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FFCP PHASE1:Mm9::chr17:10512189..10512245,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19317
|EntrezGene=19317
|HGNC=
|HGNC=
|MCL_coexpression_id=2190
|TSSclassifier=NA
|UniProt=Q9QYS9,F8WHX7
|UniProt=Q9QYS9,F8WHX7
|association_with_transcript=0bp_to_ENSMUST00000042296,ENSMUST00000042434,ENSMUST00000097414,ENSMUST00000115697,NM_001159516,NM_001159517,NM_021881,uc008akb.2,uc008akc.2,uc008ake.2,uc012ajv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000042296,ENSMUST00000042434,ENSMUST00000097414,ENSMUST00000115697,NM_001159516,NM_001159517,NM_021881,uc008akb.2,uc008akc.2,uc008ake.2,uc012ajv.1_5end
|cluster_id=chr17:10512189..10512245,-
|description=CAGE_peak_1_at_Qk_5end
|description=CAGE_peak_1_at_Qk_5end
|id=chr17:10512189..10512245,-
|id=chr17:10512189..10512245,-
|ontology_enrichment_celltype=CL:0000221!7.04e-14!44;CL:0000133!7.04e-14!44;CL:0002319!2.95e-13!43;CL:0000540!2.02e-10!33;CL:0000047!2.02e-10!33;CL:0000031!2.02e-10!33;CL:0000404!2.02e-10!33;CL:0000055!2.11e-10!50;CL:0000117!1.47e-08!23;CL:0000337!1.47e-08!23;CL:0000393!3.57e-08!39;CL:0000211!3.57e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000221,7.03e-14,44;CL:0000133,7.03e-14,44;CL:0002319,2.95e-13,43;CL:0000540,2.02e-10,33;CL:0000047,2.02e-10,33;CL:0000031,2.02e-10,33;CL:0000404,2.02e-10,33;CL:0000117,1.47e-08,23;CL:0000337,1.47e-08,23;CL:0000393,3.56e-08,39;CL:0000211,3.56e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.23e-21!75;UBERON:0001016!5.23e-21!75;UBERON:0001017!7.81e-20!73;UBERON:0005743!7.81e-20!73;UBERON:0004121!1.37e-16!102;UBERON:0000924!1.37e-16!102;UBERON:0006601!1.37e-16!102;UBERON:0001049!3.99e-13!52;UBERON:0005068!3.99e-13!52;UBERON:0006241!3.99e-13!52;UBERON:0007135!3.99e-13!52;UBERON:0000025!2.93e-12!114;UBERON:0002020!4.81e-12!34;UBERON:0000955!5.06e-12!50;UBERON:0006238!5.06e-12!50;UBERON:0000033!1.04e-11!63;UBERON:0002616!1.38e-11!49;UBERON:0002346!3.17e-11!71;UBERON:0003075!3.17e-11!71;UBERON:0007284!3.17e-11!71;UBERON:0004111!3.97e-11!122;UBERON:0002791!3.08e-09!29;UBERON:0003528!3.08e-09!29;UBERON:0001893!3.08e-09!29;UBERON:0003080!6.20e-08!40;UBERON:0003056!1.36e-07!49;UBERON:0002780!1.80e-07!39;UBERON:0001890!1.80e-07!39;UBERON:0006240!1.80e-07!39;UBERON:0007100!3.94e-07!18;UBERON:0000948!3.94e-07!18;UBERON:0005498!3.94e-07!18;UBERON:0004140!3.94e-07!18;UBERON:0009881!3.94e-07!18;UBERON:0004141!3.94e-07!18;UBERON:0003084!3.94e-07!18;UBERON:0007005!3.94e-07!18;UBERON:0004139!3.94e-07!18;UBERON:0004291!3.94e-07!18;UBERON:0003076!7.73e-07!12;UBERON:0003057!7.73e-07!12;UBERON:0000956!8.42e-07!21;UBERON:0001869!8.42e-07!21;UBERON:0000203!8.42e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.21e-21,75;UBERON:0001017,7.79e-20,73;UBERON:0010314,1.01e-18,92;UBERON:0004121,3.28e-18,95;UBERON:0000924,3.28e-18,95;UBERON:0006601,3.28e-18,95;UBERON:0000073,2.37e-14,54;UBERON:0001049,3.98e-13,52;UBERON:0005068,3.98e-13,52;UBERON:0006241,3.98e-13,52;UBERON:0007135,3.98e-13,52;UBERON:0002346,6.62e-13,64;UBERON:0003075,6.62e-13,64;UBERON:0007284,6.62e-13,64;UBERON:0000025,2.93e-12,114;UBERON:0002020,4.80e-12,34;UBERON:0010371,5.49e-12,73;UBERON:0004111,3.97e-11,122;UBERON:0000955,2.81e-10,47;UBERON:0006238,2.81e-10,47;UBERON:0002616,7.35e-10,46;UBERON:0003528,3.08e-09,29;UBERON:0002791,3.08e-09,29;UBERON:0001893,3.08e-09,29;UBERON:0003080,6.19e-08,40;UBERON:0003056,1.36e-07,49;UBERON:0002780,1.80e-07,39;UBERON:0001890,1.80e-07,39;UBERON:0006240,1.80e-07,39;UBERON:0007100,3.94e-07,18;UBERON:0000948,3.94e-07,18;UBERON:0005498,3.94e-07,18;UBERON:0004140,3.94e-07,18;UBERON:0009881,3.94e-07,18;UBERON:0004141,3.94e-07,18;UBERON:0003084,3.94e-07,18;UBERON:0007005,3.94e-07,18;UBERON:0004139,3.94e-07,18;UBERON:0004291,3.94e-07,18;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12;UBERON:0000956,8.42e-07,21;UBERON:0001869,8.42e-07,21;UBERON:0000203,8.42e-07,21
