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FFCP PHASE1:Mm9::chr16:38089447..38089481,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56637
|EntrezGene=56637
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9WV60,Q5KU03
|UniProt=Q9WV60,Q5KU03
|association_with_transcript=360bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|association_with_transcript=360bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|cluster_id=chr16:38089447..38089481,+
|description=CAGE_peak_2_at_Gsk3b_5end
|description=CAGE_peak_2_at_Gsk3b_5end
|id=chr16:38089447..38089481,+
|id=chr16:38089447..38089481,+
|ontology_enrichment_celltype=CL:0000117!9.61e-07!23;CL:0000337!9.61e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.61e-07,23;CL:0000337,9.61e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.67e-11!63;UBERON:0000955!4.54e-10!50;UBERON:0006238!4.54e-10!50;UBERON:0002020!1.28e-09!34;UBERON:0002616!1.34e-09!49;UBERON:0001049!2.44e-09!52;UBERON:0005068!2.44e-09!52;UBERON:0006241!2.44e-09!52;UBERON:0007135!2.44e-09!52;UBERON:0003056!3.63e-09!49;UBERON:0002791!4.23e-09!29;UBERON:0003528!4.23e-09!29;UBERON:0001893!4.23e-09!29;UBERON:0004121!2.97e-08!102;UBERON:0000924!2.97e-08!102;UBERON:0006601!2.97e-08!102;UBERON:0003080!6.83e-08!40;UBERON:0007811!8.73e-08!86;UBERON:0002346!1.04e-07!71;UBERON:0003075!1.04e-07!71;UBERON:0007284!1.04e-07!71;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0002021!1.49e-07!10;UBERON:0000411!1.49e-07!10;UBERON:0001950!1.49e-07!10;UBERON:0001017!1.98e-07!73;UBERON:0005743!1.98e-07!73;UBERON:0002780!2.04e-07!39;UBERON:0001890!2.04e-07!39;UBERON:0006240!2.04e-07!39;UBERON:0000073!2.35e-07!75;UBERON:0001016!2.35e-07!75;UBERON:0000153!8.53e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.76e-10,54;UBERON:0004121,7.56e-10,95;UBERON:0000924,7.56e-10,95;UBERON:0006601,7.56e-10,95;UBERON:0002346,1.10e-09,64;UBERON:0003075,1.10e-09,64;UBERON:0007284,1.10e-09,64;UBERON:0002020,1.28e-09,34;UBERON:0010371,1.81e-09,73;UBERON:0001049,2.41e-09,52;UBERON:0005068,2.41e-09,52;UBERON:0006241,2.41e-09,52;UBERON:0007135,2.41e-09,52;UBERON:0003056,3.63e-09,49;UBERON:0003528,4.23e-09,29;UBERON:0002791,4.23e-09,29;UBERON:0001893,4.23e-09,29;UBERON:0000955,1.38e-08,47;UBERON:0006238,1.38e-08,47;UBERON:0002616,3.87e-08,46;UBERON:0003080,6.83e-08,40;UBERON:0000956,1.06e-07,21;UBERON:0001869,1.06e-07,21;UBERON:0000203,1.06e-07,21;UBERON:0002021,1.49e-07,10;UBERON:0000411,1.49e-07,10;UBERON:0001950,1.49e-07,10;UBERON:0001017,1.97e-07,73;UBERON:0002780,2.04e-07,39;UBERON:0001890,2.04e-07,39;UBERON:0006240,2.04e-07,39;UBERON:0001016,2.34e-07,75
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6358368502,4.45052343069908,4.87655388779482,6.02038666563268,4.01806417204558,9.94142900939081,10.1464728963154,4.63501292736334,4.63283773279873,3.50012139019286,3.22899558694328,2.36538575687089,3.0512882047896,5.4685841634459,5.03324853243412,2.65742532908607,3.45636007509439,7.58426689507628,2.8381530140623,5.03283690107653,5.3267537420896,6.98204113103178,8.14593554603186,5.28859977887863,4.87375439676105,5.35122184725182,6.85861259894999,5.14213544197887,7.50425681696094,4.81059208201647,6.54510652216786,9.29594572822367,1.33191572024439,1.34570784914214,2.51826924546118,5.40930863290133,5.44279178808428,11.1722490803032,8.36036678408357,5.517293144389,25.9785847603851,22.5559365888517,19.4784474569395,11.3423100346834,45.2154463048624,37.0143009720953,38.4762825132129,28.8205570063501,31.7199686288943,34.1721805756201,11.1052461915069,11.1726964552289,6.65861062441123,7.05009479498053,7.33646069197938,7.16989682955055,8.00088220085815,9.06554251851134,7.38114182061175,7.32821914115013,7.60437899670719,7.9223063382152,7.02311306024118,6.53056554529667,8.38557846751954,6.19181798667996,5.44656331940821,5.98018583437486,6.1812885120496,6.32955356577908,8.57173130963539,6.03417740941747,5.96090474868302,6.68593516508711,5.08190654242785,4.73841804193388,8.59761472502031,6.57674278594607,4.88894809845102,6.73370725989286,5.93175090620871,6.59980031916275,6.54769669071503,5.73266312388074,7.33045121728337,5.24602213669686,5.38042699424439,3.86767897286937,5.92993829413414,5.07360263974886,7.88350641109433
