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FFCP PHASE1:Mm9::chr17:26206420..26206495,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=215445
|EntrezGene=215445
|HGNC=
|HGNC=
|MCL_coexpression_id=2943
|TSSclassifier=NA
|UniProt=Q8CHD8
|UniProt=Q8CHD8
|association_with_transcript=-66bp_to_ENSMUST00000120691_5end
|association_with_transcript=-66bp_to_ENSMUST00000120691_5end
|cluster_id=chr17:26206420..26206495,-
|description=CAGE_peak_1_at_Rab11fip3_5end
|description=CAGE_peak_1_at_Rab11fip3_5end
|id=chr17:26206420..26206495,-
|id=chr17:26206420..26206495,-
|ontology_enrichment_celltype=CL:0000540!2.07e-12!33;CL:0000047!2.07e-12!33;CL:0000031!2.07e-12!33;CL:0000404!2.07e-12!33;CL:0000221!1.78e-11!44;CL:0000133!1.78e-11!44;CL:0000393!2.45e-11!39;CL:0000211!2.45e-11!39;CL:0002319!2.94e-11!43;CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23;CL:0000055!3.81e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.07e-12,33;CL:0000047,2.07e-12,33;CL:0000031,2.07e-12,33;CL:0000404,2.07e-12,33;CL:0000221,1.78e-11,44;CL:0000133,1.78e-11,44;CL:0000393,2.45e-11,39;CL:0000211,2.45e-11,39;CL:0002319,2.94e-11,43;CL:0000117,2.09e-10,23;CL:0000337,2.09e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.32e-31!73;UBERON:0005743!9.32e-31!73;UBERON:0000033!1.48e-29!63;UBERON:0000073!4.70e-29!75;UBERON:0001016!4.70e-29!75;UBERON:0004121!1.63e-28!102;UBERON:0000924!1.63e-28!102;UBERON:0006601!1.63e-28!102;UBERON:0000955!9.65e-25!50;UBERON:0006238!9.65e-25!50;UBERON:0001049!2.79e-24!52;UBERON:0005068!2.79e-24!52;UBERON:0006241!2.79e-24!52;UBERON:0007135!2.79e-24!52;UBERON:0002616!5.62e-24!49;UBERON:0002346!9.71e-23!71;UBERON:0003075!9.71e-23!71;UBERON:0007284!9.71e-23!71;UBERON:0003056!7.17e-22!49;UBERON:0003080!1.75e-19!40;UBERON:0002780!8.44e-19!39;UBERON:0001890!8.44e-19!39;UBERON:0006240!8.44e-19!39;UBERON:0000153!1.24e-17!94;UBERON:0002020!9.01e-17!34;UBERON:0007811!1.57e-16!86;UBERON:0002791!1.25e-15!29;UBERON:0003528!1.25e-15!29;UBERON:0001893!1.25e-15!29;UBERON:0004111!5.18e-13!122;UBERON:0000956!8.17e-12!21;UBERON:0001869!8.17e-12!21;UBERON:0000203!8.17e-12!21;UBERON:0000025!1.14e-10!114;UBERON:0002619!9.42e-10!17;UBERON:0000468!6.61e-09!333;UBERON:0002021!2.08e-07!10;UBERON:0000411!2.08e-07!10;UBERON:0001950!2.08e-07!10;UBERON:0000475!3.15e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.42e-32,95;UBERON:0000924,1.42e-32,95;UBERON:0006601,1.42e-32,95;UBERON:0001017,9.31e-31,73;UBERON:0001016,4.69e-29,75;UBERON:0002346,1.92e-27,64;UBERON:0003075,1.92e-27,64;UBERON:0007284,1.92e-27,64;UBERON:0010371,3.73e-26,73;UBERON:0000073,2.32e-25,54;UBERON:0001049,2.79e-24,52;UBERON:0005068,2.79e-24,52;UBERON:0006241,2.79e-24,52;UBERON:0007135,2.79e-24,52;UBERON:0000955,5.23e-23,47;UBERON:0006238,5.23e-23,47;UBERON:0002616,2.96e-22,46;UBERON:0003056,7.17e-22,49;UBERON:0010314,7.71e-22,92;UBERON:0003080,1.75e-19,40;UBERON:0002780,8.44e-19,39;UBERON:0001890,8.44e-19,39;UBERON:0006240,8.44e-19,39;UBERON:0002020,9.00e-17,34;UBERON:0003528,1.25e-15,29;UBERON:0002791,1.25e-15,29;UBERON:0001893,1.25e-15,29;UBERON:0004111,5.18e-13,122;UBERON:0000956,8.17e-12,21;UBERON:0001869,8.17e-12,21;UBERON:0000203,8.17e-12,21;UBERON:0000025,1.14e-10,114;UBERON:0002619,9.42e-10,17;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10