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3316699992,54.8725723981402,33.0916980914195,44.5293221307869,40.6853443954853,43.9285926276023,59.8521917093345,62.498104725096,49.7033292577869,32.3722721906848,28.8030006257865,8.53230025696081,15.0016659314722,11.6063381596255,13.2519239437351,16.2914293057408,15.6958270277199,13.2214994471966,11.6674726467916,12.4188733436222,13.56481158459,12.8049255123787,12.7669823769076,13.6620815129268,10.7526750007043,41.4916602015837,15.3170307828105,24.0433135713395,12.2555769945777,17.1938738688649,20.0820248732765,20.696133542201,17.5782070844834,5.517293144389,86.9717837630282,69.9694359490909,78.4866853411973,50.8685419737315,62.3425092991284,62.6976934833451,83.7027900287439,56.2901504030276,53.9239466691203,49.7049899281747,53.450484005851,41.4985868337072,30.9027826414983,30.8745530676733,36.053463972013,39.526354316753,36.2262166316633,45.5337476497956,39.4730627797933,47.5070758115939,34.2197054851824,45.4589482740444,54.8739233773511,60.6958444798161,66.3954021126889,48.5819565108735,65.5905284847882,71.3764115715709,53.5711671044299,50.7836274463671,40.1157025290936,48.9833224999771,56.2709408275677,44.9120427393895,50.6308466634479,53.0533591480812,51.4027603772491,51.0355240189415,52.8278002860402,32.5462517561488,53.6230281921267,59.6937163195915,54.018497698399,54.692704938646,39.7387618621151,33.2248068657468,31.8146987485755,40.6106292151284,49.5436780058304,35.956401316481,47.0691706309456
|phase1_expression=50.9273333793245,0,0,0,0.500895729946347,0.503637815735669,0,4.9066862907799,35.1971805379167,27.3855495796732,4.28044920563762,4.62678522172951,5.9920255475922,3.84649770643589,21.6521345180181,24.4995073541689,27.9824751251259,17.9813434254195,14.8083588294198,12.3072999021429,46.4336364224841,12.0142050953071,9.40319240900167,1.91990907352088,2.75291137280604,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,7.62036808151557,11.6862309641068,0,0,0,0,30.1342774130574,18.7520482685712,31.4114246384279,19.9998705930545,25.2726829434625,33.0147040061184,13.9745467952891,15.3079166141467,28.0826530807373,19.559783608701,80.8873330171457,37.3466510648602,52.3016428509822,40.176103006479,73.3138078261355,25.6707387268337,7.97898356212479,6.04968838456435,20.8380143189117,21.7765414353455,26.814948798427,47.9490012237247,41.7902873624906,33.5930643858275,18.9752937958714,15.1180115338894,37.7957881258188,19.7773272513395,30.5506449426823,88.9812328239662,106.428470574071,58.2735621173644,37.9366686712051,41.4340173862223,146.253304014747,117.281195245307,49.1188104851966,66.9959842417472,34.0110951045708,121.127469099328,195.872376622678,204.757508830573,33.4991170834692,48.8544016836868,45.8403766089949,156.621662439775,113.678047226399,174.037204217787,128.752691851993,141.659822395107,66.1718032679817,88.0695628464931,94.3888785733751,31.5952292684829,14.6272059086836,12.2394840067395,8.63525106620507,7.79731700937203,6.72040330646003,23.5946625821343,17.2134625803838,9.09251016110041,14.8402621294343,130.561850132983,46.1975318691544,48.4129955442627,49.7746692207332,9.09262372247099,11.9079136773296,8.59391556525132,15.7573754012303,11.6522047641227,26.8680271707333,19.4303565978072,17.354532263792,15.912469310668,22.3069508017881,26.5750478126693,32.5476471543859,22.494742063828,49.8867781373695,19.4614321428972,55.1624958320665,48.805975579747,35.3958934788712,3.72783522436244,60.3128441843787,82.7314491913148,2.81002760729451,26.1196971422906,20.3966928537759,22.6185004190055,94.8174747432528,75.945100067892,47.1203820423242,69.182079436526,81.5732