Personal tools

FFCP PHASE1:Mm9::chr13:46597406..46597417,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67252
|EntrezGene=67252
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3YTR7
|UniProt=D3YTR7
|association_with_transcript=-76bp_to_ENSMUST00000119341_5end
|association_with_transcript=-76bp_to_ENSMUST00000119341_5end
|cluster_id=chr13:46597406..46597417,+
|description=CAGE_peak_5_at_Cap2_5end
|description=CAGE_peak_5_at_Cap2_5end
|id=chr13:46597406..46597417,+
|id=chr13:46597406..46597417,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!2.42e-13!50;UBERON:0006238!2.42e-13!50;UBERON:0002616!7.65e-13!49;UBERON:0001049!1.21e-12!52;UBERON:0005068!1.21e-12!52;UBERON:0006241!1.21e-12!52;UBERON:0007135!1.21e-12!52;UBERON:0002791!1.36e-12!29;UBERON:0003528!1.36e-12!29;UBERON:0001893!1.36e-12!29;UBERON:0002020!8.08e-12!34;UBERON:0002346!1.58e-11!71;UBERON:0003075!1.58e-11!71;UBERON:0007284!1.58e-11!71;UBERON:0003080!5.84e-11!40;UBERON:0000956!6.45e-11!21;UBERON:0001869!6.45e-11!21;UBERON:0000203!6.45e-11!21;UBERON:0002780!2.05e-10!39;UBERON:0001890!2.05e-10!39;UBERON:0006240!2.05e-10!39;UBERON:0000033!2.52e-10!63;UBERON:0001017!5.83e-10!73;UBERON:0005743!5.83e-10!73;UBERON:0003056!6.08e-10!49;UBERON:0002619!1.52e-09!17;UBERON:0000073!3.66e-09!75;UBERON:0001016!3.66e-09!75;UBERON:0002021!6.19e-09!10;UBERON:0000411!6.19e-09!10;UBERON:0001950!6.19e-09!10;UBERON:0004121!5.11e-07!102;UBERON:0000924!5.11e-07!102;UBERON:0006601!5.11e-07!102;UBERON:0000468!8.32e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.04e-17,10;UBERON:0000411,1.04e-17,10;UBERON:0001950,1.04e-17,10;UBERON:0000955,1.40e-15,47;UBERON:0006238,1.40e-15,47;UBERON:0002616,1.12e-14,46;UBERON:0000073,6.37e-14,54;UBERON:0001049,1.91e-13,52;UBERON:0005068,1.91e-13,52;UBERON:0006241,1.91e-13,52;UBERON:0007135,1.91e-13,52;UBERON:0010314,7.64e-13,92;UBERON:0003528,1.44e-12,29;UBERON:0002791,1.44e-12,29;UBERON:0001893,1.44e-12,29;UBERON:0003080,9.60e-12,40;UBERON:0002619,1.92e-11,17;UBERON:0002780,8.23e-11,39;UBERON:0001890,8.23e-11,39;UBERON:0006240,8.23e-11,39;UBERON:0000956,1.75e-10,21;UBERON:0001869,1.75e-10,21;UBERON:0000203,1.75e-10,21;UBERON:0001017,2.94e-10,73;UBERON:0002020,4.88e-10,34;UBERON:0001016,8.69e-10,75;UBERON:0002346,1.19e-09,64;UBERON:0003075,1.19e-09,64;UBERON:0007284,1.19e-09,64;UBERON:0000025,1.33e-08,114;UBERON:0003056,1.35e-08,49;UBERON:0010371,1.16e-07,73;UBERON:0004111,1.84e-07,122;UBERON:0002950,7.24e-07,4;UBERON:0001891,7.24e-07,4;UBERON:0009616,7.24e-07,4;UBERON:0010286,7.24e-07,4;UBERON:0007100,8.20e-07,18;UBERON:0000948,8.20e-07,18;UBERON:0005498,8.20e-07,18;UBERON:0004140,8.20e-07,18;UBERON:0009881,8.20e-07,18;UBERON:0004141,8.20e-07,18;UBERON:0003084,8.20e-07,18;UBERON:0007005,8.20e-07,18;UBERON:0004139,8.20e-07,18;UBERON:0004291,8.20e-07,18
|phase1_expression=0,0,0.454999239389536,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.810035629990144,0.420649922702764,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0.919218786610021,0,1.14918604276669,2.15049146558741,0.263772575460388,0.182975287204819,0,2.23346399201105,3.37657566019008,1.5279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.04946557908083,2.09446706813455,0,0,0,0,1.79748767285787,6.40500843946077,0.753926112677186,4.86708096538374,5.62574006126727,4.77912502486988,2.92034273521964,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0.720248519221397,0,0.476255494059295,0.2562274405697,0.374806898238915,0.258703370739016,0,0.567318240503458,0.351902248327898,1.09597866213787,0.834141747676794,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,1.65700618028402,1.17263029990548,2.70093092191522,3.78791576936336,1.37734962223183,2.46827380619805,1.86027155800326,1.60964040839772,1.28441876603886,2.13927804887525,0.985004784474571,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,7.57043814830858,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0,1.26235463602186,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.422190474497091,0,0.492422699235184,0,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0,0.774958940866387,0.337912250981556,0,0.39061315453185,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0,8.471277639256,5.06357760157895,6.87474616127276,5.15559547031063,3.42541259885321,7.55393897389701,4.72515750162264,5.40385443869065,8.60970577069989,7.7664046762773,0.518936737920883,1.19707462020309,0.853668028770671,1.21553358534147,0.419226325255965,0.919217542250071,0.666740183404846,1.23621034343337,1.60459604795908,0.758091635291392,1.01391719956096,1.50901073108861,0.561849044819294,0.960377286073039,1.14870937911227,2.38146845641537,1.73826488917283,0.964546102318525,0.412085900803307,1.17759136107518,0.685738504770831,0.532427418478012,0.953744759789284,1.45346416632329,0.846984423737976,0.846146078916765,1.09756783723664,0.526139422875686,0.679020569229309,0.561142271657738,1.42362021749009,1.18205378850676,1.22769312950907,1.08455788830176,1.35034627686799,1.99848462350357,0.701794825336225,0.429742108096597,1.14772999241306,0.882365676478062,0.695603506861264
|phase1_expression=0,0,0.454999239389536,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.810035629990144,0.420649922702764,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0.919218786610021,0,1.14918604276669,2.15049146558741,0.263772575460388,0.182975287204819,0,2.23346399201105,3.37657566019008,1.5279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.04946557908083,2.09446706813455,0,0,0,0,1.79748767285787,6.40500843946077,0.753926112677186,4.86708096538374,5.62574006126727,4.77912502486988,2.92034273521964,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0.720248519221397,0,0.476255494059295,0.2562274405697,0.374806898238915,0.258703370739016,0,0.567318240503458,0.351902248327898,1.09597866213787,0.834141747676794,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,1.65700618028402,1.17263029990548,2.70093092191522,3.78791576936336,1.37734962223183,2.46827380619805,1.86027155800326,1.60964040839772,1.28441876603886,2.13927804887525,0.985004784474571,0.0810688095458557,0.292399974850665,0.439100230582101,0.268412837520744,7.57043814830858,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,1.44495530989013,1.52375192569864,0,1.26235463602186,0.631016438832513,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.16488625294148,0.322928853391811,0.422190474497091,0,0.492422699235184,0,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0,0.774958940866387,0.337912250981556,0,0.39061315453185,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0,8.471277639256,5.06357760157895,6.87474616127276,5.15559547031063,3.42541259885321,7.55393897389701,4.72515750162264,5.40385443869065,8.60970577069989,7.7664046762773,0.518936737920883,1.19707462020309,0.853668028770671,1.21553358534147,0.419226325255965,0.919217542250071,0.666740183404846,1.23621034343337,1.60459604795908,0.758091635291392,1.01391719956096,1.50901073108861,0.561849044819294,0.960377286073039,1.14870937911227,2.38146845641537,1.73826488917283,0.964546102318525,0.412085900803307,1.17759136107518,0.685738504770831,0.532427418478012,0.953744759789284,1.45346416632329,0.846984423737976,0.846146078916765,1.09756783723664,0.526139422875686,0.679020569229309,0.561142271657738,1.42362021749009,1.18205378850676,1.22769312950907,1.08455788830176,1.35034627686799,1.99848462350357,0.701794825336225,0.429742108096597,1.14772999241306,0.882365676478062,0.695603506861264
|short_description=p5@Cap2
|short_description=p5@Cap2
}}
}}

