FFCP PHASE1:Hg19::chr11:121418054..121418056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121418054..121418056,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:121418054..121418056,+ | |description=CAGE_peak_at_chr11:121418054..121418056,+ | ||
|id=chr11:121418054..121418056,+ | |id=chr11:121418054..121418056,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.60e-11!52;CL:0000542!1.42e-10!53;CL:0000051!1.42e-10!53;CL:0002087!2.38e-08!119;CL:0000738!5.17e-08!140 | |ontology_enrichment_celltype=CL:0000838!6.60e-11!52;CL:0000542!1.42e-10!53;CL:0000051!1.42e-10!53;CL:0002087!2.38e-08!119;CL:0000738!5.17e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.25e-28;3!CL:0000084;4.38e-09;25!CL:0000791;1.92e-08;18!CL:0000789;1.92e-08;18!CL:0002419;1.92e-08;18!CL:0000542;9.55e-08;53!CL:0000624;3.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.72e-28,3;CL:0000825,2.72e-28,3;CL:0000838,4.93e-13,52;CL:0000542,9.18e-13,53;CL:0000051,9.18e-13,53;CL:0002087,4.11e-11,115;CL:0000738,9.96e-11,136;CL:0000084,4.78e-09,25;CL:0000827,4.78e-09,25;CL:0002031,7.04e-09,120;CL:0000791,1.88e-08,18;CL:0000789,1.88e-08,18;CL:0002420,1.88e-08,18;CL:0002419,1.88e-08,18;CL:0000790,1.88e-08,18;CL:0000037,3.00e-08,168;CL:0000988,1.03e-07,177;CL:0002032,2.28e-07,161;CL:0000837,2.28e-07,161;CL:0000624,4.00e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.50e-10;1!UBERON:0005754;2.50e-10;1!CL:0000790;1.92e-08;18!CL:0000051;9.55e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-22!115;UBERON:0001049!8.23e-21!57;UBERON:0005068!8.23e-21!57;UBERON:0006241!8.23e-21!57;UBERON:0007135!8.23e-21!57;UBERON:0000955!3.47e-17!69;UBERON:0006238!3.47e-17!69;UBERON:0001017!3.55e-17!82;UBERON:0002616!7.84e-17!59;UBERON:0002780!5.31e-16!41;UBERON:0001890!5.31e-16!41;UBERON:0006240!5.31e-16!41;UBERON:0005743!7.29e-16!86;UBERON:0003080!1.87e-15!42;UBERON:0000073!2.45e-13!94;UBERON:0001016!2.45e-13!94;UBERON:0003075!3.11e-12!86;UBERON:0007284!3.11e-12!86;UBERON:0002346!2.91e-11!90;UBERON:0002020!5.96e-11!34;UBERON:0003528!5.96e-11!34;UBERON:0001893!9.55e-11!34;UBERON:0002619!3.47e-10!22;UBERON:0002791!5.95e-10!33;UBERON:0003056!1.77e-09!61;UBERON:0001869!3.56e-09!32;UBERON:0000956!1.40e-08!25;UBERON:0000203!1.40e-08!25;UBERON:0001950!4.15e-08!20;UBERON:0001894!8.19e-08!7;UBERON:0006222!8.19e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.50e-10;1!UBERON:0000998;2.50e-10;1!UBERON:0006868;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.89e-10,1;UBERON:0000998,2.50e-10,1;UBERON:0006868,2.50e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0.309632246632152,0,0,0,0.232401601740905,0.142169232487422,0,0,0.601633342410425,1.30206522429511,0,0.32389366601898,0,1.16318591023652,0.377875943688809,1.21292030593908,0,0,0,0,0,0,0,0,0,0.564727018627814,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,0,0,0,0,0,0.590129310341499,2.35806457649499,2.2616164889946,0,0,0,1.94826728407911,0,0.589211814949674,0,0.541607727530031,0.128091319725675,0.520237390239513,1.47994114143309,0.276350017785848,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,1.33720097891754,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,3.45004119775228,2.82354679815446,0,0,0,0,0,0.749007023947182,11.966458368161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.552896299656123,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0.067401132980677,0,0.702793337176017,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0.338693328263138,0.795229689809303,0.408610218334727,0,0.412618309791701,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0.366078794705889,0.500763722825999,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.41023272848151,1.00828678488687,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.202612753855184,0.781078098613847,1.2401207790071,0,0,0,0,0,0.255524855279191,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.135939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.231522474323834,0,0,0.245148321753905,0,0.392616934229891,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.476128862927481,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0.961705476909699 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| ||
|short_description=p@chr11:121418054..121418056,+ | |short_description=p@chr11:121418054..121418056,+ | ||
}} | }} |
Latest revision as of 19:13, 23 July 2015
Short description: | p@chr11:121418054..121418056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121418054..121418056, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.72e-28 | 3 |
pro-NK cell | 2.72e-28 | 3 |
lymphoid lineage restricted progenitor cell | 4.93e-13 | 52 |
lymphocyte | 9.18e-13 | 53 |
common lymphoid progenitor | 9.18e-13 | 53 |
nongranular leukocyte | 4.11e-11 | 115 |
leukocyte | 9.96e-11 | 136 |
T cell | 4.78e-09 | 25 |
pro-T cell | 4.78e-09 | 25 |
hematopoietic lineage restricted progenitor cell | 7.04e-09 | 120 |
mature alpha-beta T cell | 1.88e-08 | 18 |
alpha-beta T cell | 1.88e-08 | 18 |
immature T cell | 1.88e-08 | 18 |
mature T cell | 1.88e-08 | 18 |
immature alpha-beta T cell | 1.88e-08 | 18 |
hematopoietic stem cell | 3.00e-08 | 168 |
hematopoietic cell | 1.03e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-07 | 161 |
CD4-positive, alpha-beta T cell | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.89e-10 | 1 |
seminal vesicle | 2.50e-10 | 1 |
seminal fluid secreting gland | 2.50e-10 | 1 |