FFCP PHASE1:Mm9::chr12:89961310..89961337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100505240,18191 | |EntrezGene=100505240,18191 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=538 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P9K9,Q3UEY9 | |UniProt=Q6P9K9,Q3UEY9 | ||
|association_with_transcript=0bp_to_ENSMUST00000110138,ENSMUST00000167734,NM_001198587,uc007ojy.1,uc007ojz.1,uc007oka.1,uc011ypu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000110138,ENSMUST00000167734,NM_001198587,uc007ojy.1,uc007ojz.1,uc007oka.1,uc011ypu.1_5end | ||
|cluster_id=chr12:89961310..89961337,+ | |||
|description=CAGE_peak_1_at_LOC100505240_5end,CAGE_peak_1_at_Nrxn3_5end | |description=CAGE_peak_1_at_LOC100505240_5end,CAGE_peak_1_at_Nrxn3_5end | ||
|id=chr12:89961310..89961337,+ | |id=chr12:89961310..89961337,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.77e-13!33;CL:0000047!3.77e-13!33;CL:0000031!3.77e-13!33;CL:0000404!3.77e-13!33;CL:0000117!7.98e-12!23;CL:0000337!7.98e-12!23;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0002319!3.91e-11!43;CL:0000393!7.15e-09!39;CL:0000211!7.15e-09!39;CL:0000055!6.15e-08!50 | |ontology_enrichment_celltype=CL:0000540!3.77e-13!33;CL:0000047!3.77e-13!33;CL:0000031!3.77e-13!33;CL:0000404!3.77e-13!33;CL:0000117!7.98e-12!23;CL:0000337!7.98e-12!23;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0002319!3.91e-11!43;CL:0000393!7.15e-09!39;CL:0000211!7.15e-09!39;CL:0000055!6.15e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-13,33;CL:0000047,1.76e-13,33;CL:0000031,1.76e-13,33;CL:0000404,1.76e-13,33;CL:0000117,4.08e-12,23;CL:0000337,4.08e-12,23;CL:0000221,1.54e-11,44;CL:0000133,1.54e-11,44;CL:0002319,3.26e-11,43;CL:0000393,6.22e-09,39;CL:0000211,6.22e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-27!73;UBERON:0005743!1.67e-27!73;UBERON:0000073!6.97e-27!75;UBERON:0001016!6.97e-27!75;UBERON:0000033!1.57e-23!63;UBERON:0004121!2.85e-22!102;UBERON:0000924!2.85e-22!102;UBERON:0006601!2.85e-22!102;UBERON:0002346!3.48e-22!71;UBERON:0003075!3.48e-22!71;UBERON:0007284!3.48e-22!71;UBERON:0001049!1.21e-21!52;UBERON:0005068!1.21e-21!52;UBERON:0006241!1.21e-21!52;UBERON:0007135!1.21e-21!52;UBERON:0000955!8.80e-21!50;UBERON:0006238!8.80e-21!50;UBERON:0002616!4.92e-20!49;UBERON:0003056!8.56e-20!49;UBERON:0002020!3.93e-17!34;UBERON:0003080!2.74e-16!40;UBERON:0002780!9.45e-16!39;UBERON:0001890!9.45e-16!39;UBERON:0006240!9.45e-16!39;UBERON:0002791!1.37e-14!29;UBERON:0003528!1.37e-14!29;UBERON:0001893!1.37e-14!29;UBERON:0000025!1.05e-10!114;UBERON:0000956!1.15e-10!21;UBERON:0001869!1.15e-10!21;UBERON:0000203!1.15e-10!21;UBERON:0007811!5.96e-10!86;UBERON:0004111!7.51e-10!122;UBERON:0000468!1.60e-09!333;UBERON:0002619!3.27e-09!17;UBERON:0002021!3.64e-08!10;UBERON:0000411!3.64e-08!10;UBERON:0001950!3.64e-08!10;UBERON:0000153!4.59e-08!94;UBERON:0000922!4.23e-07!328;UBERON:0000479!8.64e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.47e-28,73;UBERON:0001016,2.34e-27,75;UBERON:0002346,1.10e-26,64;UBERON:0003075,1.10e-26,64;UBERON:0007284,1.10e-26,64;UBERON:0004121,2.38e-25,95;UBERON:0000924,2.38e-25,95;UBERON:0006601,2.38e-25,95;UBERON:0000073,4.20e-23,54;UBERON:0010371,3.96e-22,73;UBERON:0001049,5.88e-22,52;UBERON:0005068,5.88e-22,52;UBERON:0006241,5.88e-22,52;UBERON:0007135,5.88e-22,52;UBERON:0003056,4.62e-20,49;UBERON:0000955,1.98e-19,47;UBERON:0006238,1.98e-19,47;UBERON:0002616,1.12e-18,46;UBERON:0002020,2.65e-17,34;UBERON:0010314,4.63e-17,92;UBERON:0003080,1.84e-16,40;UBERON:0002780,6.56e-16,39;UBERON:0001890,6.56e-16,39;UBERON:0006240,6.56e-16,39;UBERON:0003528,1.08e-14,29;UBERON:0002791,1.08e-14,29;UBERON:0001893,1.08e-14,29;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0000025,1.10e-09,114;UBERON:0002619,3.64e-09,17;UBERON:0004111,1.27e-08,122;UBERON:0002021,2.36e-08,10;UBERON:0000411,2.36e-08,10;UBERON:0001950,2.36e-08,10 | |||
