FFCP PHASE1:Hg19::chr11:117074952..117074998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117074952..117074998,- | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_at_chr11:117074952..117074998,- | |description=CAGE_peak_at_chr11:117074952..117074998,- | ||
|id=chr11:117074952..117074998,- | |id=chr11:117074952..117074998,- | ||
|ontology_enrichment_celltype=CL:0000055!4.89e-27!180;CL:0000680!1.18e-17!57;CL:0000056!1.18e-17!57;CL:0000355!1.18e-17!57;CL:0000393!4.96e-17!60;CL:0000211!4.96e-17!60;CL:0000183!1.36e-16!59;CL:0000187!1.69e-16!54;CL:0000192!2.18e-16!42;CL:0000514!2.18e-16!42;CL:0000359!4.40e-16!32;CL:0000057!1.18e-10!75;CL:0000222!2.98e-09!119 | |ontology_enrichment_celltype=CL:0000055!4.89e-27!180;CL:0000680!1.18e-17!57;CL:0000056!1.18e-17!57;CL:0000355!1.18e-17!57;CL:0000393!4.96e-17!60;CL:0000211!4.96e-17!60;CL:0000183!1.36e-16!59;CL:0000187!1.69e-16!54;CL:0000192!2.18e-16!42;CL:0000514!2.18e-16!42;CL:0000359!4.40e-16!32;CL:0000057!1.18e-10!75;CL:0000222!2.98e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.04e-18;32!CL:0000192;1.07e-10;43!CL:0000134;1.81e-07;55!CL:0000187;4.58e-07;55!CL:0002334;8.32e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.72e-19,32;CL:0000192,5.05e-15,43;CL:0000514,5.05e-15,43;CL:0000680,2.69e-14,58;CL:0000056,2.69e-14,58;CL:0000355,2.69e-14,58;CL:0000057,5.45e-13,76;CL:0000187,6.72e-13,55;CL:0000393,3.13e-11,61;CL:0000211,3.13e-11,61;CL:0000222,1.87e-07,121;CL:0000048,2.84e-07,427;CL:0002334,8.52e-07,12;CL:0000723,9.76e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-10;43!CL:0000355;1.00e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.77e-17!63;UBERON:0001015!3.77e-17!63;UBERON:0000383!3.77e-17!63;UBERON:0000914!1.21e-16!83;UBERON:0002329!1.21e-16!83;UBERON:0003077!1.21e-16!83;UBERON:0003059!1.21e-16!83;UBERON:0007282!1.21e-16!83;UBERON:0009618!1.21e-16!83;UBERON:0007285!1.21e-16!83;UBERON:0001134!2.77e-16!61;UBERON:0002036!2.77e-16!61;UBERON:0003082!2.77e-16!61;UBERON:0005256!6.14e-16!143;UBERON:0004290!2.65e-15!70;UBERON:0000486!2.78e-15!82;UBERON:0004872!5.48e-12!84;UBERON:0002100!8.43e-12!216;UBERON:0001637!3.14e-11!42;UBERON:0003509!3.14e-11!42;UBERON:0004572!3.14e-11!42;UBERON:0003104!5.64e-10!238;UBERON:0009142!5.64e-10!238;UBERON:0003914!1.06e-09!118;UBERON:0000481!1.30e-09!347;UBERON:0004573!1.45e-09!33;UBERON:0004571!1.45e-09!33;UBERON:0002049!2.15e-09!79;UBERON:0007798!2.15e-09!79;UBERON:0000468!2.49e-09!659;UBERON:0001981!4.93e-09!60;UBERON:0007500!4.93e-09!60;UBERON:0004537!4.93e-09!60;UBERON:0006965!4.93e-09!60;UBERON:0000475!7.44e-09!365;UBERON:0001009!2.20e-08!113;UBERON:0004535!4.65e-08!110;UBERON:0007100!1.87e-07!27;UBERON:0000055!1.98e-07!69;UBERON:0000948!3.17e-07!24;UBERON:0005498!3.17e-07!24;UBERON:0004140!3.17e-07!24;UBERON:0009881!3.17e-07!24;UBERON:0004141!3.17e-07!24;UBERON:0003084!3.17e-07!24;UBERON:0007005!3.17e-07!24;UBERON:0004139!3.17e-07!24;UBERON:0004291!3.17e-07!24;UBERON:0000490!5.64e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.69e-11;33!UBERON:0004571;8.69e-11;33!UBERON:0001637;3.14e-10;42!UBERON:0003509;3.14e-10;42!UBERON:0004572;3.14e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,8.44e-15,160