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69210816,11.2907679847813,15.7221045897248,18.071822415566,18.7623344496513,18.3229159388821,14.7761069552644,63.9979492479533,15.2197093444731,13.4564891439581,13.2366792365678,15.5560950675238,11.1077448190849,14.8681390431885,12.9092962510329,18.0984094933091,27.0537108618334,19.8098979077325,27.938910607013,9.16432249821717,11.149886840959,10.4765176308124,4.67714962720062,10.5625750443814,6.95384741734427,6.49055427407832,10.0428878478713,8.07731599585181,6.09654453239999,8.36857336635776,11.5974878080305,9.1401249558313,11.103305707249,48.7470324772704,6.88156455459601,11.6628013592318,10.2409615982088,27.0465431645067,16.516057839704,18.3151624267265,25.5098371104088,33.103758866334,48.0039066224507,43.2705722316746,44.6858500482729,59.2893479085722,47.2706938641743,53.6329667146687,56.7018900194717,56.2901504030276,60.7210828038834,65.7555595924811,24.9089634202024,30.3258903784784,25.0978400458577,24.0675649897611,22.4286084011941,24.8188736407519,23.3359064191696,21.8397160673228,24.0689407193861,24.2589323293246,21.5457404906704,25.2759297457342,19.7583580761452,24.4576082186601,24.0080260234463,22.3858034903045,24.2198241224748,22.3774695737898,19.3680373377554,21.7854401798908,19.8864166383541,18.8124354528898,21.6976932852062,21.6566160782169,20.8922824522034,22.2536418755109,19.7562210702594,21.5717163379031,23.0866993537965,19.6399795080208,20.5238581354821,24.7246250762664,15.1415485972785,22.930652495523,26.6211123153975,34.4738597554365,26.2003401458857,23.8506869993611,24.2936181727431,24.4856475222662,26.2010654251076
|phase1_expression=36.3537882927882,7.67745896806594,14.1049764210756,8.16653370528441,6.51164448930251,11.0800319461847,13.315920513945,8.00564605337773,41.2510955904384,26.9174205270293,31.1616702170419,21.6980272467315,7.01922992717943,6.20684857174882,2.33176833270964,1.41732687172878,0.699561878128147,3.47008381894061,4.52477630898938,3.81950686618227,24.6625541438102,5.26242041364692,3.6567970479451,5.27974995218242,5.04700418347774,15.5042630311055,6.8921919385452,9.26526300549323,2.47030445293286,3.02436155711917,5.76499327703792,9.52546010189447,4.92051830067656,15.8481681015439,5.19932915552294,7.14808975041517,6.94175811292055,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0,1.45653105909346,29.0821649523584,29.5006869848787,19.2724089769766,32.8604364626176,19.4042389178597,26.1426557454021,23.331587888914,19.8780718708015,15.8127820801469,3.35565212115473,10.8804321301702,6.72187598284928,12.8629718017974,16.0458726365704,17.0171790451556,38.0354946416044,37.0293685490423,31.691570175309,19.3141383279405,18.6751907183339,11.2487464660175,11.8663963508037,10.6572017241915,24.5672090625092,31.890119341689,37.4319500433604,39.8267518078487,35.7552434297349,29.7077023779956,20.9825113904033,32.9500249888226,30.6705507258356,50.5570332635512,40.7428759697738,43.0306329347083,42.5490097119794,39.8296588945185,33.5759652020843,28.6502353806218,35.7354238721768,39.3933827022176,40.9499304041851,30.9360014747351,29.6133096062134,33.5519002485541,9.54150035998119,11.7891633766585,18.5513272769074,12.0459342777394,28.5587960157255,18.3499085156858,13.6453047664011,11.6486990645307,19.9431076587088,12.2709832256202,10.6512261887176,11.6602059588412,26.1968760784626,30.7983545794363,12.7402619853323,0,8.01016851741492,8.61423542615335,7.07734223020697,14.3871688446016,3.88406825470758,20.6334573300106,15.4401940821861,10.3518262626128,8.53277339847416,8.28974523039424,11.4061045921634,14.702991185572,26.449861547578,14.1707369781513,10.6153266233985,28.3091987407966,22.9675179198809,18.4252596191384,16.775258509631,64.1189945455288,77.2858348141649,10.9846533739694,1.55759661857696,1.19980546198682,0.889491589511453,59.6166744831194,52.1550687213234,45.6125298169698,74.5706333624866,74.9246289977868,46.1289458922223,53.8640993384955,20.0623546785123,17.1681619441928,20.4705434331277,44.6136734479325