|phase1_expression=91.4449916968373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.6447619664119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,10.247182349881,0.439372365468944,1.36100929351998,2.51975558925653,2.87505128729943,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,111.071737011919,137.008663631457,82.3980824558033,1.69422266034566,2.66788438833342,0,1.97773272513395,0,13.1824048628098,30.7374644257244,49.8747035203778,49.8171912443939,37.0171931978432,70.8414441321433,71.7822758092744,221.585855779852,268.654855264117,186.601413681834,98.0031340894559,87.4658265883536,107.063753679602,115.92804691484,88.7430142943374,91.6807532179897,67.5622857583342,52.3369227329462,82.8166502950311,135.234520732413,134.541238355152,96.5549129375057,2.72614295999463,3.09843396437821,3.47837386442013,9.46466264679525,0,0.539703191637817,1.29955283489534,0,4.77511028447956,0,0,0,48.3092929834014,0,0,0,0,0,0,2.51204535381932,0.517875767294343,0,2.4287945747259,0.913396434936424,1.38369298353635,1.3565037649736,8.34879820663504,0,10.1349936771093,1.15679485535929,0,1.61766849947409,0,0,1.86391761218122,161.029438356351,131.323085172036,0,0,0,0,110.845073159569,312.930412327941,201.423926436922,408.660976772042,312.995719772325,149.815180127443,207.831057989798,24.8488047794772,0.124406970610093,0.505445516867349,102.274741960826,4.68433594665733,12.1848115349741,32.9513697543789,83.4904690809861,130.289895874793,171.544271461414,142.895129953586,347.956033643976,0,0.567318240503458,1.05570674498369,1.7535658594206,2.22437799380478,0.348252166522167,2.05782136407943,10.3497818745616,0,0,0,8.07790512888457,4.92504725960302,2.88099298337624,7.81257627431194,4.13204886669548,3.08534225774756,3.25547522650571,5.90201483079162,4.32031766758527,1.81015834904829,2.29834449710733,0.972825714550269,1.31579988682799,1.3173006917463,0.805238512562231,266.857944727877,95.2896710632174,0,0.264450566663544,15.1434657880016,16.2565670302307,14.4331556680745,4.84040459096022,6.22658522765637,4.37518940058886,0.949058123089023,1.97638745668813,2.5133520880027,3.97912944082302,3.11942539390592,4.49409704327111,0.648414149624083,1.39398891278057,3.41402221715547,8.68288695833939,22.5415471346161,26.8819752755815,22.6924409986122,20.4095235880827,7.3986748435381,3.39503340353085,4.70996183524124,2.46794327843601,1.1858105083486,8.17541018008861,6.87956482896211,5.17182858485164,5.07150303471257,4.10001171579109,4.32863948028414,4.02774592431135,10.8630601939274,2.47105271869273,0,14.1413560114031,12.1694692514679,8.84026072814891,6.09951205974501,3.85954817090694,1.84753190166605,1.70542270593436,6.84452901056509,6.28056817368196,11.2651319178481,35.1763140627813,37.1348079782181,15.0252908850505,25.6945284893091,19.9318220683897,13.2347457985714,0.983179888294428,0.863424909329478,1.73578870297814,0,0,0,0,111.101008271552,100.56762709611,0,0.757412781613119,20.1925260426404,24.2072021463916,60.1031279674509,3.34556317133573,7.79795359288379,10.7569081699756,26.717506310543,41.5003318234063,54.1544255786737,1068.07205578609,1.84522110770749,5.34196811001766,8.79589580509311,0.494910368917606,0,8.49732226542435,4.83717691143602,2.07465587731488,4.13422650033082,6.14870295887855,2.58428293168221,3.99887102425256,5.70395805415554,1.58018378967908,0,0,25.1925308257803,9.36317688962813,5.30370603509293,4.07240366560025,15.7832807941623,28.1822731811271,23.5305099461033,13.0919928119278,1.40803024838226,2.75381692122966,1.98475558249466,0,2.9063596805263,1.20625849856312,0.596861720015682,0.656563598980245,3.49777003955821,89.0041449650446,0,2.06386867963222,0.740778109478847,0.188368457004691,0,0,0,0,0,0,9.17374381385292,8.53941761932765,6.37231510848627,9.61806161666556,11.