;UBERON:0009142,8.44e-15,160;UBERON:0001637,1.17e-14,42;UBERON:0003509,1.17e-14,42;UBERON:0004572,1.17e-14,42;UBERON:0005256,1.61e-14,122;UBERON:0002385,1.48e-13,64;UBERON:0001015,1.48e-13,64;UBERON:0000383,1.48e-13,64;UBERON:0007503,1.41e-12,78;UBERON:0001134,1.50e-12,62;UBERON:0002036,1.50e-12,62;UBERON:0003082,1.50e-12,62;UBERON:0004573,2.08e-12,33;UBERON:0004571,2.08e-12,33;UBERON:0007524,3.09e-12,73;UBERON:0002329,5.90e-12,71;UBERON:0003059,5.90e-12,71;UBERON:0007282,5.90e-12,71;UBERON:0004290,5.90e-12,71;UBERON:0009618,5.90e-12,71;UBERON:0000486,1.13e-11,83;UBERON:0004872,1.15e-11,83;UBERON:0003914,1.22e-11,117;UBERON:0003077,1.32e-11,72;UBERON:0007285,1.32e-11,72;UBERON:0002049,4.40e-11,78;UBERON:0007798,4.40e-11,78;UBERON:0007500,4.60e-11,59;UBERON:0001981,4.60e-11,59;UBERON:0004537,4.60e-11,59;UBERON:0006965,4.60e-11,59;UBERON:0002100,4.31e-10,199;UBERON:0004535,1.49e-09,109;UBERON:0000055,1.61e-09,68;UBERON:0001009,2.39e-09,112;UBERON:0000926,2.55e-09,315;UBERON:0004120,2.55e-09,315;UBERON:0006603,2.55e-09,315;UBERON:0000490,3.08e-07,148 | |||
|phase1_expression=18.7128730648673,10.9191267184401,10.007762690814,48.0351832095026,35.756887554183,51.4679729219218,35.4619829435635,0,0.261185628199839,2.7030733015166,9.07141518364156,0.873765488520689,3.16520373874144,0.37129905888014,1.98838425436749,12.7741777825837,6.62963980826375,15.3365118981348,11.2224543721817,0.738726348460727,0.612002073732759,6.89600387251793,2.86235987131057,1.09499540058307,3.26410862946487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,2.43806866313962,2.68280343881454,6.77671577770711,5.06014813338393,3.00802746381534,3.62116297402059,0,1.94653948121054,3.40325341790644,9.31263469342769,3.24988707064566,1.63723844372141,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,15.9031024542502,5.06522046658319,2.1185468930115,2.0078563452417,1.41867352879343,14.5776176037,14.9448594021587,13.5667151629438,0,1.48181739276657,1.79808093424805,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,1.18800285728205,5.19260551484969,1.82032272387605,5.74894513452991,0,0,0,4.82875382968922,20.8411701143333,8.71380741658261,8.96114246964166,5.202299434977,4.91181994282705,4.4505699243508,3.00091096084402,1.03052529238439,6.44101350114073,5.95573940261087,0.843881661206331,3.89748020644795,5.80597680761463,3.31379635112278,0.323292113637624,9.23024940543197,4.23158812556089,5.93462073086707,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0.756962552626885,0.36497735907583,6.25798129319264,12.2215778256648,4.14404764057442,5.10804720835177,3.60939740834793,0.118306800039844,0,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,5.60967095213783,3.7041661019826,7.3504355692771,0,0,1.18157981336281,0,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.277765335475589,0,0,1.44331342025273,0.231860809950154,3.87448690978212,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.00789276919316,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.336393253036082,0,0.7333828582095,6.72212921940444,7.15312891703765,0,12.7650295960738,11.4408180602503,1.02882949704857,0,0.266422179016099,4.43231780340257,1.08524321078289,1.64648067356154