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FFCP PHASE1:Mm9::chr13:96902498..96902522,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75209
|EntrezGene=75209
|HGNC=
|HGNC=
|MCL_coexpression_id=464
|TSSclassifier=NA
|UniProt=Q69ZS6
|UniProt=Q69ZS6
|association_with_transcript=9bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end
|association_with_transcript=9bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end
|cluster_id=chr13:96902498..96902522,-
|description=CAGE_peak_2_at_Sv2c_5end
|description=CAGE_peak_2_at_Sv2c_5end
|id=chr13:96902498..96902522,-
|id=chr13:96902498..96902522,-
|ontology_enrichment_celltype=CL:0000540!1.10e-09!33;CL:0000047!1.10e-09!33;CL:0000031!1.10e-09!33;CL:0000404!1.10e-09!33;CL:0000117!1.48e-08!23;CL:0000337!1.48e-08!23;CL:0000221!2.83e-07!44;CL:0000133!2.83e-07!44;CL:0002319!3.85e-07!43
|ontology_enrichment_celltype=CL:0000540!1.10e-09!33;CL:0000047!1.10e-09!33;CL:0000031!1.10e-09!33;CL:0000404!1.10e-09!33;CL:0000117!1.48e-08!23;CL:0000337!1.48e-08!23;CL:0000221!2.83e-07!44;CL:0000133!2.83e-07!44;CL:0002319!3.85e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-09,23;CL:0000337,1.26e-09,23;CL:0000540,8.73e-09,33;CL:0000047,8.73e-09,33;CL:0000031,8.73e-09,33;CL:0000404,8.73e-09,33;CL:0002319,1.99e-07,43;CL:0000221,4.42e-07,44;CL:0000133,4.42e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.06e-19!102;UBERON:0000924!5.06e-19!102;UBERON:0006601!5.06e-19!102;UBERON:0000073!1.83e-17!75;UBERON:0001016!1.83e-17!75;UBERON:0002346!2.25e-16!71;UBERON:0003075!2.25e-16!71;UBERON:0007284!2.25e-16!71;UBERON:0001017!3.08e-16!73;UBERON:0005743!3.08e-16!73;UBERON:0000033!1.86e-12!63;UBERON:0001049!6.52e-12!52;UBERON:0005068!6.52e-12!52;UBERON:0006241!6.52e-12!52;UBERON:0007135!6.52e-12!52;UBERON:0000955!1.60e-10!50;UBERON:0006238!1.60e-10!50;UBERON:0002616!5.63e-10!49;UBERON:0002020!1.10e-09!34;UBERON:0003056!1.13e-09!49;UBERON:0003080!2.05e-07!40;UBERON:0002780!6.13e-07!39;UBERON:0001890!6.13e-07!39;UBERON:0006240!6.13e-07!39;UBERON:0002791!9.60e-07!29;UBERON:0003528!9.60e-07!29;UBERON:0001893!9.60e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.75e-21,75;UBERON:0001017,4.10e-19,73;UBERON:0004121,2.44e-18,95;UBERON:0000924,2.44e-18,95;UBERON:0006601,2.44e-18,95;UBERON:0000073,6.39e-17,54;UBERON:0002346,2.78e-16,64;UBERON:0003075,2.78e-16,64;UBERON:0007284,2.78e-16,64;UBERON:0001049,1.88e-15,52;UBERON:0005068,1.88e-15,52;UBERON:0006241,1.88e-15,52;UBERON:0007135,1.88e-15,52;UBERON:0010371,2.07e-12,73;UBERON:0002020,4.97e-12,34;UBERON:0000955,2.22e-11,47;UBERON:0006238,2.22e-11,47;UBERON:0003056,6.82e-11,49;UBERON:0002616,1.14e-10,46;UBERON:0010314,1.17e-10,92;UBERON:0003076,9.84e-09,12;UBERON:0003057,9.84e-09,12;UBERON:0003080,1.00e-08,40;UBERON:0002780,4.27e-08,39;UBERON:0001890,4.27e-08,39;UBERON:0006240,4.27e-08,39;UBERON:0003528,4.71e-08,29;UBERON:0002791,4.71e-08,29;UBERON:0001893,4.71e-08,29;UBERON:0002240,1.76e-07,6;UBERON:0005174,1.76e-07,6;UBERON:0001137,1.76e-07,6;UBERON:0002420,4.15e-07,8;UBERON:0007245,4.15e-07,8;UBERON:0010009,4.15e-07,8;UBERON:0010011,4.15e-07,8;UBERON:0000454,4.15e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.55129870453209,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,5.05791152148994,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.420649922702764,29.136400409188,18.3320888989839,0.489963196859816,0.287536413054709,0,6.60695285996332,10.5980490610706,14.2854075928306,1.45074916503213,2.56165402086747,3.64639359389732,15.355064945076,10.6924895906019,14.0574387954665,24.7488011797881,26.1963892670349,22.5543329448614,23.0964889666211,5.2144376473682,0,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0.890652834388949,4.16364784238726,3.95805121805784,2.7673859670727,3.76806601381556,5.76184664964954,0,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,10.8328894894272,11.1006754611131,0.255457055208591,0.359445373517761,0,0.127070227073065,8.83764772488454,22.4175295381127,2.63874139437015,5.21472960576829,6.39288643325826,12.0517065844545,15.7374025175725,0.916554274652847,0.124406970610093,0,0.420883711772948,0.520481771850815,1.14951052216736,1.80062129805349,1.9591626318643,3.06164246180975,3.20284300712124,1.68663104207512,3.62184719034622,0.215567992932842,0.378212160335639,0.703