|phase1_expression=2.7225304007815,15.7038933437712,16.3799726180233,26.3143863836942,30.5546395267272,8.2260843236826,8.41005506143892,1.54947988129892,2.111830832275,2.34064526321993,2.91070545983358,2.47293692885543,1.71200729931206,1.74840804837995,9.99329285446988,11.3386149738303,13.2916756844348,3.3123527362615,4.9361196098066,3.39511721438424,8.1641558545027,2.58156473122302,2.08959831311148,5.43974237497583,3.67054849707472,10.3361753540704,10.7690499039769,6.03319451520489,3.23039813075836,6.04872311423834,2.43903561720835,6.98533740805594,7.99584223859941,0,4.91047753577167,2.99222361645286,5.3084032628216,6.69650609179052,3.906676722619,7.85285615960697,5.29408339227913,5.46436387966757,6.79714494243615,2.14024590558481,1.82478476195126,4.22157529971868,0,3.05235218932625,3.07560655828261,1.94429899074283,1.81982348112971,0,5.5368259999053,3.62681071005672,7.39406358113421,5.40244815675489,2.86533439938757,4.64104883049698,11.1274053472779,10.5798195854407,4.43681982454325,1.35537812827653,0,0.449949858640699,0.988866362566974,2.8419204597844,1.49800055259202,0.768436610643109,9.64313394468842,9.04539786822327,9.25429829946081,6.85562362569129,7.50953039235486,10.534208732486,11.0222291670972,9.19218786610021,20.9220173898839,24.2605942361857,28.2636021191488,5.27545150920775,8.05091263701205,5.2091337055676,28.1974828991395,18.0084035210138,13.1406493088057,8.83885756421003,6.69146899755784,6.89677949553612,4.84647637332378,6.87701196971748,5.50742528533188,2.58127163094416,7.47968467078526,4.85732872474035,5.84798775702902,3.58421509677868,6.17955448579708,3.40860645156115,1.81850203222008,2.82671659608272,3.94361575374705,10.2661181931454,10.1922095882658,14.2213340630666,2.38140145112336,3.04031838570118,3.0331466700887,4.68153906848146,1.8125651855302,4.89859058913922,4.3371331691534,6.08930956624282,4.38169444786511,1.95939432718409,3.88042733547826,4.90099706185734,6.42706916109372,4.62717942143717,11.4999371753484,5.98537344805414,8.39197770149496,7.75800405016355,5.59175283654366,15.517382241612,7.95897485891129,6.64188343542338,3.71426885968353,3.59941638596045,3.68503658511888,23.8167116653668,57.1875753523283,5.40313714085317,41.7178368461464,37.0787413128979,22.0255327233134,20.4423991465375,4.78645010096487,9.95255764880744,13.1415834385511,9.6803253707778,6.37590170517248,6.43725892413724,9.00310649026746,5.27466862425003,6.87168641428411,8.45550553880009,8.24575176125614,8.79591460512653,7.76044774558232,6.99692496620931,5.27853372491847,4.60311038097907,2.78047249225598,6.96504333044333,4.32142486456681,3.98068533636986,4.91549231119264,3.60287069960601,3.6941254921427,5.59239585845855,4.22146907965973,3.6012412292203,4.26140524053378,4.32881309844288,2.31400669331067,3.72054311600653,3.48755421819505,3.61972561338225,2.30383789878873,2.95501435342371,2.83740833410495,2.19299981137998,2.85415149878366,2.41571553768669,21.449574753541,4.83651678182637,14.2080076683033,14.2803305998314,4.05247676016945,3.48355007790658,7.7320476793256,6.45387278794696,7.78323153457046,8.56015317506516,6.16887780007865,6.58795818896044,5.02670417600539,3.58121649674071,3.31438948102504,5.39291645192533,7.99710784536369,5.77509692437665,4.74169752382704,6.51216521875454,9.01661885384643,6.10953983535943,5.04276466635827,4.27828501330943,3.16182685621286,4.28069429140846,2.82597710114475,3.08492909804501,5.92905254174298,10.1775514486817,8.84515478009414,8.09503604585473,12.9830477688642,8.92355491083942,7.63877555344259,8.0554918486227,6.16113861745134,3.84385978463314,2.87536413054709,3.72140947668503,2.18426371180192,3.03094653536534,3.58794827043824,5.30687873499704,6.46636165583116,4.35830247072115,4.88894929326078,4.41337223015489,4.22442446919304,7.87279409976534,6.9032655856944,4.68320754858717,3.94087860265477,4.20782910332672,3.50800491046472,4.7520361267564,5.69860440157455,4.91806799177139,3.01582567878545,1.63171705145613,4.42587845717133,4.13905119457099,35.0000286173386,24.1456074379939,3.93443868904021,4.03953483526997,5.04813151066011,3.51394869866975,4.52389135238878,6.69112634267146,6.01556420022464,4.81230102341015,7.2865926301481,5.55286130031493,6.7198922250909,17.3513510867776,5.53566332312248,4.80777129901589,3.4206261464251,6.59880491890142,17.2568679841952,2.18502572539483,6.34879469625977,6.22396763194464,6.20133975049623,7.68587869859819,8.01127708821486,4.72593848320757,4.9909632973861,3.47640433729398,7.37930260024991,3.09406629744561,13.6175842301515,5.04171063287669,3.49268446213437,2.7863814554107,7.98031051390231,3.92411398724555,4.77192159746151,3.04464949114599,4.69343416127421,4.2366414172764,5.51320995137405,14.6748765117917,6.13564821444441,8.2025577902292,10.0272768962635,14.2802582778203,8.74442509889552,47.0980267106695,10.5939946094669,4.95328483111734,4.25947412950337,9.60679130723924,11.4823151285661,6.