7915784422936,6.20375993370175,7.02554373665355,0.26175594198403,0.518459893167171,0,0,16.5963366108816,14.3948886697675,8.75030347548214,8.78286799648571,10.644235905919,8.33236394384853,4.9477666240701,8.17902886520545,2.41584120826006,1.44015003128933,0.316011120628178,1.01362607645082,1.84879722896689,0.909445760844565,0.895133478337407,0.993406773906324,0.360586348559907,0.443068581523732,0.201932899896295,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,1.54551675225752,21.3958022014347,0.36630324853453,0.428736758158132,0.501572104035363,407.750830369522,406.927509072344,414.203456216684,325.489927358944,372.684890755229,379.963130387019,322.660755110803,385.474949959933,443.626418395536,404.888563789923,4.15149390336707,78.6079000600031,64.878770186571,51.7817307355466,15.5113740344707,16.7297592689513,53.3392146723877,50.0665189090513,64.5047611279549,57.6149642821458,61.8489491732185,56.7765287572089,49.9109234814473,54.6134550013535,49.2796323639162,43.3427259067597,38.1259432358575,38.1960256518136,52.7469953028232,44.3068749604536,48.0016953339582,45.2563305706311,39.341971341308,45.9294676558158,46.5841433055887,45.522659045722,43.3539295708471,51.0355240189415,42.7782958614465,49.380519905881,40.8104462347159,38.1212346793431,33.9661765830842,43.5372523732564,48.0337461343042,57.4564329257276,38.8326470019378,44.0485660799011,12.242453252406,5.29419405886837,2.08681052058379 | |phase1_expression=91.4449916968373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.6447619664119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,10.247182349881,0.439372365468944,1.36100929351998,2.51975558925653,2.87505128729943,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,111.071737011919,137.008663631457,82.3980824558033,1.69422266034566,2.66788438833342,0,1.97773272513395,0,13.1824048628098,30.7374644257244,49.8747035203778,49.8171912443939,37.0171931978432,70.8414441321433,71.7822758092744,221.585855779852,268.654855264117,186.601413681834,98.0031340894559,87.4658265883536,107.063753679602,115.92804691484,88.7430142943374,91.6807532179897,67.5622857583342,52.3369227329462,82.8166502950311,135.234520732413,134.541238355152,96.5549129375057,2.72614295999463,3.09843396437821,3.47837386442013,9.46466264679525,0,0.539703191637817,1.29955283489534,0,4.77511028447956,0,0,0,48.3092929834014,0,0,0,0,0,0,2.51204535381932,0.517875767294343,0,2.4287945747259,0.913396434936424,1.38369298353635,1.3565037649736,8.34879820663504,0,10.1349936771093,1.15679485535929,0,1.61766849947409,0,0,1.86391761218122,161.029438356351,131.323085172036,0,0,0,0,110.845073159569,312.930412327941,201.423926436922,408.660976772042,312.995719772325,149.815180127443,207.831057989798,24.8488047794772,0.124406970610093,0.505445516867349,102.274741960826,4.68433594665733,12.1848115349741,32.9513697543789,83.4904690809861,130.289895874793,171.544271461414,142.895129953586,347.956033643976,0,0.567318240503458,1.05570674498369,1.7535658594206,2.22437799380478,0.348252166522167,2.05782136407943,10.3497818745616,0,0,0,8.07790512888457,4.92504725960302,2.88099298337624,7.81257627431194,4.13204886669548,3.08534225774756,3.25547522650571,5.90201483079162,4.32031766758527,1.81015834904829,2.29834449710733,0.972825714550269,1.31579988682799,1.3173006917463,0.805238512562231,266.857944727877,95.2896710632174,0,0.264450566663544,15.1434657880016,16.2565670302307,14.4331556680745,4.84040459096022,6.22658522765637,4.37518940058886,0.949058123089023,1.97638745668813,2.5133520880027,3.97912944082302,3.11942539390592,4.49409704327111,0.648414149624083,1.39398891278057,3.41402221715547,8.68288695833939,22.5415471346161,26.8819752755815,22.6924409986122,20.4095235880827,7.3986748435381,3.39503340353085,4.70996183524124,2.46794327843601,1.1858105083486,8.17541018008