804496655795,0,1.66828349535359,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0.900310307305074,0.710234206755631,0.393528463494808,0.308534225774757,0,0.804820204198858,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,3.78521907415429,1.23485534855141,0.660837565967596,0.264450566663544,0,0.464473343720877,0.515469845288373,0.201683524623343,0.444756087689741,1.52180500890047,0.474529061544512,0.823494773620054,1.50801125280162,0.994782360205754,0.779856348476481,0,0.216138049874694,0,0.189667900953082,1.82797620175566,0,0.407302655690628,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0.502518772325447,0.714130922658041,0,0.472905432318573,0.44292937929755,0,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,37.5688380571433,35.6323527240298,0,0,0.94652465824877,0.390438744296638,0.215423397732799,1.91175038362042,2.22798674082394,4.52922449262132,0.809621403349789,1.46127928955656,1.18586333383957,13.1741739732941,0.567760340833074,1.06839362200353,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,1.42695054081656,1.31639216481697,2.13125464380219,0.469343416127421,0,1.32317038832977,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,0.582961673259701,50.9919580528902,0.170870880797853,0,0,0,0,0,1.01987057996313,1.25956307091292,1.10559979043539,0,0.158167996790568,1.01659733563424,1.18805874903981,1.46361807210128,1.09181281873089,2.15782954215713,2.39695021603474,0.523511883968059,0.129614973291793,0,0,0,0,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.5208175393758,0.629156066554265,0.241584120826006,0.576060012515731,0,0,0.410843828659309,0,0.537080087002444,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,1.6942555278512,3.68260189205742,3.43737308063638,1.89038500578056,2.74033007908257,2.2661816921691,2.70009000092722,1.35096360967266,2.26571204492102,2.5888015587591,0.726511433089237,1.59609949360412,2.04880326904961,0.729320151204882,1.88651846365184,3.30918315210025,2.22246727801615,1.44224540067226,1.60459604795908,2.02157769411038,2.28131369901216,2.82939512079114,1.96647165686753,2.30490548657529,2.23998328926892,2.85776214769844,2.78122382267653,1.73618298417335,2.47251540481984,2.94397840268795,1.37147700954166,1.59728225543404,0.715308569841963,3.19762116591123,2.72917203204459,2.03075058940024,3.47563148458268,1.31534855718921,2.30866993537965,1.68342681497322,1.89816028998679,1.37906275325789,0.818462086339379,2.16911577660352,1.15743966588685,2.24829520144151,2.33931608445408,1.71896843238639,2.67803664896381,1.10295709559758,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.55129870453209,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,5.05791152148994,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.420649922702764,29.136400409188,18.3320888989839,0.489963196859816,0.287536413054709,0,6.60695285996332,10.5980490610706,14.2854075928306,1.45074916503213,2.56165402086747,3.64639359389732,15.355064945076,10.6924895906019,14.0574387954665,24.7488011797881,26.1963892670349,22.5543329448614,23.0964889666211,5.2144376473682,0,0,0,0,0,0,0.702222100658759,0,0,0,0.985903938436763,0,0,0,0,0,0,0.5709193985953,0,0.890652834388949,4.16364784238726,3.95805121805784,2.7673859670727,3.76806601381556,5.76184664964954,0,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,10.8328894894272,11.1006754611131,0.255457055208591,0.359445373517761,0,0.127070227073065,8.83764772488454,22.4175295381127,2.63874139437015,5.21472960576829,6.39288643325826,12.0517065844545,15.7374025175725,0.916554274652847,0.124406970610093,0,0.420883711772948,0.520481771850815,1.14951052216736,1.80062129805349,1.9591626318643,3.06164246180975,3.20284300712124,1.68663104207512,3.62184719034622,0.215567992932842,0.378212160335639,0.703804496655795,0,1.66828349535359,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0,0,0.900310307305074,0.710234206755631,0.393528463494808,0.308534225774757,0,0.804820204198858,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,3.78521907415429,1.23485534855141,0.660837565967596,0.264450566663544,0,0.464473343720877,0.515469845288373,0.201683524623343,0.444756087689741,1.52180500890047,0.474529061544512,0.823494773620054,1.50801125280162,0.994782360205754,0.779856348476481,0,0.216138049874694,0,0.189667900953082,1.82797620175566