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FFCP PHASE1:Mm9::chr17:25864671..25864742,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=106707
|EntrezGene=106707
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VCZ8
|UniProt=Q8VCZ8
|association_with_transcript=0bp_to_ENSMUST00000047273,NM_028009,uc008bbl.1,uc008bbm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000047273,NM_028009,uc008bbl.1,uc008bbm.1_5end
|cluster_id=chr17:25864671..25864742,+
|description=CAGE_peak_1_at_Rpusd1_5end
|description=CAGE_peak_1_at_Rpusd1_5end
|id=chr17:25864671..25864742,+
|id=chr17:25864671..25864742,+
|ontology_enrichment_celltype=CL:0000055!4.77e-07!50;CL:0002319!8.30e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002319,8.30e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.89e-21!75;UBERON:0001016!2.89e-21!75;UBERON:0001017!3.06e-21!73;UBERON:0005743!3.06e-21!73;UBERON:0002346!5.28e-21!71;UBERON:0003075!5.28e-21!71;UBERON:0007284!5.28e-21!71;UBERON:0000955!5.09e-20!50;UBERON:0006238!5.09e-20!50;UBERON:0001049!8.20e-20!52;UBERON:0005068!8.20e-20!52;UBERON:0006241!8.20e-20!52;UBERON:0007135!8.20e-20!52;UBERON:0002616!1.48e-19!49;UBERON:0004121!2.99e-19!102;UBERON:0000924!2.99e-19!102;UBERON:0006601!2.99e-19!102;UBERON:0000033!5.41e-18!63;UBERON:0003080!2.83e-14!40;UBERON:0002780!1.20e-13!39;UBERON:0001890!1.20e-13!39;UBERON:0006240!1.20e-13!39;UBERON:0003056!1.40e-13!49;UBERON:0002020!2.60e-12!34;UBERON:0002791!4.44e-11!29;UBERON:0003528!4.44e-11!29;UBERON:0001893!4.44e-11!29;UBERON:0000153!6.60e-09!94;UBERON:0007811!2.20e-08!86;UBERON:0000956!3.67e-08!21;UBERON:0001869!3.67e-08!21;UBERON:0000203!3.67e-08!21;UBERON:0002619!5.40e-08!17;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.89e-21,75;UBERON:0001017,3.06e-21,73;UBERON:0000073,5.94e-21,54;UBERON:0001049,8.20e-20,52;UBERON:0005068,8.20e-20,52;UBERON:0006241,8.20e-20,52;UBERON:0007135,8.20e-20,52;UBERON:0002346,5.74e-19,64;UBERON:0003075,5.74e-19,64;UBERON:0007284,5.74e-19,64;UBERON:0000955,3.03e-18,47;UBERON:0006238,3.03e-18,47;UBERON:0002616,8.64e-18,46;UBERON:0004121,4.18e-17,95;UBERON:0000924,4.18e-17,95;UBERON:0006601,4.18e-17,95;UBERON:0010371,3.62e-15,73;UBERON:0003080,2.83e-14,40;UBERON:0010314,5.06e-14,92;UBERON:0002780,1.20e-13,39;UBERON:0001890,1.20e-13,39;UBERON:0006240,1.20e-13,39;UBERON:0003056,1.40e-13,49;UBERON:0002020,2.60e-12,34;UBERON:0003528,4.44e-11,29;UBERON:0002791,4.44e-11,29;UBERON:0001893,4.44e-11,29;UBERON:0000956,3.67e-08,21;UBERON:0001869,3.67e-08,21;UBERON:0000203,3.67e-08,21;UBERON:0002619,5.40e-08,17;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10
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|phase1_expression=10.4096750618116,19.1936474201649,11.8299802241279,1.81478526784098,1.00179145989269,10.7442734023609,11.9142446703718,5.55230290798778,0.563154888606667,0.70219357896598,1.54096171402954,2.6324812468461,4.10881751834894,3.58423649917889,4.33042690360362,5.26435695213547,6.29605690315332,3.78554598429885,5.34746291062381,3.39511721438424,10.5453679787327,8.43973085207525,9.40319240900167,12.1594241322989,11.6998733344257,16.6527269593356,9.04600191934057,18.5305260109865,8.93110071444957,4.53654233567875,10.199603490144,14.6057054895715,9.22597181376855,15.8481681015439,8.08784535303569,7.31432439577366,9.18762103180661,4.60384793810598,3.906676722619,8.37637990358077,2.35292595212406,2.73218193983378,7.2826552954673,17.1219672446785,17.9437168258541,14.5001934207728,39.90195856175,14.6076854774899,13.6205433295373,10.1103547518627,12.4587915246573,5.75010257459886,3.35565212115473,2.17608642603403,2.01656279485478,7.46052364504246,8.02293631828519,8.76642556871652,13.5552028775931,13.7537654610729,10.1413024560989,15.9256930072492,20.4537803105562,17.997994345628,19.7773272513395,31.9716051725745,20.6724076257699,21.1320067926855,8.50254820929517,8.77538599155989,8.83364837675805,10.2834354385369,17.4486147351775,10.779190330916,10.4471563409878,7.35375029288017,24.2254938198655,21.4514727983115,22.2729473221553,8.44072241473241,10.6125666578795,10.939180781692,30.1517638921491,27.0126052815206,31.0180442986925,12.374400589894,12.5287079103211,9.87917062874093,10.677393259979,7.93501381121248,6.95674772884027,4.30211938490693,0.679971333707751,6.47643829965381,1.29955283489534,1.34408066129201,5.19644354487482,18.9177658061644,9.61208217030615,14.8402621294343,7.32385782838739,7.69958864485907,2.54805239706646,0,6.71122227134764,6.08063677140237,4.54972000513305,2.74041311325744,1.8125651855302,13.0629082377046,11.450031566565,9.74289530598852,13.1450833435953,12.8114244469729,10.5829836422134,11.4356598110005,11.8653584512499,4.62717942143717,6.19227386364912,6.95597454773859,7.