861,6.87956482896211,5.17182858485164,5.07150303471257,4.10001171579109,4.32863948028414,4.02774592431135,10.8630601939274,2.47105271869273,0,14.1413560114031,12.1694692514679,8.84026072814891,6.09951205974501,3.85954817090694,1.84753190166605,1.70542270593436,6.84452901056509,6.28056817368196,11.2651319178481,35.1763140627813,37.1348079782181,15.0252908850505,25.6945284893091,19.9318220683897,13.2347457985714,0.983179888294428,0.863424909329478,1.73578870297814,0,0,0,0,111.101008271552,100.56762709611,0,0.757412781613119,20.1925260426404,24.2072021463916,60.1031279674509,3.34556317133573,7.79795359288379,10.7569081699756,26.717506310543,41.5003318234063,54.1544255786737,1068.07205578609,1.84522110770749,5.34196811001766,8.79589580509311,0.494910368917606,0,8.49732226542435,4.83717691143602,2.07465587731488,4.13422650033082,6.14870295887855,2.58428293168221,3.99887102425256,5.70395805415554,1.58018378967908,0,0,25.1925308257803,9.36317688962813,5.30370603509293,4.07240366560025,15.7832807941623,28.1822731811271,23.5305099461033,13.0919928119278,1.40803024838226,2.75381692122966,1.98475558249466,0,2.9063596805263,1.20625849856312,0.596861720015682,0.656563598980245,3.49777003955821,89.0041449650446,0,2.06386867963222,0.740778109478847,0.188368457004691,0,0,0,0,0,0,9.17374381385292,8.53941761932765,6.37231510848627,9.61806161666556,11.7915784422936,6.20375993370175,7.02554373665355,0.26175594198403,0.518459893167171,0,0,16.5963366108816,14.3948886697675,8.75030347548214,8.78286799648571,10.644235905919,8.33236394384853,4.9477666240701,8.17902886520545,2.41584120826006,1.44015003128933,0.316011120628178,1.01362607645082,1.84879722896689,0.909445760844565,0.895133478337407,0.993406773906324,0.360586348559907,0.443068581523732,0.201932899896295,0.304827226619999,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,1.54551675225752,21.3958022014347,0.36630324853453,0.428736758158132,0.501572104035363,407.750830369522,406.927509072344,414.203456216684,325.489927358944,372.684890755229,379.963130387019,322.660755110803,385.474949959933,443.626418395536,404.888563789923,4.15149390336707,78.6079000600031,64.878770186571,51.7817307355466,15.5113740344707,16.7297592689513,53.3392146723877,50.0665189090513,64.5047611279549,57.6149642821458,61.8489491732185,56.7765287572089,49.9109234814473,54.6134550013535,49.2796323639162,43.3427259067597,38.1259432358575,38.1960256518136,52.7469953028232,44.3068749604536,48.0016953339582,45.2563305706311,39.341971341308,45.9294676558158,46.5841433055887,45.522659045722,43.3539295708471,51.0355240189415,42.7782958614465,49.380519905881,40.8104462347159,38.1212346793431,33.9661765830842,43.5372523732564,48.0337461343042,57.4564329257276,38.8326470019378,44.0485660799011,12.242453252406,5.29419405886837,2.08681052058379 | ||
|short_description=p1@LOC100505240,p1@Nrxn3 | |short_description=p1@LOC100505240,p1@Nrxn3 | ||
}} | }} |
Latest revision as of 23:46, 26 September 2015
Short description: | p1@LOC100505240, p1@Nrxn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100505240_5end, CAGE_peak_1_at_Nrxn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:538 |
Association with transcript: | 0bp_to_ENSMUST00000110138, ENSMUST00000167734, NM_001198587, uc007ojy.1, uc007ojz.1, uc007oka.1, uc011ypu.1_5end |
EntrezGene: | 100505240,18191 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.76e-13 | 33 |
neuronal stem cell | 1.76e-13 | 33 |
neuroblast | 1.76e-13 | 33 |
electrically signaling cell | 1.76e-13 | 33 |
CNS neuron (sensu Vertebrata) | 4.08e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.08e-12 | 23 |
ectodermal cell | 1.54e-11 | 44 |
neurectodermal cell | 1.54e-11 | 44 |
neural cell | 3.26e-11 | 43 |
electrically responsive cell | 6.22e-09 | 39 |
electrically active cell | 6.22e-09 | 39 |