0.479249710983165,0,0,0.579125226670317,0.61642896765115,0,0.224170287987055,0,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,1.42743191037729,0.630809660135739,0.117141414992713,0.601892199455438,0,0,0,0,0.868836144680828,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,1.48418066444991,0.154209693802656,0.710246901252508,0.410635780069046,0,0.348631135379878,0,0.802025881213139,0,1.37777337797528,0.364182336013434,0.786746489756545,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0,0,0,0.511795582622668,0.42793898803392,0,0.78494864019923,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,2.11300293513511,0.9554993798559,0.989838023675989,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0.405820753925408,1.54911749049875,0,0.286822704408103,0.294747123039363,0,0,1.47775344708365,1.31717957183961,0,0,0.769776901804097,0.670302275535787,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,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| ||
|short_description=p31@CD44 | |short_description=p31@CD44 | ||
}} | }} |
Latest revision as of 19:47, 17 September 2015
Short description: | p31@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | -118bp_to_AK127622_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.63e-13 | 48 |
phagocyte | 6.63e-13 | 48 |
classical monocyte | 6.78e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-13 | 42 |
fibrocyte | 1.09e-12 | 3 |
tendon cell | 1.09e-12 | 3 |
monopoietic cell | 1.08e-09 | 59 |
monocyte | 1.08e-09 | 59 |
monoblast | 1.08e-09 | 59 |
promonocyte | 1.08e-09 | 59 |
macrophage dendritic cell progenitor | 2.79e-09 | 61 |
myeloid leukocyte | 1.29e-08 | 72 |
myeloid lineage restricted progenitor cell | 2.32e-08 | 66 |
granulocyte monocyte progenitor cell | 3.41e-08 | 67 |
stromal cell | 1.39e-07 | 28 |
GAG secreting cell | 6.62e-07 | 9 |
carbohydrate secreting cell | 6.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-12 | 3 |
tendon | 1.09e-12 | 3 |
regular connective tissue | 1.09e-12 | 3 |
skeletal system | 3.72e-08 | 100 |
bone marrow | 5.69e-08 | 76 |
musculoskeletal system | 1.49e-07 | 167 |
skeletal element | 3.17e-07 | 90 |
bone element | 3.65e-07 | 82 |