FFCP PHASE1:Hg19::chr11:111781610..111781617,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1410 | |EntrezGene=1410 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2389 | |HGNC=2389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000525823_5end | |association_with_transcript=0bp_to_ENST00000525823_5end | ||
|cluster_id=chr11:111781610..111781617,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_25_at_CRYAB_5end | |description=CAGE_peak_25_at_CRYAB_5end | ||
|id=chr11:111781610..111781617,- | |id=chr11:111781610..111781617,- | ||
|ontology_enrichment_celltype=CL:0000136!6.31e-07!15 | |ontology_enrichment_celltype=CL:0000136!6.31e-07!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.93e-16;1!UBERON:0010227;9.28e-16;1!UBERON:0000358;1.44e-15;1!UBERON:0005062;2.47e-15;4!UBERON:0007284;2.47e-15;4!UBERON:0010226;2.56e-15;1!UBERON:0005754;2.56e-15;1!UBERON:0007297;2.57e-08;2 | |||
|ontology_enrichment_disease=DOID:114!1.04e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.24e-29;2!DOID:178;1.44e-15;1!DOID:326;1.44e-15;1!DOID:3978;1.44e-15;1!DOID:3394;1.44e-15;1!DOID:5844;1.44e-15;1!DOID:1287;2.39e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.24e-29,2;DOID:178,1.54e-15,1;DOID:326,1.54e-15,1;DOID:3978,1.54e-15,1;DOID:3394,1.54e-15,1;DOID:5844,1.54e-15,1;DOID:1287,2.39e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-38!115;UBERON:0001049!3.44e-18!57;UBERON:0005068!3.44e-18!57;UBERON:0006241!3.44e-18!57;UBERON:0007135!3.44e-18!57;UBERON:0003075!4.12e-17!86;UBERON:0007284!4.12e-17!86;UBERON:0002346!4.72e-16!90;UBERON:0002616!8.14e-14!59;UBERON:0005743!2.10e-12!86;UBERON:0001017!5.32e-12!82;UBERON:0002780!1.52e-11!41;UBERON:0001890!1.52e-11!41;UBERON:0006240!1.52e-11!41;UBERON:0003103!2.30e-11!69;UBERON:0003080!3.40e-11!42;UBERON:0000955!6.42e-11!69;UBERON:0006238!6.42e-11!69;UBERON:0000073!1.04e-10!94;UBERON:0001016!1.04e-10!94;UBERON:0001893!1.20e-10!34;UBERON:0003978!1.48e-10!3;UBERON:0009751!1.48e-10!3;UBERON:0000946!1.48e-10!3;UBERON:0002523!1.48e-10!3;UBERON:0005983!1.48e-10!3;UBERON:0002165!1.48e-10!3;UBERON:0002062!1.48e-10!3;UBERON:0007280!1.48e-10!3;UBERON:0004151!1.68e-10!3;UBERON:0009663!2.99e-10!7;UBERON:0006947!3.73e-10!3;UBERON:0004054!3.73e-10!3;UBERON:0002791!2.23e-09!33;UBERON:0003076!7.96e-09!15;UBERON:0003057!7.96e-09!15;UBERON:0007100!3.18e-08!27;UBERON:0001869!5.99e-08!32;UBERON:0002308!6.80e-08!9;UBERON:0002420!6.80e-08!9;UBERON:0000125!6.80e-08!9;UBERON:0007245!6.80e-08!9;UBERON:0010009!6.80e-08!9;UBERON:0010011!6.80e-08!9;UBERON:0000454!6.80e-08!9;UBERON:0003056!8.06e-08!61;UBERON:0005904!1.06e-07!4;UBERON:0002081!1.57e-07!2;UBERON:0002133!1.62e-07!2;UBERON:0002020!1.67e-07!34;UBERON:0003528!1.67e-07!34;UBERON:0001875!3.95e-07!2;UBERON:0006514!3.95e-07!2;UBERON:0004121!7.55e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.28e-36;25!UBERON:0003978;4.22e-20;3!UBERON:0000946;4.22e-20;3!UBERON:0004151;7.16e-20;3!UBERON:0000948;2.84e-16;22!UBERON:0002079;9.28e-16;1!UBERON:0002146;9.28e-16;1!UBERON:0005623;9.28e-16;1!UBERON:0002135;1.15e-15;1!UBERON:0002084;2.56e-15;1!UBERON:0000998;2.56e-15;1!UBERON:0007195;2.56e-15;1!UBERON:0006868;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0003103;6.48e-09;61!UBERON:0002081;1.55e-08;2!UBERON:0002133;1.73e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.89e-33,27;UBERON:0003978,4.02e-20,3;UBERON:0009751,4.02e-20,3;UBERON:0000946,4.02e-20,3;UBERON:0002523,4.02e-20,3;UBERON:0005983,4.02e-20,3;UBERON:0002165,4.02e-20,3;UBERON:0002062,4.02e-20,3;UBERON:0007280,4.02e-20,3;UBERON:0003103,5.65e-20,68;UBERON:0004151,5.91e-20,3;UBERON:0002146,8.63e