,0.65147236858747,5.33087923113819,4.75171123760058,2.1100756394171,2.61460037580088,6.79816340037988,0,0,0,17.0133647399024,11.4861935834114,0,5.06734573336527,3.08214483825575,2.14873155887875,0,0,0,0,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0.858840442033979,2.50085260529839,2.71265023699736,33.4833087064599,19.4487597788906,12.6161932027148,10.6598687643369,2.40756879782175,0,5.17365356462525,4.64957918974806,11.9839959552107,0.781952530212746,0.783204629850962,0.343143423810856,0,0,0,0.303127571446259,0,0.907170879989041,3.72161711728165,6.59886485138669,16.2782854771183,3.07533958213682,4.09365799253363,13.511729376063,22.2627099667486,1.69630663182921,7.10246901252508,0.739144404124282,0.519254429183621,6.15915005837784,0.241718899183244,1.40354529212299,0,1.95184561879831,1.27463817604702,3.40923478894503,1.35359883872224,0.770153371044148,0,0,0.844413031143006,0,0,1.0795795805107,1.54227252690289,0.812839312631559,5.51858751240339,0,0,0.895499018888713,0,0,0,0.328014645699706,1.30151357865721,0.515205058238611,0.183138929636687,0.165018999841176,0,0,6.42735719376638,0.48335359146061,0.924291702687866,0.460511024178389,0.275673144969061,0.107420244868274,0.435050081742686,0,4.5406338179836,0.165284915360978,0.960950336825531,0.127612712494584,0,12.0859842817294,4.09256050879832,2.7881490806424,0.924100740528266,4.25844824253617,0,7.4129687641568,7.87186877080952,2.232950216158,10.440521015718,9.34087950226742,1.535386747868,0.42793898803392,0.636406495851874,8.63443504219153,0.539617372749944,1.37268514868027,0.235624804691373,3.03273722359974,7.92551605865041,9.68894449349657,0.975267478179181,5.84912375115083,26.4125366891889,2.72999822815972,0.989838023675989,1.13008116620243,2.75682671773062,8.62470667813585,17.9764862954043,1.73632660280006,0,11.5658914868741,10.8438224334913,15.4932581392733,0.573645408816206,5.30544821470854,7.84676313258751,0.709522128141196,0.844430541190656,4.61012850143863,0,0,0,0,0,0.188287601553558,3.44404298136984,3.36942951335251,2.21715076768338,2.75668080248351,0,0,0.569647187174163,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,20.124046813358,1.93398740871803,0,0,0,28.6156420648863,0,0,0,5.03081368748361,0,0,0,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0.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| ||
|short_description=p@chr11:117074952..117074998,- | |short_description=p@chr11:117074952..117074998,- | ||
}} | }} |
Latest revision as of 18:33, 23 July 2015
Short description: | p@chr11:117074952..117074998, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117074952..117074998, - |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.72e-19 | 32 |
smooth muscle cell | 5.05e-15 | 43 |
smooth muscle myoblast | 5.05e-15 | 43 |
muscle precursor cell | 2.69e-14 | 58 |
myoblast | 2.69e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.69e-14 | 58 |
fibroblast | 5.45e-13 | 76 |
muscle cell | 6.72e-13 | 55 |
electrically responsive cell | 3.13e-11 | 61 |
electrically active cell | 3.13e-11 | 61 |
mesodermal cell | 1.87e-07 | 121 |
multi fate stem cell | 2.84e-07 | 427 |
preadipocyte | 8.52e-07 | 12 |
somatic stem cell | 9.76e-07 | 433 |