308883754,94.959136363719,119.085087091734,32.2830783405503,25.379022004459,4.54900965180614,21.0441855886474,32.2698698547505,32.4161967251197,30.7906241967147,35.8677466449002,47.8296589033835,33.9501358754852,44.0398105430725,24.3181168494675,32.1196309469935,38.1994281938995,30.967397852855,24.769117764316,25.0242524303038,37.611233984394,23.4591635505056,35.8261680273288,16.1509033082044,13.8967869841946,16.76564646434,59.85934826276,57.2243586353875,58.1600458519078,68.655973319711,80.6733350164356,89.4749254746794,98.8269265189233,94.1639638912663,100.6517251205,109.596860042378,90.6204401716606,105.551590028704,114.182190179185,81.8921930035619,83.3421860501909,70.2368428204185,56.9062506457443,0.991256348951394,2.11560453330835,24.3148605610167,27.4039272795317,18.0414445850931,9.07575860805041,8.00560957841533,9.70150693174052,4.2707615539006,7.90554982675252,10.0534083520108,7.16243299348143,9.74820435595601,2.69645822596266,4.97117514711797,3.38540164532424,19.3461258972143,31.5325894802852,30.4310886317317,28.7148372261893,29.0928730751439,36.4004905230753,26.2431629065668,25.5365556004712,19.3108435244891,15.0544539984597,8.89357881261447,19.3540322630669,17.6903095601883,14.6160373050155,17.8516906821883,16.1588697034119,16.5506803657923,21.0018180339092,17.6727397184789,12.6298250066517,63.258010872036,14.8856379067401,14.0416952901552,12.8815227753027,11.6608318789243,11.0962009913574,60.2295399943131,32.0240485892119,38.1338044874341,30.2146252679835,34.4994664984098,56.4496087578919,58.0826483761874,83.1269339874223,48.8668946729192,53.151525515706,77.4950175675387,60.3016998153916,71.3188975106149,70.0101443534516,49.7611236999598,21.2123216689297,6.39293554924747,10.2096596132751,123.6239542906,181.795325904507,26.2295912602681,58.0683132570058,42.5936096211947,32.406415776621,53.6404260354669,60.4591058819957,76.6427438843436,88.8860306676934,38.457016659115,41.5003318234063,47.8298211315293,75.1891880427029,23.5620541445726,21.1898068364034,37.6268876106761,20.7862354945395,6.63725691699814,13.352934988524,18.4417369748498,13.013750503157,10.6308681437078,15.0643222492524,19.898978573953,16.3590178264877,15.6858846489277,11.6933600436252,2.10837217149998,9.28219889233682,7.48967132658334,33.8514856778863,19.7918786187614,25.0774330986963,24.4729522426338,24.4365280114837,25.6696472139309,13.0919928119278,16.6616912725234,35.1641237633942,7.27743713581374,32.977250588296,30.0323833654384,37.8162039299537,25.3069369286649,24.6211349617592,6.12109756922687,196.736245433151,18.9666677685616,27.4494534391086,23.7048995033231,23.3576886685817,24.6049609897845,18.0734756833153,20.0574547392749,20.1530091346068,22.5265957301211,2.86401185404534,26.2558874672342,23.7883776538413,16.4168118049138,17.5634168652154,13.1017538247707,14.1607563704062,17.1092653351445,10.7319936213452,7.12882353104861,7.45607175704311,21.4203316699992,54.8725723981402,33.0916980914195,44.5293221307869,40.6853443954853,43.9285926276023,59.8521917093345,62.498104725096,49.7033292577869,32.3722721906848,28.8030006257865,8.53230025696081,15.0016659314722,11.6063381596255,13.2519239437351,16.2914293057408,15.6958270277199,13.2214994471966,11.6674726467916,12.4188733436222,13.56481158459,12.8049255123787,12.7669823769076,13.6620815129268,10.7526750007043,41.4916602015837,15.3170307828105,24.0433135713395,12.2555769945777,17.1938738688649,20.0820248732765,20.696133542201,17.5782070844834,5.517293144389,86.9717837630282,69.9694359490909,78.4866853411973,50.8685419737315,62.3425092991284,62.6976934833451,83.7027900287439,56.2901504030276,53.9239466691203,49.7049899281747,53.450484005851,41.4985868337072,30.9027826414983,30.8745530676733,36.053463972013,39.526354316753,36.2262166316633,45.