FFCP PHASE1:Hg19::chr11:105115401..105115429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:105115401..105115429,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:105115401..105115429,+ | |description=CAGE_peak_at_chr11:105115401..105115429,+ | ||
|id=chr11:105115401..105115429,+ | |id=chr11:105115401..105115429,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.78e-81!42;CL:0000860!1.08e-78!45;CL:0002194!7.27e-55!63;CL:0000576!7.27e-55!63;CL:0000040!7.27e-55!63;CL:0000559!7.27e-55!63;CL:0002009!7.69e-53!65;CL:0000766!6.91e-52!76;CL:0000839!2.80e-48!70;CL:0000557!1.91e-47!71;CL:0000738!7.08e-40!140;CL:0002087!4.30e-37!119;CL:0000763!5.29e-33!112;CL:0000049!5.29e-33!112;CL:0000037!3.77e-31!172;CL:0000566!3.77e-31!172;CL:0002031!9.10e-30!124;CL:0000988!1.22e-28!182;CL:0002032!1.87e-24!165;CL:0000837!1.87e-24!165;CL:0002393!1.33e-17!9;CL:0002397!1.33e-17!9;CL:0000134!2.77e-16!358;CL:0002320!1.18e-15!365;CL:0000048!3.50e-14!430;CL:0000034!5.43e-14!444;CL:0000723!9.49e-14!436;CL:0000219!1.91e-13!390;CL:0000767!3.01e-09!3;CL:0000842!1.05e-08!3;CL:0000784!2.82e-08!3;CL:0000063!3.32e-08!578;CL:0000623!5.89e-08!3;CL:0000825!5.89e-08!3;CL:0002371!1.42e-07!591;CL:0000144!2.71e-07!625 | |ontology_enrichment_celltype=CL:0002057!4.78e-81!42;CL:0000860!1.08e-78!45;CL:0002194!7.27e-55!63;CL:0000576!7.27e-55!63;CL:0000040!7.27e-55!63;CL:0000559!7.27e-55!63;CL:0002009!7.69e-53!65;CL:0000766!6.91e-52!76;CL:0000839!2.80e-48!70;CL:0000557!1.91e-47!71;CL:0000738!7.08e-40!140;CL:0002087!4.30e-37!119;CL:0000763!5.29e-33!112;CL:0000049!5.29e-33!112;CL:0000037!3.77e-31!172;CL:0000566!3.77e-31!172;CL:0002031!9.10e-30!124;CL:0000988!1.22e-28!182;CL:0002032!1.87e-24!165;CL:0000837!1.87e-24!165;CL:0002393!1.33e-17!9;CL:0002397!1.33e-17!9;CL:0000134!2.77e-16!358;CL:0002320!1.18e-15!365;CL:0000048!3.50e-14!430;CL:0000034!5.43e-14!444;CL:0000723!9.49e-14!436;CL:0000219!1.91e-13!390;CL:0000767!3.01e-09!3;CL:0000842!1.05e-08!3;CL:0000784!2.82e-08!3;CL:0000063!3.32e-08!578;CL:0000623!5.89e-08!3;CL:0000825!5.89e-08!3;CL:0002371!1.42e-07!591;CL:0000144!2.71e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.79e-67;33!CL:0002057;1.79e-67;33!CL:0000576;4.78e-48;48!CL:0000473;8.09e-47;39!CL:0000234;8.09e-47;39!CL:0000766;2.91e-33;69!CL:0002393;4.01e-32;6!CL:0002397;4.01e-32;6!CL:0000767;1.85e-17;3!CL:0002087;1.43e-16;104!CL:0000226;2.05e-16;3!CL:0000842;2.05e-16;3!CL:0000763;1.95e-13;100!CL:0000738;3.00e-09;136!CL:0000988;1.00e-07;177!CL:0000784;1.21e-07;3!CL:0000094;8.05e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-93,42;CL:0002057,1.76e-93,42;CL:0000473,4.48e-81,48;CL:0000234,4.48e-81,48;CL:0000766,1.27e-68,72;CL:0002194,1.72e-68,59;CL:0000576,1.72e-68,59;CL:0000040,1.72e-68,59;CL:0000559,1.72e-68,59;CL:0002009,4.32e-66,61;CL:0000839,1.03e-60,66;CL:0000557,9.80e-60,67;CL:0000738,1.59e-46,136;CL:0000763,6.94e-44,108;CL:0000049,6.94e-44,108;CL:0002087,2.35e-43,115;CL:0000037,1.82e-36,168;CL:0000988,2.76e-34,177;CL:0002031,2.42e-33,120;CL:0002032,1.92e-29,161;CL:0000837,1.92e-29,161;CL:0002393,3.30e-21,9;CL:0002397,3.30e-21,9;CL:0000767,1.85e-17,3;CL:0000226,2.46e-16,3;CL:0000842,2.46e-16,3;CL:0000134,8.47e-14,354;CL:0002320,2.13e-13,361;CL:0000219,5.54e-12,386;CL:0000034,1.22e-10,441;CL:0000048,3.00e-10,427;CL:0000723,5.21e-10,433;CL:0000784,1.30e-07,3;CL:0000094,8.06e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-65;42!CL:0000049;3.33e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.31e-43!80;UBERON:0001474!2.73e-39!86;UBERON:0002390!2.86e-37!102;UBERON:0003061!2.86e-37!102;UBERON:0002193!1.31e-34!112;UBERON:0004765!9.21e-32!101;UBERON:0001434!9.21e-32!101;UBERON:0002405!4.60e-28!115;UBERON:0002204!7.49e-19!167;UBERON:0003081!2.26e-16!216;UBERON:0002384!8.47e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.67e-52,76;UBERON:0002390,1.36e-48,98;UBERON:0003061,1.36e-48,98;UBERON:0001474,7.32e-48,82;UBERON:0002193,1.48e-43,108;UBERON:0004765,3.97e-43,90;UBERON:0002405,1.47e-41,93;UBERON:0001434,2.91e-38,100;UBERON:0002204,1.37e-20,167;UBERON:0003081,2.69e-20,203;UBERON:0002384,7.53e-13,371;UBERON:0000926,8.48e-11,315;UBERON:0004120,8.48e-11,315;UBERON:0006603,8.48e-11,315 | |||
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|short_description=p@chr11:105115401..105115429,+ | |short_description=p@chr11:105115401..105115429,+ | ||
}} | }} |
Latest revision as of 17:42, 23 July 2015
Short description: | p@chr11:105115401..105115429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:105115401..105115429, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.67e-52 | 76 |
hematopoietic system | 1.36e-48 | 98 |
blood island | 1.36e-48 | 98 |
bone element | 7.32e-48 | 82 |
hemolymphoid system | 1.48e-43 | 108 |
skeletal element | 3.97e-43 | 90 |
immune system | 1.47e-41 | 93 |
skeletal system | 2.91e-38 | 100 |
musculoskeletal system | 1.37e-20 | 167 |
lateral plate mesoderm | 2.69e-20 | 203 |
connective tissue | 7.53e-13 | 371 |
mesoderm | 8.48e-11 | 315 |
mesoderm-derived structure | 8.48e-11 | 315 |
presumptive mesoderm | 8.48e-11 | 315 |