,23.6819206192121,24.8294272788151,25.0286360429435,21.4000841326715,33.1337750866967,29.85049682637,32.7956035959051,44.2382763963717,24.1436152084783,33.8499883500397,35.0142737086258,22.7963561724678,23.0779216857246,30.6461906539507,26.3401134602168,18.3111525473014,0,0.51469581422943,0.568326998791185,19.2626968458017,13.1334593589414,14.0448407939592,22.2540051450098,20.0699516382352,16.0437797402873,23.2533944750408,23.8763327245661,15.0627291653649,22.3801395882333,16.7450813360677,23.023541911023,29.5323974599171,27.8828646419634,27.5123158458762,60.1429252893404,44.2489833230923,10.5734010554815,8.19796756656987,20.6889603019177,18.3466970769746,17.5259747398047,12.3026950020239,10.0070119730192,12.3646656973163,11.8632265386128,11.6936257854048,13.3207660664143,13.9269530428806,15.7920910566487,15.2799299471218,9.94235029423593,12.1476176685164,16.8804431848243,19.1937501184344,25.9227792048085,18.5322708339236,16.2920089220806,19.6380295692892,26.5593455921881,24.7985048605732,24.3348028154131,22.7050781616113,13.0439155918346,9.34332592010127,3.53806191203765,4.04751802292737,3.85434230638156,5.30589751455317,4.83789118384698,6.90470729881945,7.29608520487659,4.11842119782122,5.75072826109418,10.7920874823866,9.67316786655138,6.81962970457202,8.43167843552987,12.0610880340842,25.8654466233247,23.6864264713106,18.903937267275,17.4837438348444,14.5507953938871,21.9433197248779,19.9956658344252,25.172240573656,21.2807444543358,20.1532867580385,24.0776700672806,24.7433605220764,24.6939524068231,24.3010418416939,3.01582567878545,4.89515115436839,16.7199852826472,20.1433824802455,53.7844476459103,44.5404409050372,18.5246488275643,76.2462200157206,25.871673992133,20.6932534477218,33.175203250851,26.7645053706858,25.3990488453929,25.4768877709949,29.9559919239422,30.9791209385991,23.7172666767914,75.1891880427029,19.3038515883245,20.2994788180671,20.8495307972577,32.1691739796444,25.2215762845929,13.8384962608339,9.97667737983678,11.6935149448657,15.651000322681,20.9055900601871,20.4158351602895,17.0860852854428,19.6073558111597,21.4904995396355,17.9211634577498,25.7838858120467,34.7248397868864,27.9094695748531,26.7772475430302,24.6487590286331,26.7783752799833,27.4687979107189,24.8469021109203,32.5777495552621,13.1416156515678,26.2671767871137,18.0833286405069,18.1374878235628,23.2508774442104,19.6620135265788,18.9802026964987,17.5630762727216,6.70405924248657,52.2899351669637,3.75915937755276,12.5895989457566,8.14855920426731,2.82552685507037,2.7338845544205,4.11800711771741,4.58941760983409,4.89830083132803,4.83699908315483,13.3653886522116,21.9853515538889,22.1618219168265,13.2846569210816,11.2907679847813,15.7221045897248,18.071822415566,18.7623344496513,18.3229159388821,14.7761069552644,63.9979492479533,15.2197093444731,13.4564891439581,13.2366792365678,15.5560950675238,11.1077448190849,14.8681390431885,12.9092962510329,18.0984094933091,27.0537108618334,19.8098979077325,27.938910607013,9.16432249821717,11.149886840959,10.4765176308124,4.67714962720062,10.5625750443814,6.95384741734427,6.49055427407832,10.0428878478713,8.07731599585181,6.09654453239999,8.36857336635776,11.5974878080305,9.1401249558313,11.103305707249,48.7470324772704,6.88156455459601,11.6628013592318,10.2409615982088,27.0465431645067,16.516057839704,18.3151624267265,25.5098371104088,33.103758866334,48.0039066224507,43.2705722316746,44.6858500482729,59.2893479085722,47.2706938641743,53.6329667146687,56.7018900194717,56.2901504030276,60.7210828038834,65.7555595924811,24.9089634202024,30.3258903784784,25.0978400458577,24.0675649897611,22.4286084011941,24.8188736407519,23.3359064