06692859073259,5.81850303762267,1.86391761218122,21.3729981818429,21.5730108017859,5.62005521458901,8.62668896442626,8.39863823390771,8.51370521389534,33.2535219478706,44.8350590762254,15.2041766056566,43.8037286884537,35.0330176542553,26.3890816590641,28.3922210368576,10.8968119319838,8.45967400148633,9.09801930361229,4.62972082950243,12.2313216384941,13.3343220571414,10.0834792690996,8.74087943447147,9.5251098811859,11.914575986491,8.24575176125614,5.95017752699736,10.7783996466421,10.0226222488944,10.7330185740009,10.7405908889512,11.6779844674751,8.70630416305416,9.4659782747654,9.75267907410617,11.937624184325,9.00717674901503,6.81992398549422,5.79952163099405,8.44293815931946,7.92273070428465,6.62885259638589,7.87056926989615,5.707883176833,8.60375595576509,5.09719462659276,5.3712057488898,5.43047504714485,5.74586124276833,4.70199095365963,4.82459958503597,7.02560368931362,6.03928884421673,43.3197294042102,9.77593817603202,3.63460661282178,3.17340679996253,9.59797127408553,11.6118335930219,7.34544529535932,7.66397393568702,5.78182913996663,8.56015317506516,6.64340686162316,7.24675400785648,6.28338022000674,10.1467800740987,7.60359939764569,4.49409704327111,4.32276099749388,4.97853183135918,11.7594098590911,6.16941968092536,10.1436962105772,6.31319116320474,5.43066964069352,6.52263124979963,7.01925562079256,6.4948465111025,7.53593893638599,6.66344685177723,3.55743152504579,6.34011401721157,6.6830058338489,8.09503604585473,5.88294352026658,6.02942899381042,6.3656462945355,4.89083433666378,3.56697498905078,4.11842119782122,1.43768206527355,3.34926852901653,4.99260276983297,3.78868316920668,3.22915344339442,1.92977408545347,8.86815312799702,10.0430448238357,10.7556884451737,9.16623463186016,9.62230017982859,13.4005005953453,13.0924002487308,10.1469496886055,7.88175720530955,8.858587585951,8.29164797018933,9.66793556822854,8.11619414769709,7.37710198765709,4.52373851817817,5.98296252200581,5.4094070032094,4.13905119457099,38.2110404170945,29.1857099614586,19.8361283905777,7.06918596172244,8.83423014365519,10.9322848403059,7.53981892064796,8.84184552424442,7.12955757063661,5.66153061577665,8.09621403349789,7.01414058987149,5.53402889125133,15.1021018718249,9.79386587937053,15.4917075190512,13.6825045857004,7.58862565673663,2.65490276679926,13.8384962608339,9.97667737983678,7.73280826999182,9.7449624650655,8.60818414242997,9.04499026088774,6.5436071305951,10.6949213515416,7.9009189483954,8.4334886859999,3.09406629744561,14.6389030474129,10.8036656418786,13.712020480972,9.43082954139006,7.62563004661776,10.5237602385222,10.86023535974,17.9634319977614,9.62154003061212,8.26145076368899,7.71849393192367,4.61681508236144,5.8127193610526,6.63442174209714,6.68485126417564,8.69946768648825,4.66369338607761,30.5951748317341,5.98048082792484,8.46186158649212,5.37064129372164,5.46268525313604,4.51090951479383,4.80434163733698,7.64902934972349,8.81694149639045,7.60099855924331,2.86401185404534,14.2351197111511,11.3858901591035,7.77638453916969,8.15444354456428,6.98760203987768,8.76618251501335,7.93473174963225,7.32916637555283,6.61036363788144,5.59205381778233,5.07323644815771,12.4098733216502,12.5748452747394,15.3616438791798,10.5911055251739,9.12363077650202,10.3274370008263,12.3694165601753,16.5677764192623,6.28118714147616,4.32045009386798,3.16011120628178,12.3662381327,8.11416561602135,6.75588279484534,9.667441566044,6.15912199821921,10.0964177596774,7.53216588590344,7.16861794631848,7.01102621225999,5.84791873793675,5.06780979846713,5.77271049841977,6.19447581562315,7.70883304291719,4.43971906748129,4.30626511725483,5.54019234001459,7.34120457322324,8.44571139530319,7.50921659495787,4.28736758158132,5.517293144389,27.1080884456192,28.0798394269378,25.2074025913335,18.3882905107746,33.5690434687615,31.7265436903674,30.3760125104313,38.2773022740587,38.0639623546732,36.2432218226274,9.13328658740755,12.768795948833,11.7806187970353,5.59145449257076,6.28839487883947,6.25067928730048,6.22290837844523,4.73880631649457,5.13470735346904,7.07552192938633,4.56262739802432,8.29955902098735,5.3375659257833,5.8262888688431,5.05432126809397,5.71552429539688,6.37363792696705,8.48800570040302,3.70877310722976,7.06554816645107,3.77156177623957,4.61437096014278,5.96090474868302,6.54058874845478,5.8347815857505,5.58456412085065,8.04883080640199,6.05060336307039,6.24698923690964,4.48913817326191,5.45721083371201,7.19082721341613,6.54769669071503,5.88759996506671,5.78719832943424,10.4920442733937,7.71974307869848,5.58664740525576,8.03410994689142,9.48543102213917,5.79669589051054
|short_description=p1@Rpusd1
|short_description=p1@Rpusd1
}}
}}

Latest revision as of 02:27, 26 September 2015