5337476497956,39.4730627797933,47.5070758115939,34.2197054851824,45.4589482740444,54.8739233773511,60.6958444798161,66.3954021126889,48.5819565108735,65.5905284847882,71.3764115715709,53.5711671044299,50.7836274463671,40.1157025290936,48.9833224999771,56.2709408275677,44.9120427393895,50.6308466634479,53.0533591480812,51.4027603772491,51.0355240189415,52.8278002860402,32.5462517561488,53.6230281921267,59.6937163195915,54.018497698399,54.692704938646,39.7387618621151,33.2248068657468,31.8146987485755,40.6106292151284,49.5436780058304,35.956401316481,47.0691706309456
|short_description=p1@Qk
|short_description=p1@Qk
}}
}}

Latest revision as of 22:46, 25 September 2015

Short description:p1@Qk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Qk_5end
Coexpression cluster:MCL_coexpression_mm9:2190
Association with transcript: 0bp_to_ENSMUST00000042296, ENSMUST00000042434, ENSMUST00000097414, ENSMUST00000115697, NM_001159516, NM_001159517, NM_021881, uc008akb.2, uc008akc.2, uc008ake.2, uc012ajv.1_5end
EntrezGene:Qk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Qk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G750.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E735.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.81
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H331.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C280.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B837.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C352.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C440.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C473.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C347.95
Mouse Granule cells, donor2.CNhs12357.11731-123E341.79
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C737.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D230.55
Mouse Microglia, donor1.CNhs12629.11718-123C888.98
Mouse Microglia, donor2.CNhs12634.11736-123E8106.43
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D558.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.43
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1146.25
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5117.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F267.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3121.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3195.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7204.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4156.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5113.68
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6174.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6128.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6141.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E166.17
Mouse Schwann, donor1.CNhs12507.11728-123D988.07
Mouse Schwann, donor2.CNhs12573.11746-123F994.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6130.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H146.20
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D726.87
adrenal gland, embryo E14.CNhs11038.406-44C519.43
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F522.31
adrenal gland, neonate N00.CNhs11191.1311-23C126.58
adrenal gland, neonate N25.CNhs11223.1377-27I332.55
amnion, adult pregnant day17.5.CNhs10488.583-22A822.49
aorta, adult.CNhs10498.46-23H149.89
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F555.16
bone (os femoris), neonate N16.CNhs11225.1525-43A648.81
bone (os femoris), neonate N20.CNhs11195.1350-25C335.40
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B260.31
cerebellum, neonate N30.CNhs11135.1395-42I282.73
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.62
corpora quadrigemina, adult.CNhs10501.16-22A494.82
