FFCP PHASE1:Hg19::chr11:124492736..124492748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84897 | |EntrezGene=84897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29551 | |HGNC=29551 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YBR2 | |UniProt=Q3YBR2 | ||
|association_with_transcript=0bp_to_NM_032811,NR_016021,uc001qaj.3,uc001qak.3,uc001qal.3,uc001qam.3,uc009zbf.2,uc009zbg.2_5end | |association_with_transcript=0bp_to_NM_032811,NR_016021,uc001qaj.3,uc001qak.3,uc001qal.3,uc001qam.3,uc009zbf.2,uc009zbg.2_5end | ||
|cluster_id=chr11:124492736..124492748,+ | |||
|description=CAGE_peak_2_at_TBRG1_5end | |description=CAGE_peak_2_at_TBRG1_5end | ||
|id=chr11:124492736..124492748,+ | |id=chr11:124492736..124492748,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.36e-22!57;UBERON:0005068!9.36e-22!57;UBERON:0006241!9.36e-22!57;UBERON:0007135!9.36e-22!57;UBERON:0002780!2.42e-21!41;UBERON:0001890!2.42e-21!41;UBERON:0006240!2.42e-21!41;UBERON:0003080!3.40e-20!42;UBERON:0002346!1.04e-19!90;UBERON:0003075!5.04e-19!86;UBERON:0007284!5.04e-19!86;UBERON:0002616!2.30e-18!59;UBERON:0001017!4.51e-18!82;UBERON:0000073!5.13e-18!94;UBERON:0001016!5.13e-18!94;UBERON:0005743!9.41e-18!86;UBERON:0001893!2.33e-17!34;UBERON:0002020!3.41e-17!34;UBERON:0003528!3.41e-17!34;UBERON:0002791!9.51e-17!33;UBERON:0001869!1.18e-16!32;UBERON:0003056!1.40e-15!61;UBERON:0000955!2.18e-15!69;UBERON:0006238!2.18e-15!69;UBERON:0002619!3.93e-14!22;UBERON:0001950!1.75e-13!20;UBERON:0000956!1.03e-12!25;UBERON:0000203!1.03e-12!25;UBERON:0000924!4.83e-12!173;UBERON:0006601!4.83e-12!173;UBERON:0004121!2.02e-11!169;UBERON:0007023!3.66e-11!115;UBERON:0000153!2.99e-10!129;UBERON:0007811!2.99e-10!129;UBERON:0000033!3.81e-10!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.46e-16;41!UBERON:0001890;2.46e-16;41!UBERON:0002791;8.24e-16;32!UBERON:0001869;8.33e-16;32!UBERON:0001893;1.24e-15;34!UBERON:0003528;3.04e-15;34!UBERON:0002020;3.04e-15;34!UBERON:0002619;7.15e-15;22!UBERON:0001950;3.44e-14;20!UBERON:0000956;3.01e-13;25!UBERON:0000203;3.01e-13;25!UBERON:0000073;2.60e-12;53!UBERON:0002616;2.60e-12;53!UBERON:0001017;2.49e-09;75!UBERON:0000955;1.02e-07;68!UBERON:0001016;5.03e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.09e-23,56;UBERON:0005068,5.09e-23,56;UBERON:0006241,5.09e-23,56;UBERON:0007135,5.09e-23,56;UBERON:0002780,9.04e-22,41;UBERON:0001890,9.04e-22,41;UBERON:0003080,9.04e-22,41;UBERON:0006240,9.04e-22,41;UBERON:0000073,2.53e-21,53;UBERON:0002616,2.53e-21,53;UBERON:0002346,7.51e-20,86;UBERON:0001016,3.52e-19,89;UBERON:0003075,3.69e-19,82;UBERON:0007284,3.69e-19,82;UBERON:0001017,5.86e-19,81;UBERON:0001893,1.06e-17,34;UBERON:0003528,1.57e-17,34;UBERON:0002020,1.57e-17,34;UBERON:0003056,4.05e-17,61;UBERON:0001869,5.56e-17,32;UBERON:0002791,7.49e-17,32;UBERON:0000955,3.26e-16,68;UBERON:0006238,3.26e-16,68;UBERON:0002619,2.10e-14,22;UBERON:0001950,9.67e-14,20;UBERON:0010371,1.63e-13,104;UBERON:0000956,5.92e-13,25;UBERON:0000203,5.92e-13,25;UBERON:0010314,3.50e-12,132;UBERON:0004121,3.82e-12,171;UBERON:0000924,3.82e-12,171;UBERON:0006601,3.82e-12,171;UBERON:0007023,8.98e-11,114 | |||
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| ||
|short_description=p2@TBRG1 | |short_description=p2@TBRG1 | ||
}} | }} |
Latest revision as of 11:19, 16 September 2015
Short description: | p2@TBRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_032811, NR_016021, uc001qaj.3, uc001qak.3, uc001qal.3, uc001qam.3, uc009zbf.2, uc009zbg.2_5end |
EntrezGene: | TBRG1 |
HGNC: | 29551 |
UniProt: | Q3YBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.09e-23 | 56 |
neural rod | 5.09e-23 | 56 |
future spinal cord | 5.09e-23 | 56 |
neural keel | 5.09e-23 | 56 |
regional part of forebrain | 9.04e-22 | 41 |
forebrain | 9.04e-22 | 41 |
anterior neural tube | 9.04e-22 | 41 |
future forebrain | 9.04e-22 | 41 |
regional part of nervous system | 2.53e-21 | 53 |
regional part of brain | 2.53e-21 | 53 |
neurectoderm | 7.51e-20 | 86 |
nervous system | 3.52e-19 | 89 |
neural plate | 3.69e-19 | 82 |
presumptive neural plate | 3.69e-19 | 82 |
central nervous system | 5.86e-19 | 81 |
telencephalon | 1.06e-17 | 34 |
brain grey matter | 1.57e-17 | 34 |
gray matter | 1.57e-17 | 34 |
pre-chordal neural plate | 4.05e-17 | 61 |
cerebral hemisphere | 5.56e-17 | 32 |
regional part of telencephalon | 7.49e-17 | 32 |
brain | 3.26e-16 | 68 |
future brain | 3.26e-16 | 68 |
regional part of cerebral cortex | 2.10e-14 | 22 |
neocortex | 9.67e-14 | 20 |
ecto-epithelium | 1.63e-13 | 104 |
cerebral cortex | 5.92e-13 | 25 |
pallium | 5.92e-13 | 25 |
structure with developmental contribution from neural crest | 3.50e-12 | 132 |
ectoderm-derived structure | 3.82e-12 | 171 |
ectoderm | 3.82e-12 | 171 |
presumptive ectoderm | 3.82e-12 | 171 |
adult organism | 8.98e-11 | 114 |