Short description:p1@Rpusd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rpusd1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000047273, NM_028009, uc008bbl.1, uc008bbm.1_5end
EntrezGene:Rpusd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rpusd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I218.53
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.50
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.97
Mouse Microglia, donor1.CNhs12629.11718-123C820.67
Mouse Microglia, donor2.CNhs12634.11736-123E821.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D910.68
Mouse Schwann, donor2.CNhs12573.11746-123F97.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F512.81
adrenal gland, neonate N00.CNhs11191.1311-23C110.58
adrenal gland, neonate N25.CNhs11223.1377-27I311.44
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B221.37
cerebellum, neonate N30.CNhs11135.1395-42I221.57
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.51
corpora quadrigemina, adult.CNhs10501.16-22A433.25
corpus striatum, adult.CNhs10487.19-21D844.84
corpus striatum, neonate N00.CNhs11226.630-43F115.20
cortex, adult.CNhs10473.12-14D543.80
cortex, neonate N30.CNhs11107.1392-42F235.03
diencephalon, adult.CNhs10482.20-12F226.39
diencephalon, neonate N30.CNhs11201.1388-42B228.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.46
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C612.23
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C69.53
eyeball, neonate N01.CNhs11140.1532-43E711.91
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E210.78
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I69.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.01
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F58.44
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C87.87
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G14.70
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E843.32
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F210.15
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I911.76
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A36.37
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A613.40
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E57.88
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C238.21
medulla oblongata, neonate N30.CNhs11200.1396-42A329.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H715.49
ovary, neonate N00.CNhs11217.1299-22I413.68
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C713.71
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F610.52
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H36.63
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C930.60
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.60
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E314.24
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B88.77
stomach, neonate N07.CNhs11210.718-18A97.93
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I16.61
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F512.41
testis, embryo E15.CNhs11034.443-27C512.57
testis, embryo E16.CNhs11033.470-26G515.36
testis, embryo E17.CNhs11029.486-18I510.59
testis, embryo E18.CNhs11027.503-18G59.12
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I412.37
testis, neonate N10.CNhs11204.763-44D916.57
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F810.10
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D37.01
thymus, neonate N10.CNhs11194.748-24E45.85
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.77
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I89.13
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell8.30e-0743

Uber anatomy
Ontology termp-valuen
nervous system2.89e-2175
central nervous system3.06e-2173
regional part of nervous system5.94e-2154
neural tube8.20e-2052
neural rod8.20e-2052
future spinal cord8.20e-2052
neural keel8.20e-2052
neurectoderm5.74e-1964
neural plate5.74e-1964
presumptive neural plate5.74e-1964
brain3.03e-1847
future brain3.03e-1847
regional part of brain8.64e-1846
ectoderm-derived structure4.18e-1795
ectoderm4.18e-1795
presumptive ectoderm4.18e-1795
ecto-epithelium3.62e-1573
anterior neural tube2.83e-1440
structure with developmental contribution from neural crest5.06e-1492
regional part of forebrain1.20e-1339
forebrain1.20e-1339
future forebrain1.20e-1339
pre-chordal neural plate1.40e-1349
gray matter2.60e-1234
brain grey matter4.44e-1129
regional part of telencephalon4.44e-1129
telencephalon4.44e-1129
cerebral cortex3.67e-0821
cerebral hemisphere3.67e-0821
pallium3.67e-0821
regional part of cerebral cortex5.40e-0817
occipital lobe1.76e-0710
visual cortex1.76e-0710
neocortex1.76e-0710
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