corpus striatum, adult.CNhs10487.19-21D875.95
corpus striatum, neonate N00.CNhs11226.630-43F147.12
cortex, adult.CNhs10473.12-14D569.18
cortex, neonate N30.CNhs11107.1392-42F281.57
diencephalon, adult.CNhs10482.20-12F294.96
diencephalon, neonate N30.CNhs11201.1388-42B2119.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.38
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G421.04
eyeball, embryo E12.CNhs11016.345-16C632.27
eyeball, embryo E14.CNhs10521.399-16E232.42
eyeball, embryo E15.CNhs10593.426-16C930.79
eyeball, embryo E17.CNhs11023.1261-18D435.87
eyeball, neonate N00.CNhs11207.633-15C647.83
eyeball, neonate N01.CNhs11140.1532-43E733.95
eyeball, neonate N02.CNhs11205.1551-44G844.04
eyeball, neonate N16.CNhs11188.777-19A224.32
forelimb, embryo E11.CNhs10596.335-25E232.12
forelimb, embryo E12.CNhs10600.359-14H238.20
forelimb, embryo E13.CNhs10589.384-1E230.97
forelimb, embryo E14.CNhs10577.413-26A824.77
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C437.61
forelimb, embryo E18.CNhs11008.1520-43B523.46
gonad, embryo E13.CNhs11044.1564-45I635.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.77
heart, embryo E11.CNhs10586.331-24E959.86
heart, embryo E12.CNhs11015.353-12F557.22
heart, embryo E13.CNhs11013.376-3I958.16
heart, embryo E14.CNhs10597.403-26D468.66
heart, embryo E15.CNhs11017.431-16C880.67
heart, embryo E16.CNhs11021.457-17C689.47
heart, embryo E17.CNhs11025.479-18E598.83
heart, embryo E18.CNhs11030.1283-20G394.16
heart, neonate N00.CNhs11213.639-21E3100.65
heart, neonate N03.CNhs11221.1349-25I2109.60
heart, neonate N10.CNhs11118.749-24G190.62
heart, neonate N16.CNhs11209.782-15G1105.55
heart, neonate N20.CNhs11127.821-26I6114.18
heart, neonate N25.CNhs11196.1351-25D381.89
heart, neonate N30.CNhs11202.1390-42D283.34
hippocampus, adult.CNhs10478.13-16E870.24
hippocampus, neonate N00.CNhs11228.627-43G156.91
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I524.31
intestine, embryo E13.CNhs11010.381-16D527.40
intestine, embryo E15.CNhs10602.976-16D818.04
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E97.91
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I919.35
kidney, embryo E15.CNhs10997.434-16F831.53
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I228.71
kidney, embryo E18.CNhs11001.1288-20C729.09
kidney, neonate N00.CNhs11214.646-21G736.40
kidney, neonate N10.CNhs11206.758-6D526.24
kidney, neonate N20.CNhs11113.832-19I125.54
kidney, neonate N25.CNhs11122.1353-25F319.31
kidney, neonate N30.CNhs11203.1385-42H115.05
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F819.35
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E114.62
liver, embryo E15.CNhs10520.433-16D717.85
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A316.55
liver, embryo E18.CNhs10579.499-43G421.00
liver, neonate N00.CNhs11117.641-24F417.67
liver, neonate N03.CNhs11123.1345-25G212.63
liver, neonate N06.CNhs11101.684-20A863.26
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A312.88
liver, neonate N25.CNhs11198.1368-26H111.66
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B160.23
lung, embryo E12.CNhs10522.354-16G232.02
lung, embryo E14.CNhs10604.404-26F838.13
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B634.50
lung, embryo E17.CNhs10605.480-44A656.45
lung, embryo E18.CNhs10583.1287-20I658.08
lung, neonate N00.CNhs11224.640-42C683.13
lung, neonate N06.CNhs11212.683-20E548.87
lung, neonate N07.CNhs11111.715-19A353.15
lung, neonate N10.CNhs11219.750-23E677.50
lung, neonate N20.CNhs11109.822-18A460.30
lung, neonate N25.CNhs11119.1359-25C771.32
lung, neonate N30.CNhs11133.1394-42H270.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A149.76
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C2123.62
