FFCP PHASE1:Hg19::chr11:29339834..29339847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29339834..29339847,- | |||
|description=CAGE_peak_at_chr11:29339834..29339847,- | |description=CAGE_peak_at_chr11:29339834..29339847,- | ||
|id=chr11:29339834..29339847,- | |id=chr11:29339834..29339847,- | ||
|ontology_enrichment_celltype=CL:0000359!3.31e-16!32;CL:0000055!7.19e-14!180;CL:0000192!1.60e-13!42;CL:0000514!1.60e-13!42;CL:0000680!1.02e-11!57;CL:0000056!1.02e-11!57;CL:0000355!1.02e-11!57;CL:0000187!3.46e-10!54;CL:0000183!8.39e-10!59;CL:0002539!7.48e-09!10;CL:0000222!7.75e-09!119;CL:0000393!1.40e-08!60;CL:0000211!1.40e-08!60;CL:0000057!5.62e-07!75 | |ontology_enrichment_celltype=CL:0000359!3.31e-16!32;CL:0000055!7.19e-14!180;CL:0000192!1.60e-13!42;CL:0000514!1.60e-13!42;CL:0000680!1.02e-11!57;CL:0000056!1.02e-11!57;CL:0000355!1.02e-11!57;CL:0000187!3.46e-10!54;CL:0000183!8.39e-10!59;CL:0002539!7.48e-09!10;CL:0000222!7.75e-09!119;CL:0000393!1.40e-08!60;CL:0000211!1.40e-08!60;CL:0000057!5.62e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.89e-10;1!CL:0002625;1.89e-10;1!CL:0000216;1.89e-10;1!CL:0002174;6.32e-10;1!CL:0000222;6.32e-10;1!CL:0000501;6.32e-10;1!CL:0002539;1.48e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.98e-10,1;CL:0002625,1.98e-10,1;CL:0000216,1.98e-10,1;CL:0002174,4.06e-10,1;CL:0000501,4.06e-10,1;CL:0002539,1.37e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.59e-10;1!DOID:4235;6.32e-10;1!DOID:3571;6.32e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.16e-10,1;DOID:3571,3.40e-10,1;DOID:4235,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.72e-12!42;UBERON:0003509!3.72e-12!42;UBERON:0004572!3.72e-12!42;UBERON:0000914!9.42e-12!83;UBERON:0002329!9.42e-12!83;UBERON:0003077!9.42e-12!83;UBERON:0003059!9.42e-12!83;UBERON:0007282!9.42e-12!83;UBERON:0009618!9.42e-12!83;UBERON:0007285!9.42e-12!83;UBERON:0002049!3.23e-11!79;UBERON:0007798!3.23e-11!79;UBERON:0004573!1.39e-10!33;UBERON:0004571!1.39e-10!33;UBERON:0001134!1.65e-10!61;UBERON:0002036!1.65e-10!61;UBERON:0003082!1.65e-10!61;UBERON:0005256!4.45e-10!143;UBERON:0002385!5.73e-10!63;UBERON:0001015!5.73e-10!63;UBERON:0000383!5.73e-10!63;UBERON:0001981!6.72e-10!60;UBERON:0007500!6.72e-10!60;UBERON:0004537!6.72e-10!60;UBERON:0006965!6.72e-10!60;UBERON:0004290!3.66e-09!70;UBERON:0004872!4.46e-09!84;UBERON:0004237!7.48e-09!10;UBERON:0004695!7.48e-09!10;UBERON:0002111!7.48e-09!10;UBERON:0004178!7.48e-09!10;UBERON:0000055!1.31e-08!69;UBERON:0004535!1.72e-08!110;UBERON:0000486!2.32e-08!82;UBERON:0001009!4.79e-08!113;UBERON:0000488!1.55e-07!4;UBERON:0003914!3.01e-07!118;UBERON:0000947!3.63e-07!21;UBERON:0010191!3.63e-07!21;UBERON:0001135!8.32e-07!15;UBERON:0000490!8.67e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.89e-10;1!UBERON:0001343;1.89e-10;1!UBERON:0007195;1.89e-10;1!UBERON:0004910;1.89e-10;1!UBERON:0004813;1.89e-10;1!UBERON:0004237;1.48e-08;10!UBERON:0004695;1.48e-08;10!UBERON:0002111;1.48e-08;10!UBERON:0004178;1.48e-08;10!UBERON:0000947;5.77e-07;21!UBERON:0010191;5.77e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.80e-10,1;UBERON:0001136,1.98e-10,1;UBERON:0001343,1.98e-10,1;UBERON:0004910,1.98e-10,1;UBERON:0005154,1.98e-10,1;UBERON:0005295,1.98e-10,1;UBERON:0004813,1.98e-10,1;UBERON:0005297,1.98e-10,1;UBERON:0005294,1.98e-10,1;UBERON:0010141,1.98e-10,1;UBERON:0005891,1.98e-10,1;UBERON:0004237,1.37e-08,10;UBERON:0004695,1.37e-08,10;UBERON:0002111,1.37e-08,10;UBERON:0004178,1.37e-08,10;UBERON:0000947,5.68e-07,21;UBERON:0010191,5.68e-07,21 