191696,21.8397160673228,24.0689407193861,24.2589323293246,21.5457404906704,25.2759297457342,19.7583580761452,24.4576082186601,24.0080260234463,22.3858034903045,24.2198241224748,22.3774695737898,19.3680373377554,21.7854401798908,19.8864166383541,18.8124354528898,21.6976932852062,21.6566160782169,20.8922824522034,22.2536418755109,19.7562210702594,21.5717163379031,23.0866993537965,19.6399795080208,20.5238581354821,24.7246250762664,15.1415485972785,22.930652495523,26.6211123153975,34.4738597554365,26.2003401458857,23.8506869993611,24.2936181727431,24.4856475222662,26.2010654251076
|short_description=p1@Rab11fip3
|short_description=p1@Rab11fip3
}}
}}

Latest revision as of 02:44, 26 September 2015

Short description:p1@Rab11fip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab11fip3_5end
Coexpression cluster:MCL_coexpression_mm9:2943
Association with transcript: -66bp_to_ENSMUST00000120691_5end
EntrezGene:Rab11fip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab11fip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F226.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D929.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C419.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C338.04
Mouse Granule cells, donor2.CNhs12357.11731-123E337.03
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C824.57
Mouse Microglia, donor2.CNhs12634.11736-123E831.89
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D650.56
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F433.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.55
Mouse Schwann, donor1.CNhs12507.11728-123D99.54
Mouse Schwann, donor2.CNhs12573.11746-123F911.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C428.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.39
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D720.63
adrenal gland, embryo E14.CNhs11038.406-44C515.44
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C111.41
adrenal gland, neonate N25.CNhs11223.1377-27I314.70
amnion, adult pregnant day17.5.CNhs10488.583-22A826.45
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F528.31
bone (os femoris), neonate N16.CNhs11225.1525-43A622.97
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B264.12
cerebellum, neonate N30.CNhs11135.1395-42I277.29
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A459.62
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F145.61
cortex, adult.CNhs10473.12-14D574.57
cortex, neonate N30.CNhs11107.1392-42F274.92
diencephalon, adult.CNhs10482.20-12F246.13
diencephalon, neonate N30.CNhs11201.1388-42B253.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.17
epididymis, adult.CNhs10490.58-23B220.47
eyeball, adult.CNhs10484.31-12G444.61
eyeball, embryo E12.CNhs11016.345-16C623.68
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D421.40
eyeball, neonate N00.CNhs11207.633-15C633.13
eyeball, neonate N01.CNhs11140.1532-43E729.85
eyeball, neonate N02.CNhs11205.1551-44G832.80
eyeball, neonate N16.CNhs11188.777-19A244.24
forelimb, embryo E11.CNhs10596.335-25E224.14
forelimb, embryo E12.CNhs10600.359-14H233.85
forelimb, embryo E13.CNhs10589.384-1E235.01
forelimb, embryo E14.CNhs10577.413-26A822.80
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C430.65
forelimb, embryo E18.CNhs11008.1520-43B526.34
gonad, embryo E13.CNhs11044.1564-45I618.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E919.26
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I914.04
heart, embryo E14.CNhs10597.403-26D422.25
heart, embryo E15.CNhs11017.431-16C820.07
heart, embryo E16.CNhs11021.457-17C616.04
heart, embryo E17.CNhs11025.479-18E523.25