86334519619568,5.09935289981566,2.79902904647316,3.45499934511059,3.81868247206045,4.4287039101359,6.70954241518601,5.18425635944646,6.48173717644853,3.71216358368502,4.45052343069908,4.87655388779482,6.02038666563268,4.01806417204558,9.94142900939081,10.1464728963154,4.63501292736334,4.63283773279873,3.50012139019286,3.22899558694328,2.36538575687089,3.0512882047896,5.4685841634459,5.03324853243412,2.65742532908607,3.45636007509439,7.58426689507628,2.8381530140623,5.03283690107653,5.3267537420896,6.98204113103178,8.14593554603186,5.28859977887863,4.87375439676105,5.35122184725182,6.85861259894999,5.14213544197887,7.50425681696094,4.81059208201647,6.54510652216786,9.29594572822367,1.33191572024439,1.34570784914214,2.51826924546118,5.40930863290133,5.44279178808428,11.1722490803032,8.36036678408357,5.517293144389,25.9785847603851,22.5559365888517,19.4784474569395,11.3423100346834,45.2154463048624,37.0143009720953,38.4762825132129,28.8205570063501,31.7199686288943,34.1721805756201,11.1052461915069,11.1726964552289,6.65861062441123,7.05009479498053,7.33646069197938,7.16989682955055,8.00088220085815,9.06554251851134,7.38114182061175,7.32821914115013,7.60437899670719,7.9223063382152,7.02311306024118,6.53056554529667,8.38557846751954,6.19181798667996,5.44656331940821,5.98018583437486,6.1812885120496,6.32955356577908,8.57173130963539,6.03417740941747,5.96090474868302,6.68593516508711,5.08190654242785,4.73841804193388,8.59761472502031,6.57674278594607,4.88894809845102,6.73370725989286,5.93175090620871,6.59980031916275,6.54769669071503,5.73266312388074,7.33045121728337,5.24602213669686,5.38042699424439,3.86767897286937,5.92993829413414,5.07360263974886,7.88350641109433
|short_description=p2@Gsk3b
|short_description=p2@Gsk3b
}}
}}

Latest revision as of 23:47, 1 October 2015

Short description:p2@Gsk3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gsk3b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 360bp_to_ENSMUST00000023507, NM_019827, uc007zen.1_5end
EntrezGene:Gsk3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gsk3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D94.85
Mouse Schwann, donor2.CNhs12573.11746-123F96.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A423.82
corpus striatum, adult.CNhs10487.19-21D857.19
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D541.72
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F222.03
diencephalon, neonate N30.CNhs11201.1388-42B220.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.95
epididymis, adult.CNhs10490.58-23B213.14
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C66.38
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F86.51
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G74.28
kidney, neonate N10.CNhs11206.758-6D53.16
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F810.18
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C235.00
medulla oblongata, neonate N30.CNhs11200.1396-42A324.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H38.20
skin, neonate N06.CNhs11097.693-20I510.03
skin, neonate N10.CNhs11108.762-6C414.28
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C947.10
spleen, adult.CNhs10465.25-2G210.59
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H111.48
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F85.29
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G26.55
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A638.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I811.11
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.61e-0723
neuroblast (sensu Vertebrata)9.61e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.76e-1054
ectoderm-derived structure7.56e-1095
ectoderm7.56e-1095
presumptive ectoderm7.56e-1095
neurectoderm1.10e-0964
neural plate1.10e-0964
presumptive neural plate1.10e-0964
gray matter1.28e-0934
ecto-epithelium1.81e-0973
neural tube2.41e-0952
neural rod2.41e-0952
future spinal cord2.41e-0952
neural keel2.41e-0952
pre-chordal neural plate3.63e-0949
brain grey matter4.23e-0929
regional part of telencephalon4.23e-0929
telencephalon4.23e-0929
brain1.38e-0847
future brain1.38e-0847
regional part of brain3.87e-0846
anterior neural tube6.83e-0840
cerebral cortex1.06e-0721
cerebral hemisphere1.06e-0721
pallium1.06e-0721
occipital lobe1.49e-0710
visual cortex1.49e-0710
neocortex1.49e-0710
central nervous system1.97e-0773
regional part of forebrain2.04e-0739
forebrain2.04e-0739
future forebrain2.04e-0739
nervous system2.34e-0775
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