FFCP PHASE1:Mm9::chr16:8470856..8470900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239706 | |EntrezGene=239706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=528 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R1C6,D3Z0D7,D3YVA4 | |UniProt=Q8R1C6,D3Z0D7,D3YVA4 | ||
|association_with_transcript=0bp_to_ENSMUST00000046470,ENSMUST00000142899,ENSMUST00000150790_5end | |association_with_transcript=0bp_to_ENSMUST00000046470,ENSMUST00000142899,ENSMUST00000150790_5end | ||
|cluster_id=chr16:8470856..8470900,+ | |||
|description=CAGE_peak_1_at_Mettl22_5end | |description=CAGE_peak_1_at_Mettl22_5end | ||
|id=chr16:8470856..8470900,+ | |id=chr16:8470856..8470900,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.03e-09!23;CL:0000337!4.03e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-09,23;CL:0000337,4.03e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.25e-12!34;UBERON:0001017!6.36e-12!73;UBERON:0005743!6.36e-12!73;UBERON:0004121!2.24e-11!102;UBERON:0000924!2.24e-11!102;UBERON:0006601!2.24e-11!102;UBERON:0000073!2.37e-11!75;UBERON:0001016!2.37e-11!75;UBERON:0002346!3.67e-11!71;UBERON:0003075!3.67e-11!71;UBERON:0007284!3.67e-11!71;UBERON:0001049!3.94e-11!52;UBERON:0005068!3.94e-11!52;UBERON:0006241!3.94e-11!52;UBERON:0007135!3.94e-11!52;UBERON:0000033!1.66e-10!63;UBERON:0002791!3.59e-10!29;UBERON:0003528!3.59e-10!29;UBERON:0001893!3.59e-10!29;UBERON:0000955!8.84e-10!50;UBERON:0006238!8.84e-10!50;UBERON:0002616!1.32e-09!49;UBERON:0000025!4.16e-08!114;UBERON:0003056!5.23e-08!49;UBERON:0004111!1.88e-07!122;UBERON:0003080!2.06e-07!40;UBERON:0002780!5.67e-07!39;UBERON:0001890!5.67e-07!39;UBERON:0006240!5.67e-07!39;UBERON:0007811!7.07e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.47e-16,92;UBERON:0002020,2.25e-12,34;UBERON:0001017,6.35e-12,73;UBERON:0000073,1.16e-11,54;UBERON:0001016,2.37e-11,75;UBERON:0002346,3.17e-11,64;UBERON:0003075,3.17e-11,64;UBERON:0007284,3.17e-11,64;UBERON:0004121,3.33e-11,95;UBERON:0000924,3.33e-11,95;UBERON:0006601,3.33e-11,95;UBERON:0001049,3.94e-11,52;UBERON:0005068,3.94e-11,52;UBERON:0006241,3.94e-11,52;UBERON:0007135,3.94e-11,52;UBERON:0003528,3.58e-10,29;UBERON:0002791,3.58e-10,29;UBERON:0001893,3.58e-10,29;UBERON:0010371,5.16e-10,73;UBERON:0000955,8.10e-09,47;UBERON:0006238,8.10e-09,47;UBERON:0002616,1.20e-08,46;UBERON:0000025,4.16e-08,114;UBERON:0003056,5.23e-08,49;UBERON:0004111,1.88e-07,122;UBERON:0003080,2.06e-07,40;UBERON:0002780,5.67e-07,39;UBERON:0001890,5.67e-07,39;UBERON:0006240,5.67e-07,39 | |||
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| ||
|short_description=p1@Mettl22 | |short_description=p1@Mettl22 | ||
}} | }} |
Latest revision as of 18:52, 25 September 2015
Short description: | p1@Mettl22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mettl22_5end |
Coexpression cluster: | MCL_coexpression_mm9:528 |
Association with transcript: | 0bp_to_ENSMUST00000046470, ENSMUST00000142899, ENSMUST00000150790_5end |
EntrezGene: | Mettl22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.47e-16 | 92 |
gray matter | 2.25e-12 | 34 |
central nervous system | 6.35e-12 | 73 |
regional part of nervous system | 1.16e-11 | 54 |
nervous system | 2.37e-11 | 75 |
neurectoderm | 3.17e-11 | 64 |
neural plate | 3.17e-11 | 64 |
presumptive neural plate | 3.17e-11 | 64 |
ectoderm-derived structure | 3.33e-11 | 95 |
ectoderm | 3.33e-11 | 95 |
presumptive ectoderm | 3.33e-11 | 95 |
neural tube | 3.94e-11 | 52 |
neural rod | 3.94e-11 | 52 |
future spinal cord | 3.94e-11 | 52 |
neural keel | 3.94e-11 | 52 |
brain grey matter | 3.58e-10 | 29 |
regional part of telencephalon | 3.58e-10 | 29 |
telencephalon | 3.58e-10 | 29 |
ecto-epithelium | 5.16e-10 | 73 |
brain | 8.10e-09 | 47 |
future brain | 8.10e-09 | 47 |
regional part of brain | 1.20e-08 | 46 |
tube | 4.16e-08 | 114 |
pre-chordal neural plate | 5.23e-08 | 49 |
anatomical conduit | 1.88e-07 | 122 |
anterior neural tube | 2.06e-07 | 40 |
regional part of forebrain | 5.67e-07 | 39 |
forebrain | 5.67e-07 | 39 |
future forebrain | 5.67e-07 | 39 |