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FFCP PHASE1:Mm9::chr12:91050907..91050928,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100505240,18191
|EntrezGene=100505240,18191
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=Q8C985,E9Q3Q4
|UniProt=Q8C985,E9Q3Q4
|association_with_transcript=0bp_to_ENSMUST00000110130,ENSMUST00000110133,ENSMUST00000170784,uc007oke.1_5end
|association_with_transcript=0bp_to_ENSMUST00000110130,ENSMUST00000110133,ENSMUST00000170784,uc007oke.1_5end
|cluster_id=chr12:91050907..91050928,+
|description=CAGE_peak_2_at_LOC100505240_5end,CAGE_peak_3_at_Nrxn3_5end
|description=CAGE_peak_2_at_LOC100505240_5end,CAGE_peak_3_at_Nrxn3_5end
|id=chr12:91050907..91050928,+
|id=chr12:91050907..91050928,+
|ontology_enrichment_celltype=CL:0000540!2.10e-13!33;CL:0000047!2.10e-13!33;CL:0000031!2.10e-13!33;CL:0000404!2.10e-13!33;CL:0000117!1.09e-10!23;CL:0000337!1.09e-10!23;CL:0000393!2.80e-09!39;CL:0000211!2.80e-09!39;CL:0000221!6.36e-09!44;CL:0000133!6.36e-09!44;CL:0002319!1.20e-08!43
|ontology_enrichment_celltype=CL:0000540!2.10e-13!33;CL:0000047!2.10e-13!33;CL:0000031!2.10e-13!33;CL:0000404!2.10e-13!33;CL:0000117!1.09e-10!23;CL:0000337!1.09e-10!23;CL:0000393!2.80e-09!39;CL:0000211!2.80e-09!39;CL:0000221!6.36e-09!44;CL:0000133!6.36e-09!44;CL:0002319!1.20e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.36e-14,33;CL:0000047,1.36e-14,33;CL:0000031,1.36e-14,33;CL:0000404,1.36e-14,33;CL:0000117,4.41e-13,23;CL:0000337,4.41e-13,23;CL:0000393,5.67e-11,39;CL:0000211,5.67e-11,39;CL:0000221,1.60e-09,44;CL:0000133,1.60e-09,44;CL:0002319,3.63e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.58e-26!73;UBERON:0005743!9.58e-26!73;UBERON:0000073!2.00e-25!75;UBERON:0001016!2.00e-25!75;UBERON:0004121!6.64e-21!102;UBERON:0000924!6.64e-21!102;UBERON:0006601!6.64e-21!102;UBERON:0001049!2.61e-20!52;UBERON:0005068!2.61e-20!52;UBERON:0006241!2.61e-20!52;UBERON:0007135!2.61e-20!52;UBERON:0000033!2.69e-20!63;UBERON:0000955!5.21e-19!50;UBERON:0006238!5.21e-19!50;UBERON:0002346!8.21e-19!71;UBERON:0003075!8.21e-19!71;UBERON:0007284!8.21e-19!71;UBERON:0002616!2.86e-18!49;UBERON:0003056!1.02e-15!49;UBERON:0003080!1.45e-14!40;UBERON:0002020!1.92e-14!34;UBERON:0002780!7.36e-14!39;UBERON:0001890!7.36e-14!39;UBERON:0006240!7.36e-14!39;UBERON:0002791!4.70e-11!29;UBERON:0003528!4.70e-11!29;UBERON:0001893!4.70e-11!29;UBERON:0000153!6.35e-11!94;UBERON:0007811!2.16e-10!86;UBERON:0002619!1.13e-07!17;UBERON:0002021!1.21e-07!10;UBERON:0000411!1.21e-07!10;UBERON:0001950!1.21e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.44e-31,73;UBERON:0001016,1.03e-29,75;UBERON:0000073,6.42e-27,54;UBERON:0002346,2.18e-26,64;UBERON:0003075,2.18e-26,64;UBERON:0007284,2.18e-26,64;UBERON:0004121,5.83e-25,95;UBERON:0000924,5.83e-25,95;UBERON:0006601,5.83e-25,95;UBERON:0001049,8.84e-25,52;UBERON:0005068,8.84e-25,52;UBERON:0006241,8.84e-25,52;UBERON:0007135,8.84e-25,52;UBERON:0010371,5.68e-23,73;UBERON:0000955,5.47e-20,47;UBERON:0006238,5.47e-20,47;UBERON:0002616,4.83e-19,46;UBERON:0002020,1.22e-16,34;UBERON:0003080,1.51e-16,40;UBERON:0003056,2.61e-16,49;UBERON:0002780,1.25e-15,39;UBERON:0001890,1.25e-15,39;UBERON:0006240,1.25e-15,39;UBERON:0010314,1.15e-14,92;UBERON:0003528,3.28e-12,29;UBERON:0002791,3.28e-12,29;UBERON:0001893,3.28e-12,29;UBERON:0002021,6.63e-10,10;UBERON:0000411,6.63e-10,10;UBERON:0001950,6.63e-10,10;UBERON:0003076,4.75e-09,12;UBERON:0003057,4.75e-09,12;UBERON:0002420,6.46e-08,8;UBERON:0007245,6.46e-08,8;UBERON:0010009,6.46e-08,8;UBERON:0010011,6.46e-08,8;UBERON:0000454,6.46e-08,8;UBERON:0002619,1.64e-07,17;UBERON:0002240,2.40e-07,6;UBERON:0005174,2.40e-07,6;UBERON:0001137,2.40e-07,6