medulla oblongata, neonate N30.CNhs11200.1396-42A3181.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C258.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E142.59
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.41
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E353.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D760.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D876.64
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D988.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D541.50
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D647.83
olfactory brain, adult.CNhs10489.18-22I975.19
ovary, adult.CNhs10507.91-2I723.56
ovary, embryo E18.CNhs11040.505-44H721.19
ovary, neonate N00.CNhs11217.1299-22I437.63
oviduct, adult pregnant day01.CNhs10500.988-6G620.79
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F218.44
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I715.06
pancreas, neonate N00.CNhs11105.645-26G919.90
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E633.85
pituitary gland, embryo E13.CNhs11009.370-44C719.79
pituitary gland, embryo E14.CNhs11037.398-44A525.08
pituitary gland, embryo E15.CNhs10592.427-16B924.47
pituitary gland, embryo E16.CNhs11036.449-43F624.44
pituitary gland, embryo E17.CNhs11039.1265-44F525.67
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G335.16
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C332.98
skin, neonate N00.CNhs11124.650-25G430.03
skin, neonate N03.CNhs11215.662-22H337.82
skin, neonate N06.CNhs11097.693-20I525.31
skin, neonate N10.CNhs11108.762-6C424.62
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C9196.74
spleen, adult.CNhs10465.25-2G218.97
spleen, embryo E16.CNhs11035.461-43C127.45
spleen, embryo E18.CNhs11011.1271-21F223.70
spleen, neonate N10.CNhs11116.752-24D123.36
spleen, neonate N20.CNhs11112.824-19H124.60
spleen, neonate N25.CNhs11099.1354-25G318.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.53
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E326.26
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D416.42
stomach, embryo E17.CNhs11006.1035-18D517.56
stomach, embryo E18.CNhs10999.1286-20C613.10
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A917.11
stomach, neonate N25.CNhs11104.1355-25E410.73
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F554.87
testis, embryo E15.CNhs11034.443-27C533.09
testis, embryo E16.CNhs11033.470-26G544.53
testis, embryo E17.CNhs11029.486-18I540.69
testis, embryo E18.CNhs11027.503-18G543.93
testis, neonate N00.CNhs11189.1300-22B759.85
testis, neonate N07.CNhs11222.726-26I462.50
testis, neonate N10.CNhs11204.763-44D949.70
testis, neonate N20.CNhs11110.839-18H332.37
testis, neonate N30.CNhs11130.1391-42E228.80
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C513.25
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F813.22
thymus, neonate N03.CNhs11137.2104-43C711.67
thymus, neonate N06.CNhs11197.681-26C412.42
thymus, neonate N07.CNhs11211.713-19D313.56
thymus, neonate N10.CNhs11194.748-24E412.80
thymus, neonate N20.CNhs11186.820-7A212.77
thymus, neonate N25.CNhs11125.1362-25G713.66
thymus, neonate N30.CNhs11132.1393-42G210.75
tongue, adult.CNhs10499.32-1B441.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F724.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.26
urinary bladder, adult.CNhs10481.879-12E417.19
uterus, adult pregnant day19.CNhs10497.590-15F520.08
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D517.58
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A186.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A269.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A378.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A462.34
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A562.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A949.70