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,2.41077811209591,4.38186054232424,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,1.10864698731282,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,2.1185468930115,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.61417158655884,0,1.18800285728205,0,0,0,0.168336113954066,0,0.831192346452549,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.646584227275248,0,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0.602878754119172,1.74306691720059,0.499864955910285,0,0,0,0.239624855491583,0,0,2.46128221334885,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,1.45672934405374,0.655622074797121,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0.37064843820784,1.14499909393593,0,1.2655176988749,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.974853958525138,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0.286822704408103,0.982490410131212,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,2.14764233254525,0,2.48831670129446,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.50940741051545,0,0.457680136793847,0.151230923763239,0,0,0.477890301491107,0,0,0,0,0.521745061811734,0.300515217994437,0.761610424337591,0,0.545545977607678,0,0,0.796191777397232,1.20008329398946,0,0,1.26184898228651,0,0,0,0.453411851024545,0.463044948647668,0,0.895444205407437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,2.41077811209591,4.38186054232424,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.472674085820339,1.10864698731282,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,2.1185468930115,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.61417158655884,0,1.18800285728205,0,0,0,0.168336113954066,0,0.831192346452549,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.646584227275248,0,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0.602878754119172,1.74306691720059,0.499864955910285,0,0,0,0.239624855491583,0,0,2.46128221334885,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0,0.902838299183157,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,1.45672934405374,0.655622074797121,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0.464845549297286,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0.37064843820784,1.14499909393593,0,1.2655176988749,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.974853958525138,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0.286822704408103,0.982490410131212,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,2.14764233254525,0,2.48831670129446,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.50940741051545,0,0.457680136793847,0.151230923763239,0,0,0.477890301491107,0,0,0,0,0.521745061811734,0.300515217994437,0.761610424337591,0,0.545545977607678,0,0,0.796191777397232,1.20008329398946,0,0,1.26184898228651,0,0,0,0.453411851024545,0.463044948647668,0,0.895444205407437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:29339834..29339847,- | |short_description=p@chr11:29339834..29339847,- | ||
}} | }} |
Latest revision as of 21:23, 23 July 2015
Short description: | p@chr11:29339834..29339847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29339834..29339847, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.98e-10 | 1 |
seminiferous tubule epithelial cell | 1.98e-10 | 1 |
Sertoli cell | 1.98e-10 | 1 |
follicular cell of ovary | 4.06e-10 | 1 |
granulosa cell | 4.06e-10 | 1 |
aortic smooth muscle cell | 1.37e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.80e-10 | 1 |
mesothelium | 1.98e-10 | 1 |
seminiferous tubule of testis | 1.98e-10 | 1 |
epithelium of male gonad | 1.98e-10 | 1 |
epithelial cord | 1.98e-10 | 1 |
sex cord | 1.98e-10 | 1 |
seminiferous tubule epithelium | 1.98e-10 | 1 |
testis sex cord | 1.98e-10 | 1 |
genital ridge | 1.98e-10 | 1 |
primitive sex cord of indifferent gonad | 1.98e-10 | 1 |
coelomic epithelium | 1.98e-10 | 1 |
blood vessel smooth muscle | 1.37e-08 | 10 |
arterial system smooth muscle | 1.37e-08 | 10 |
artery smooth muscle tissue | 1.37e-08 | 10 |
aorta smooth muscle tissue | 1.37e-08 | 10 |
aorta | 5.68e-07 | 21 |
aortic system | 5.68e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.16e-10 | 1 |
liver cancer | 3.40e-10 | 1 |
spindle cell sarcoma | 8.24e-10 | 1 |