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,5.46254444320914,11.1088105647127,10.1413024560989,0,0,0,0,0,0,0,0,0.135005938331691,0,13.139945282575,16.7860091123226,1.10241719293459,0.862609239164127,1.83843757322004,34.1359231098105,33.5817699164044,26.4203237200739,4.2203612073662,4.20843160571084,5.73004707612436,27.6391169011367,6.19038871034848,11.6126668310376,27.9897156199984,19.2201769078789,9.31997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,123.260715541861,100.743865977272,0,0,0,0,19.472783122627,10.5225138648284,5.15182843662744,15.8180131374972,10.7400492078739,24.5189892580281,18.0087802005211,0.407357455401265,0,0,1.68353484709179,0.780722657776222,0.229902104433473,0,0.452114453507145,1.02054748726992,2.0498195245576,1.78033276663485,1.55222022443409,0,0.945530400839096,2.11141348996739,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,2.94405927989778,0.92614151141356,0,0,1.91959425481711,1.16118335930219,0.257734922644187,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0,0,0,0,0,0.199141273254367,2.46568271239006,1.25673363870702,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,27.9358026578758,19.1055049145291,0,0,1.89304931649754,2.34263246577983,2.58508077279359,0.238968797952552,0.445597348164788,0.283076530788832,3.23848561339915,2.33804686329049,1.58115111178609,19.2792789853084,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,2.45781499187234,3.42939256050548,3.54680467284547,1.60531935841864,1.15184314421485,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.361877549568935,0.358117032009409,0,0,28.740921811629,0,0,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,1.21991680276109,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.904118764344118,1.01373675294467,0.938857909166032,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,7.90652579663893,6.90487854760765,6.87474616127276,9.28007184655913,8.90607275701835,9.82012066606611,10.1253375034771,11.7083512838297,11.7817026335893,12.9440077937955,0.93408612825759,2.39414924040619,4.95127456686989,0.972426868273176,1.46729213839588,1.2869045591501,1.33348036680969,1.64828045791115,1.92551525755089,1.26348605881899,4.05566879824384,1.88626341386076,1.21733959710847,1.53660365771686,1.89537047553524,1.90517476513229,1.15884325944855,1.35036454324594,0.412085900803307,1.91358596174717,1.37147700954166,1.95223386775271,1.43061713968393,2.32554266611726,0.846984423737976,1.86152137361688,2.0122077016005,2.89376682581627,1.49384525230448,2.80571135828869,2.01679530811096,1.0835493061312,1.63692417267876,1.85924209423159,2.3148793317737,4.24677982494508,1.40358965067245,1.93383948643468,0.765153328275374,0.220591419119515,0.695603506861264
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,5.46254444320914,11.1088105647127,10.1413024560989,0,0,0,0,0,0,0,0,0.135005938331691,0,13.139945282575,16.7860091123226,1.10241719293459,0.862609239164127,1.83843757322004,34.1359231098105,33.5817699164044,26.4203237200739,4.2203612073662,4.20843160571084,5.73004707612436,27.6391169011367,6.19038871034848,11.6126668310376,27.9897156199984,19.2201769078789,9.31997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,1.40843419776681,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,123.260715541861,100.743865977272,0,0,0,0,19.472783122627,10.5225138648284,5.15182843662744,15.8180131374972,10.7400492078739,24.5189892580281,18.0087802005211,0.407357455401265,0,0,1.68353484709179,0.780722657776222,0.229902104433473,0,0.452114453507145,1.02054748726992,2.0498195245576,1.78033276663485,1.55222022443409,0,0.945530400839096,2.11141348996739,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,2.94405927989778,0.92614151141356,0,0,1.91959425481711,1.16118335930219,0.257734922644187,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0,0,0,0,0,0.199141273254367,2.46568271239006,1.25673363870702,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,27.9358026578758,19.1055049145291,0,0,1.89304931649754,2.34263246577983,2.58508077279359,0.238968797952552,0.445597348164788,0.283076530788832,3.23848561339915,2.33804686329049,1.58115111178609,19.2792789853084,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,2.45781499187234,3.42939256050548,3.54680467284547