whole body, embryo E11.CNhs11014.324-5I853.45
whole body, embryo E12.CNhs10587.857-27C941.50
whole body, embryo E13.CNhs10512.372-23H230.90
whole body, embryo E14.5.CNhs10578.420-27D230.87
whole body, embryo E14.CNhs10519.395-14B136.05
whole body, embryo E16.CNhs10514.453-14F239.53
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G536.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.47
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G547.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G545.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G554.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G560.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G566.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G548.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G565.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G571.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.57
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G550.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G556.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G544.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G550.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G553.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G551.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G551.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G552.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G553.62
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G559.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G554.02
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G554.69
whole body, embryo E17.5.CNhs10513.490-9F939.74
whole body, embryo E17.CNhs10517.475-3I533.22
whole body, embryo E18.CNhs10516.493-3B331.81
whole body, neonate N00.CNhs10525.657-19C240.61
whole body, neonate N01.CNhs10576.659-23C649.54
whole body, neonate N06.CNhs10515.692-21D135.96
whole body, neonate N10.CNhs10518.761-6B447.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell7.03e-1444
neurectodermal cell7.03e-1444
neural cell2.95e-1343
neuron2.02e-1033
neuronal stem cell2.02e-1033
neuroblast2.02e-1033
electrically signaling cell2.02e-1033
CNS neuron (sensu Vertebrata)1.47e-0823
neuroblast (sensu Vertebrata)1.47e-0823
electrically responsive cell3.56e-0839
electrically active cell3.56e-0839

Uber anatomy
Ontology termp-valuen
nervous system5.21e-2175
central nervous system7.79e-2073
structure with developmental contribution from neural crest1.01e-1892
ectoderm-derived structure3.28e-1895
ectoderm3.28e-1895
presumptive ectoderm3.28e-1895
regional part of nervous system2.37e-1454
neural tube3.98e-1352
neural rod3.98e-1352
future spinal cord3.98e-1352
neural keel3.98e-1352
neurectoderm6.62e-1364
neural plate6.62e-1364
presumptive neural plate6.62e-1364
tube2.93e-12114
gray matter4.80e-1234
ecto-epithelium5.49e-1273
anatomical conduit3.97e-11122
brain2.81e-1047
future brain2.81e-1047
regional part of brain7.35e-1046
brain grey matter3.08e-0929
regional part of telencephalon3.08e-0929
telencephalon3.08e-0929
anterior neural tube6.19e-0840
pre-chordal neural plate1.36e-0749
regional part of forebrain1.80e-0739
forebrain1.80e-0739
future forebrain1.80e-0739
primary circulatory organ3.94e-0718
heart3.94e-0718
primitive heart tube3.94e-0718
primary heart field3.94e-0718
anterior lateral plate mesoderm3.94e-0718
heart tube3.94e-0718
heart primordium3.94e-0718
cardiac mesoderm3.94e-0718
cardiogenic plate3.94e-0718
heart rudiment3.94e-0718
posterior neural tube7.73e-0712
chordal neural plate7.73e-0712
cerebral cortex8.42e-0721
cerebral hemisphere8.42e-0721
pallium8.42e-0721
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