FFCP PHASE1:Hg19::chr10:99446948..99446963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60370 | |EntrezGene=60370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |HGNC=30898 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |UniProt=Q5T686 | ||
|association_with_transcript=51bp_to_NM_021732,uc001koi.2_5end | |association_with_transcript=51bp_to_NM_021732,uc001koi.2_5end | ||
|cluster_id=chr10:99446948..99446963,- | |||
|description=CAGE_peak_3_at_AVPI1_5end | |description=CAGE_peak_3_at_AVPI1_5end | ||
|id=chr10:99446948..99446963,- | |id=chr10:99446948..99446963,- | ||
|ontology_enrichment_celltype=CL:0000066!3.40e-13!254;CL:0002076!3.77e-07!43;CL:0000223!8.30e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.40e-13!254;CL:0002076!3.77e-07!43;CL:0000223!8.30e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.14e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-13!169;UBERON:0000925!5.16e-13!169;UBERON:0006595!5.16e-13!169;UBERON:0000062!2.57e-11!511;UBERON:0001007!2.75e-11!155;UBERON:0001555!2.75e-11!155;UBERON:0007026!2.75e-11!155;UBERON:0000077!3.49e-09!130;UBERON:0004921!7.01e-09!129;UBERON:0004185!7.01e-09!129;UBERON:0000468!1.02e-07!659;UBERON:0001737!2.43e-07!9;UBERON:0001004!7.48e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-09;9!UBERON:0001557;1.96e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.04e-11,160;UBERON:0000925,2.04e-11,160;UBERON:0006595,2.04e-11,160;UBERON:0001737,2.44e-09,9;UBERON:0001007,6.49e-09,145;UBERON:0001555,6.49e-09,145;UBERON:0007026,6.49e-09,145;UBERON:0004921,4.60e-07,118 | |||
|phase1_expression=1.45342703416445,1.07050261945492,1.26858963686374,1.0007329835313,1.78784437770915,1.74467704820074,0,1.89515962028049,0.783556884599516,1.22866968250754,2.79120467188971,1.96597234917155,1.05506791291381,1.23766352960047,3.97676850873499,0.672325146451775,0,0,0,1.35433163884467,0.204000691244253,0,0.286235987131057,0.410623275218653,0,0,0.0821005894499457,0,0,0,0.928896739896456,3.67768489791571,0.6024118375565,2.58827807116751,0,0,0.880801318004542,0,0.601633342410425,0.434021741431704,1.11957737119962,1.29557466407592,0.77272670290256,0.726991193897824,0.377875943688809,0.727752183563449,0.929716147622738,1.6446715520873,1.54853185447552,0,0.256160706529101,0,0.344745680736619,1.29096936716765,0,0.752969358170419,1.63743690034707,0.674170453335254,0.918251677112708,0.962787081228281,0,0,0,0,0.290209238628584,0,0,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0,0.632924774881769,0.422510572623884,0.637812899895131,0.209658645508376,1.12328631146495,0.450530678524519,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0.786839080455332,0,0.411202997999018,0,0.977766799900771,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0.434473211648397,0,1.34140171940727,1.2786256184353,2.89151321907653,0.50133791063589,2.02785126545153,0,1.94653948121054,0.378139268656271,0.221729397462564,0,0.916853528483988,3.64295288292542,1.85392221392215,1.29818957461873,0.696518949197069,1.19662164466979,0.715471872916026,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,2.61656431285521,1.49091585508596,0.886413581652058,1.72131935057184,2.58152958673932,0.709336764396714,1.12135520028461,0,0.74000264525148,0.933633106199299,0.134710672069688,0.980771418680752,0.151357427644931,0,2.34321431833797,1.24864030732128,0,1.04614076386261,0,0.485618833104395,0,0.816616685019573,0.368502951935304,1.34323515528495,2.37600571456411,1.7308685049499,0,0.718618141816238,0.505008341862199,0.625592599359821,0,1.31693286264251,1.22595118319608,2.85452311922534,0.453728732640084,1.61450672119976,0.427114777637135,0.635795703478686,1.20036438433761,1.13357782162283,1.54584324027377,1.30281799432113,1.0126579934476,1.16924406193438,1.26216887122057,1.01254888506529,1.77810662500693,1.42003837006646,0.806016785821122,0.847802961552438,1.54608682530637,1.36373060295417,1.43402297694502,1.21973706129595,1.06023814657188,1.16193942869518,0.829288440122964,1.26160425437814,0.72995471815166,0,1.28648187638577,0,0.928735856063958,1.44375896333917,4.61396520155391,6.57480291304597,3.13314338848527,4.41175890929576,7.84365998732662,2.84724742933316,4.98875840192608,3.33576490713088,4.23221872641029,0,0,1.2347220339942,0,1.26755034821831,0,2.36315962672562,0,0.737930631258681,0.514703430895577,1.42675371031213,5.62008766288098,1.40740561376283,0.833296006426766,5.86454949558584,2.07986957055916,0,0.463721619900307,0.234817388471643,0.577465791044295,0.462985512576611,0.190254152234598,0.790204397959275,3.43394464837949,1.72351904261178,1.17002132569619,0.445893486866185,0,1.00789276919316,0.850650583454319,2.32852159027406,1.16253575405585,0.766765358330422,0,0,1.03664057770386,0.144119953416961,1.38866676769018,1.65094525159639,5.72982638337417,0,1.71072446022705,1.43958489784653,8.10926256178577,1.71495859578347,0.224262168690721,1.30788020649984,0.07333828582095,1.03417372606222,3.57656445851882,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0.799266537048298,0.428933980974443,2.71310802695722,2.46972101034231,0,0.355391948742546,2.37585561880029,1.50719688529793,0,1.59956785891291,3.64871341923571,2.00902836572851,0,0.239624855491583,0,0,0.723906533337896,1.02738161275192,0.716243852959582,0,0.591092280605782,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.50051156317903,1.35632511849868,1.03985430765404,1.42743191037729,2.68094105557689,1.40569697991256,2.10662269809403,9.09630016223939,2.0694614258501,0,0.737476674166813,0.60818530127658,0.391602314925481,1.71571711905428,0,0.215714200818617,0.640365346820666,3.33440328590885,11.6504807657348,1.5119514666484,1.48864684691266,1.2276957863045,1.12264037773229,2.43464383585832,2.04682899626681,0.965123526861645,5.93672265779964,0,0,0.492762936082855,0,0.116210378459959,1.0877350463246,0.601519410909855,2.20994373446151,1.49258782613989,0.364182336013434,2.09799063935079,1.35359883872224,0.693138033939733,3.13739907670742,2.92278449306521,0.73886140225013,1.13733384070897,0,0.647747748306418,0,0,1.00337954770971,1.52925763827023,1.66215201785745,0.895499018888713,0.438519753291869,0.261435451024901,2.05160100093111,1.96808787419823,0.976135183992909,1.64865618636356,0.366277859273374,0.330037999682352,1.14853107599234,0,0,0.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| ||
|short_description=p3@AVPI1 | |short_description=p3@AVPI1 | ||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p3@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.04e-11 | 160 |
endoderm | 2.04e-11 | 160 |
presumptive endoderm | 2.04e-11 | 160 |
larynx | 2.44e-09 | 9 |
digestive system | 6.49e-09 | 145 |
digestive tract | 6.49e-09 | 145 |
primitive gut | 6.49e-09 | 145 |
subdivision of digestive tract | 4.60e-07 | 118 |