FFCP PHASE1:Mm9::chr13:5863551..5863560,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:5863551..5863560,- | |||
|description=CAGE_peak_at_chr13:5863551..5863560,- | |description=CAGE_peak_at_chr13:5863551..5863560,- | ||
|id=chr13:5863551..5863560,- | |id=chr13:5863551..5863560,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,7.74e-19,1;CL:0000792,7.74e-19,1;CL:0000213,1.16e-18,1;CL:0002078,1.16e-18,1;CL:0000115,1.16e-18,1;CL:0002262,1.16e-18,1;CL:1000398,1.16e-18,1;CL:0000624,1.08e-09,8;CL:0000791,1.00e-08,9;CL:0000789,1.00e-08,9;CL:0002420,1.00e-08,9;CL:0002419,1.00e-08,9;CL:0000790,1.00e-08,9;CL:0000084,2.59e-07,11;CL:0000827,2.59e-07,11;CL:0000215,4.17e-07,3;CL:0000838,8.83e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.16e-18,1;UBERON:0001281,1.16e-18,1;UBERON:0000353,1.16e-18,1;UBERON:0003497,1.16e-18,1;UBERON:0003909,1.16e-18,1;UBERON:0003928,1.16e-18,1;UBERON:0003835,1.16e-18,1;UBERON:0003513,1.16e-18,1;UBERON:0001280,1.16e-18,1;UBERON:0004647,1.16e-18,1;UBERON:0002294,1.16e-18,1;UBERON:0001173,1.16e-18,1;UBERON:0004912,1.16e-18,1;UBERON:0005171,1.16e-18,1 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0,0,0,0,1.02720437958723,0.874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,4.70585190424811,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.377857800533928,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.49465875882444,0.161464426695906,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0,0,0,0,1.02720437958723,0.874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,4.70585190424811,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.377857800533928,1.15945795480671,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.49465875882444,0.161464426695906,0,0,0.328281799490123,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:5863551..5863560,- | |short_description=p@chr13:5863551..5863560,- | ||
}} | }} |
Latest revision as of 05:09, 6 August 2015
Short description: | p@chr13:5863551..5863560, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:5863551..5863560, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 7.74e-19 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.74e-19 | 1 |
lining cell | 1.16e-18 | 1 |
meso-epithelial cell | 1.16e-18 | 1 |
endothelial cell | 1.16e-18 | 1 |
endothelial cell of sinusoid | 1.16e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.16e-18 | 1 |
CD4-positive, alpha-beta T cell | 1.08e-09 | 8 |
mature alpha-beta T cell | 1.00e-08 | 9 |
alpha-beta T cell | 1.00e-08 | 9 |
immature T cell | 1.00e-08 | 9 |
mature T cell | 1.00e-08 | 9 |
immature alpha-beta T cell | 1.00e-08 | 9 |
T cell | 2.59e-07 | 11 |
pro-T cell | 2.59e-07 | 11 |
barrier cell | 4.17e-07 | 3 |
lymphoid lineage restricted progenitor cell | 8.83e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.16e-18 | 1 |
hepatic sinusoid | 1.16e-18 | 1 |
parenchyma | 1.16e-18 | 1 |
abdomen blood vessel | 1.16e-18 | 1 |
sinusoid | 1.16e-18 | 1 |
digestive system duct | 1.16e-18 | 1 |
abdominal segment blood vessel | 1.16e-18 | 1 |
trunk blood vessel | 1.16e-18 | 1 |
liver parenchyma | 1.16e-18 | 1 |
liver lobule | 1.16e-18 | 1 |
biliary system | 1.16e-18 | 1 |
biliary tree | 1.16e-18 | 1 |
biliary bud | 1.16e-18 | 1 |
hepatic duct | 1.16e-18 | 1 |