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E315.06
heart, neonate N03.CNhs11221.1349-25I222.38
heart, neonate N10.CNhs11118.749-24G116.75
heart, neonate N16.CNhs11209.782-15G123.02
heart, neonate N20.CNhs11127.821-26I629.53
heart, neonate N25.CNhs11196.1351-25D327.88
heart, neonate N30.CNhs11202.1390-42D227.51
hippocampus, adult.CNhs10478.13-16E860.14
hippocampus, neonate N00.CNhs11228.627-43G144.25
intestinal mucosa, adult.CNhs10506.860-29I310.57
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I520.69
intestine, embryo E13.CNhs11010.381-16D518.35
intestine, embryo E15.CNhs10602.976-16D817.53
intestine, embryo E16.CNhs10585.463-22H412.30
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E911.69
intestine, neonate N06.CNhs11102.688-20B813.32
intestine, neonate N07.CNhs11095.720-20F213.93
intestine, neonate N10.CNhs11098.755-23A515.79
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G112.15
kidney, embryo E14.CNhs10606.411-4I916.88
kidney, embryo E15.CNhs10997.434-16F819.19
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I218.53
kidney, embryo E18.CNhs11001.1288-20C716.29
kidney, neonate N00.CNhs11214.646-21G719.64
kidney, neonate N10.CNhs11206.758-6D526.56
kidney, neonate N20.CNhs11113.832-19I124.80
kidney, neonate N25.CNhs11122.1353-25F324.33
kidney, neonate N30.CNhs11203.1385-42H122.71
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H18.43
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B125.87
lung, embryo E12.CNhs10522.354-16G223.69
lung, embryo E14.CNhs10604.404-26F818.90
lung, embryo E15.CNhs11020.432-17C517.48
lung, embryo E16.CNhs10998.458-17B614.55
lung, embryo E17.CNhs10605.480-44A621.94
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C625.17
lung, neonate N06.CNhs11212.683-20E521.28
lung, neonate N07.CNhs11111.715-19A320.15
lung, neonate N10.CNhs11219.750-23E624.08
lung, neonate N20.CNhs11109.822-18A424.74
lung, neonate N25.CNhs11119.1359-25C724.69
lung, neonate N30.CNhs11133.1394-42H224.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C253.78
medulla oblongata, neonate N30.CNhs11200.1396-42A344.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C276.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.18
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.40
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I975.19
ovary, adult.CNhs10507.91-2I719.30
ovary, embryo E18.CNhs11040.505-44H720.30
ovary, neonate N00.CNhs11217.1299-22I420.85
oviduct, adult pregnant day01.CNhs10500.988-6G632.17
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E511.69
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I720.91
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G834.72
pituitary gland, embryo E12.CNhs11018.346-16E627.91
pituitary gland, embryo E13.CNhs11009.370-44C726.78
pituitary gland, embryo E14.CNhs11037.398-44A524.65
pituitary gland, embryo E15.CNhs10592.427-16B926.78
pituitary gland, embryo E16.CNhs11036.449-43F627.47
pituitary gland, embryo E17.CNhs11039.1265-44F524.85
pituitary gland, neonate N00.CNhs11190.1308-22E932.58
placenta, adult pregnant day10.CNhs10472.539-13I713.14
placenta, adult pregnant day17.CNhs10464.577-18G326.27
prostate, adult.CNhs10470.859-1F818.08
skin, adult.CNhs10492.30-1C318.14
skin, neonate N00.CNhs11124.650-25G423.25
skin, neonate N03.CNhs11215.662-22H319.66
skin, neonate N06.CNhs11097.693-20I518.98
skin, neonate N10.CNhs11108.762-6C417.56
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C952.29
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.84
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E321.99
stomach, embryo E15.CNhs10603.1252-16G822.16