,0,0.407302655690628,0.387904974335251,0.49095073923223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0.502518772325447,0.714130922658041,0,0.472905432318573,0.44292937929755,0,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,37.5688380571433,35.6323527240298,0,0,0.94652465824877,0.390438744296638,0.215423397732799,1.91175038362042,2.22798674082394,4.52922449262132,0.809621403349789,1.46127928955656,1.18586333383957,13.1741739732941,0.567760340833074,1.06839362200353,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,1.42695054081656,1.31639216481697,2.13125464380219,0.469343416127421,0,1.32317038832977,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,0.582961673259701,50.9919580528902,0.170870880797853,0,0,0,0,0,1.01987057996313,1.25956307091292,1.10559979043539,0,0.158167996790568,1.01659733563424,1.18805874903981,1.46361807210128,1.09181281873089,2.15782954215713,2.39695021603474,0.523511883968059,0.129614973291793,0,0,0,0,0.194451188344048,0.516639293910924,0.168956125490778,0.58678619322877,0.5208175393758,0.629156066554265,0.241584120826006,0.576060012515731,0,0,0.410843828659309,0,0.537080087002444,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,1.6942555278512,3.68260189205742,3.43737308063638,1.89038500578056,2.74033007908257,2.2661816921691,2.70009000092722,1.35096360967266,2.26571204492102,2.5888015587591,0.726511433089237,1.59609949360412,2.04880326904961,0.729320151204882,1.88651846365184,3.30918315210025,2.22246727801615,1.44224540067226,1.60459604795908,2.02157769411038,2.28131369901216,2.82939512079114,1.96647165686753,2.30490548657529,2.23998328926892,2.85776214769844,2.78122382267653,1.73618298417335,2.47251540481984,2.94397840268795,1.37147700954166,1.59728225543404,0.715308569841963,3.19762116591123,2.72917203204459,2.03075058940024,3.47563148458268,1.31534855718921,2.30866993537965,1.68342681497322,1.89816028998679,1.37906275325789,0.818462086339379,2.16911577660352,1.15743966588685,2.24829520144151,2.33931608445408,1.71896843238639,2.67803664896381,1.10295709559758,0.927471342481686
|short_description=p2@Sv2c
|short_description=p2@Sv2c
}}
}}

Latest revision as of 14:01, 25 September 2015

Short description:p2@Sv2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sv2c_5end
Coexpression cluster:MCL_coexpression_mm9:464
Association with transcript: 9bp_to_ENSMUST00000161263, NM_029210, uc007rmt.2_5end
EntrezGene:Sv2c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sv2c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D923.10
Mouse Schwann, donor2.CNhs12573.11746-123F95.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I211.10
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C237.57
medulla oblongata, neonate N30.CNhs11200.1396-42A335.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C950.99
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.26e-0923
neuroblast (sensu Vertebrata)1.26e-0923
neuron8.73e-0933
neuronal stem cell8.73e-0933
neuroblast8.73e-0933
electrically signaling cell8.73e-0933
neural cell1.99e-0743
ectodermal cell4.42e-0744
neurectodermal cell4.42e-0744

Uber anatomy
Ontology termp-valuen
nervous system9.75e-2175
central nervous system4.10e-1973
ectoderm-derived structure2.44e-1895
ectoderm2.44e-1895
presumptive ectoderm2.44e-1895
regional part of nervous system6.39e-1754
neurectoderm2.78e-1664
neural plate2.78e-1664
presumptive neural plate2.78e-1664
neural tube1.88e-1552
neural rod1.88e-1552
future spinal cord1.88e-1552
neural keel1.88e-1552
ecto-epithelium2.07e-1273
gray matter4.97e-1234
brain2.22e-1147
future brain2.22e-1147
pre-chordal neural plate6.82e-1149
regional part of brain1.14e-1046
structure with developmental contribution from neural crest1.17e-1092
posterior neural tube9.84e-0912
chordal neural plate9.84e-0912
anterior neural tube1.00e-0840
regional part of forebrain4.27e-0839
forebrain4.27e-0839
future forebrain4.27e-0839
brain grey matter4.71e-0829
regional part of telencephalon4.71e-0829
telencephalon4.71e-0829
spinal cord1.76e-076
dorsal region element1.76e-076
dorsum1.76e-076
basal ganglion4.15e-078
nuclear complex of neuraxis4.15e-078
aggregate regional part of brain4.15e-078
collection of basal ganglia4.15e-078
cerebral subcortex4.15e-078
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