-16,1;UBERON:0005623,8.63e-16,1;UBERON:0002079,9.99e-16,1;UBERON:0002135,1.16e-15,1;UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1;UBERON:0000998,2.06e-15,1;UBERON:0006868,2.06e-15,1;UBERON:0007195,3.66e-15,1;UBERON:0000948,6.04e-15,24;UBERON:0005498,6.04e-15,24;UBERON:0004140,6.04e-15,24;UBERON:0009881,6.04e-15,24;UBERON:0004141,6.04e-15,24;UBERON:0003084,6.04e-15,24;UBERON:0007005,6.04e-15,24;UBERON:0004139,6.04e-15,24;UBERON:0004291,6.04e-15,24;UBERON:0007023,1.84e-11,114;UBERON:0004797,3.58e-09,7;UBERON:0002081,1.61e-08,2;UBERON:0010227,1.61e-08,2;UBERON:0002133,1.73e-08,2;UBERON:0001009,1.71e-07,112 | |||
|phase1_expression=0.726713517082227,0,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.221158519862449,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,3.35138881526705,4.58320848023367,0.717873024576814,2.1964690054889,6.43839072204856,9.15002975511677,6.31524641375227,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,4.2881719582402,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,1.38251932362818,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0.4226557275834,0.169927114687817,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0.726713517082227,0,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.221158519862449,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,3.35138881526705,4.58320848023367,0.717873024576814,2.1964690054889,6.43839072204856,9.15002975511677,6.31524641375227,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,4.2881719582402,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,1.38251932362818,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0.4226557275834,0.169927114687817,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p25@CRYAB | |short_description=p25@CRYAB | ||
}} | }} |
Latest revision as of 03:51, 25 September 2015
Short description: | p25@CRYAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CRYAB_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000525823_5end |
EntrezGene: | CRYAB |
HGNC: | 2389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.89e-33 | 27 |
valve | 4.02e-20 | 3 |
cardiac mesenchyme | 4.02e-20 | 3 |
cardial valve | 4.02e-20 | 3 |
tunica intima | 4.02e-20 | 3 |
heart layer | 4.02e-20 | 3 |
endocardium | 4.02e-20 | 3 |
endocardial cushion | 4.02e-20 | 3 |
presumptive endocardium | 4.02e-20 | 3 |
compound organ | 5.65e-20 | 68 |
cardiac chamber | 5.91e-20 | 3 |
pulmonary valve | 8.63e-16 | 1 |
semi-lunar valve | 8.63e-16 | 1 |
left cardiac atrium | 9.99e-16 | 1 |
mitral valve | 1.16e-15 | 1 |
heart left ventricle | 1.78e-15 | 1 |
cardiac ventricle | 1.78e-15 | 1 |
future cardiac ventricle | 1.78e-15 | 1 |
seminal vesicle | 2.06e-15 | 1 |
seminal fluid secreting gland | 2.06e-15 | 1 |
stroma of bone marrow | 3.66e-15 | 1 |
heart | 6.04e-15 | 24 |
primitive heart tube | 6.04e-15 | 24 |
primary heart field | 6.04e-15 | 24 |
anterior lateral plate mesoderm | 6.04e-15 | 24 |
heart tube | 6.04e-15 | 24 |
heart primordium | 6.04e-15 | 24 |
cardiac mesoderm | 6.04e-15 | 24 |
cardiogenic plate | 6.04e-15 | 24 |
heart rudiment | 6.04e-15 | 24 |
adult organism | 1.84e-11 | 114 |
blood vessel layer | 3.58e-09 | 7 |
cardiac atrium | 1.61e-08 | 2 |
future cardiac atrium | 1.61e-08 | 2 |
atrioventricular valve | 1.73e-08 | 2 |
circulatory system | 1.71e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.24e-29 | 2 |
vascular disease | 1.54e-15 | 1 |
ischemia | 1.54e-15 | 1 |
extrinsic cardiomyopathy | 1.54e-15 | 1 |
myocardial ischemia | 1.54e-15 | 1 |
myocardial infarction | 1.54e-15 | 1 |
cardiovascular system disease | 2.39e-15 | 4 |