Latest revision as of 16:05, 1 October 2015

Short description:p5@Cap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Cap2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -76bp_to_ENSMUST00000119341_5end
EntrezGene:Cap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Cap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.04e-1710
visual cortex1.04e-1710
neocortex1.04e-1710
brain1.40e-1547
future brain1.40e-1547
regional part of brain1.12e-1446
regional part of nervous system6.37e-1454
neural tube1.91e-1352
neural rod1.91e-1352
future spinal cord1.91e-1352
neural keel1.91e-1352
structure with developmental contribution from neural crest7.64e-1392
brain grey matter1.44e-1229
regional part of telencephalon1.44e-1229
telencephalon1.44e-1229
anterior neural tube9.60e-1240
regional part of cerebral cortex1.92e-1117
regional part of forebrain8.23e-1139
forebrain8.23e-1139
future forebrain8.23e-1139
cerebral cortex1.75e-1021
cerebral hemisphere1.75e-1021
pallium1.75e-1021
central nervous system2.94e-1073
gray matter4.88e-1034
nervous system8.69e-1075
neurectoderm1.19e-0964
neural plate1.19e-0964
presumptive neural plate1.19e-0964
tube1.33e-08114
pre-chordal neural plate1.35e-0849
ecto-epithelium1.16e-0773
anatomical conduit1.84e-07122
regional part of midbrain7.24e-074
midbrain7.24e-074
presumptive midbrain7.24e-074
midbrain neural tube7.24e-074
primary circulatory organ8.20e-0718
heart8.20e-0718
primitive heart tube8.20e-0718
primary heart field8.20e-0718
anterior lateral plate mesoderm8.20e-0718
heart tube8.20e-0718
heart primordium8.20e-0718
cardiac mesoderm8.20e-0718
cardiogenic plate8.20e-0718
heart rudiment8.20e-0718
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:46597406..46597417,%2B&oldid=4310790"