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C615.72
stomach, neonate N03.CNhs11193.1340-24B818.07
stomach, neonate N07.CNhs11210.718-18A918.76
stomach, neonate N25.CNhs11104.1355-25E418.32
stomach, neonate N30.CNhs11134.1386-42I114.78
submandibular gland, adult.CNhs10469.59-29C164.00
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C513.24
testis, embryo E16.CNhs11033.470-26G515.56
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I418.10
testis, neonate N10.CNhs11204.763-44D927.05
testis, neonate N20.CNhs11110.839-18H319.81
testis, neonate N30.CNhs11130.1391-42E227.94
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I210.48
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C710.04
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D36.10
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A211.60
thymus, neonate N25.CNhs11125.1362-25G79.14
thymus, neonate N30.CNhs11132.1393-42G211.10
tongue, adult.CNhs10499.32-1B448.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.66
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E427.05
uterus, adult pregnant day19.CNhs10497.590-15F516.52
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D525.51
vesicular gland, adult.CNhs10491.51-27F833.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A344.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A553.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A860.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A965.76
whole body, embryo E11.CNhs11014.324-5I824.91
whole body, embryo E12.CNhs10587.857-27C930.33
whole body, embryo E13.CNhs10512.372-23H225.10
whole body, embryo E14.5.CNhs10578.420-27D224.07
whole body, embryo E14.CNhs10519.395-14B122.43
whole body, embryo E16.CNhs10514.453-14F224.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.93
whole body, embryo E17.5.CNhs10513.490-9F926.62
whole body, embryo E17.CNhs10517.475-3I534.47
whole body, embryo E18.CNhs10516.493-3B326.20
whole body, neonate N00.CNhs10525.657-19C223.85
whole body, neonate N01.CNhs10576.659-23C624.29
whole body, neonate N06.CNhs10515.692-21D124.49
whole body, neonate N10.CNhs10518.761-6B426.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.07e-1233
neuronal stem cell2.07e-1233
neuroblast2.07e-1233
electrically signaling cell2.07e-1233
ectodermal cell1.78e-1144
neurectodermal cell1.78e-1144
electrically responsive cell2.45e-1139
electrically active cell2.45e-1139
neural cell2.94e-1143
CNS neuron (sensu Vertebrata)2.09e-1023
neuroblast (sensu Vertebrata)2.09e-1023

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.42e-3295
ectoderm1.42e-3295
presumptive ectoderm1.42e-3295
central nervous system9.31e-3173
nervous system4.69e-2975
neurectoderm1.92e-2764
neural plate1.92e-2764
presumptive neural plate1.92e-2764
ecto-epithelium3.73e-2673
regional part of nervous system2.32e-2554
neural tube2.79e-2452
neural rod2.79e-2452
future spinal cord2.79e-2452
neural keel2.79e-2452
brain5.23e-2347
future brain5.23e-2347
regional part of brain2.96e-2246
pre-chordal neural plate7.17e-2249
structure with developmental contribution from neural crest7.71e-2292
anterior neural tube1.75e-1940
regional part of forebrain8.44e-1939
forebrain8.44e-1939
future forebrain8.44e-1939
gray matter9.00e-1734
brain grey matter1.25e-1529
regional part of telencephalon1.25e-1529
telencephalon1.25e-1529
anatomical conduit5.18e-13122
cerebral cortex8.17e-1221
cerebral hemisphere8.17e-1221
pallium8.17e-1221
tube1.14e-10114
regional part of cerebral cortex9.42e-1017
occipital lobe2.08e-0710
visual cortex2.08e-0710
neocortex2.08e-0710
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