,1.60531935841864,1.15184314421485,0.304464949114599,0,0,0.441056796109924,0.16488625294148,0.161464426695906,0.361877549568935,0.358117032009409,0,0,28.740921811629,0,0,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,1.21991680276109,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.904118764344118,1.01373675294467,0.938857909166032,0,0,0,0,0,0,0.205421914329655,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,7.90652579663893,6.90487854760765,6.87474616127276,9.28007184655913,8.90607275701835,9.82012066606611,10.1253375034771,11.7083512838297,11.7817026335893,12.9440077937955,0.93408612825759,2.39414924040619,4.95127456686989,0.972426868273176,1.46729213839588,1.2869045591501,1.33348036680969,1.64828045791115,1.92551525755089,1.26348605881899,4.05566879824384,1.88626341386076,1.21733959710847,1.53660365771686,1.89537047553524,1.90517476513229,1.15884325944855,1.35036454324594,0.412085900803307,1.91358596174717,1.37147700954166,1.95223386775271,1.43061713968393,2.32554266611726,0.846984423737976,1.86152137361688,2.0122077016005,2.89376682581627,1.49384525230448,2.80571135828869,2.01679530811096,1.0835493061312,1.63692417267876,1.85924209423159,2.3148793317737,4.24677982494508,1.40358965067245,1.93383948643468,0.765153328275374,0.220591419119515,0.695603506861264
|short_description=p2@LOC100505240,p3@Nrxn3
|short_description=p2@LOC100505240,p3@Nrxn3
}}
}}

Latest revision as of 23:56, 26 September 2015

Short description:p2@LOC100505240, p3@Nrxn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_LOC100505240_5end, CAGE_peak_3_at_Nrxn3_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: 0bp_to_ENSMUST00000110130, ENSMUST00000110133, ENSMUST00000170784, uc007oke.1_5end
EntrezGene:100505240,18191
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@LOC100505240p3@Nrxn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.99
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2123.26
cerebellum, neonate N30.CNhs11135.1395-42I2100.74
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.47
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B218.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.94
medulla oblongata, neonate N30.CNhs11200.1396-42A319.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C928.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.36e-1433
neuronal stem cell1.36e-1433
neuroblast1.36e-1433
electrically signaling cell1.36e-1433
CNS neuron (sensu Vertebrata)4.41e-1323
neuroblast (sensu Vertebrata)4.41e-1323
electrically responsive cell5.67e-1139
electrically active cell5.67e-1139
ectodermal cell1.60e-0944
neurectodermal cell1.60e-0944
neural cell3.63e-0943

Uber anatomy
Ontology termp-valuen
central nervous system4.44e-3173
nervous system1.03e-2975
regional part of nervous system6.42e-2754
neurectoderm2.18e-2664
neural plate2.18e-2664
presumptive neural plate2.18e-2664
ectoderm-derived structure5.83e-2595
ectoderm5.83e-2595
presumptive ectoderm5.83e-2595
neural tube8.84e-2552
neural rod8.84e-2552
future spinal cord8.84e-2552
neural keel8.84e-2552
ecto-epithelium5.68e-2373
brain5.47e-2047
future brain5.47e-2047
regional part of brain4.83e-1946
gray matter1.22e-1634
anterior neural tube1.51e-1640
pre-chordal neural plate2.61e-1649
regional part of forebrain1.25e-1539
forebrain1.25e-1539
future forebrain1.25e-1539
structure with developmental contribution from neural crest1.15e-1492
brain grey matter3.28e-1229
regional part of telencephalon3.28e-1229
telencephalon3.28e-1229
occipital lobe6.63e-1010
visual cortex6.63e-1010
neocortex6.63e-1010
posterior neural tube4.75e-0912
chordal neural plate4.75e-0912
basal ganglion6.46e-088
nuclear complex of neuraxis6.46e-088
aggregate regional part of brain6.46e-088
collection of basal ganglia6.46e-088
cerebral subcortex6.46e-088
regional part of cerebral cortex1.64e-0717
spinal cord2.40e-076
dorsal region element2.40e-076
dorsum2.40e-076
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