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FFCP PHASE1:Mm9::chr15:91881584..91881601,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12805
|EntrezGene=12805
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P12960
|UniProt=P12960
|association_with_transcript=0bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end
|association_with_transcript=0bp_to_ENSMUST00000141187,ENSMUST00000169825,NM_001159648,uc007xii.1,uc007xim.2_5end
|cluster_id=chr15:91881584..91881601,+
|description=CAGE_peak_2_at_Cntn1_5end
|description=CAGE_peak_2_at_Cntn1_5end
|id=chr15:91881584..91881601,+
|id=chr15:91881584..91881601,+
|ontology_enrichment_celltype=CL:0000221!5.15e-15!44;CL:0000133!5.15e-15!44;CL:0002319!1.78e-14!43;CL:0000540!6.81e-13!33;CL:0000047!6.81e-13!33;CL:0000031!6.81e-13!33;CL:0000404!6.81e-13!33;CL:0000117!8.28e-11!23;CL:0000337!8.28e-11!23;CL:0000055!4.83e-10!50;CL:0000393!7.72e-09!39;CL:0000211!7.72e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,6.87e-13,44;CL:0000133,6.87e-13,44;CL:0002319,2.90e-12,43;CL:0000117,3.80e-12,23;CL:0000337,3.80e-12,23;CL:0000540,4.94e-12,33;CL:0000047,4.94e-12,33;CL:0000031,4.94e-12,33;CL:0000404,4.94e-12,33;CL:0000393,9.23e-09,39;CL:0000211,9.23e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.22e-36!73;UBERON:0005743!2.22e-36!73;UBERON:0000073!4.95e-36!75;UBERON:0001016!4.95e-36!75;UBERON:0004121!5.06e-34!102;UBERON:0000924!5.06e-34!102;UBERON:0006601!5.06e-34!102;UBERON:0002346!1.57e-31!71;UBERON:0003075!1.57e-31!71;UBERON:0007284!1.57e-31!71;UBERON:0000033!6.55e-30!63;UBERON:0001049!2.05e-28!52;UBERON:0005068!2.05e-28!52;UBERON:0006241!2.05e-28!52;UBERON:0007135!2.05e-28!52;UBERON:0000955!1.30e-27!50;UBERON:0006238!1.30e-27!50;UBERON:0002616!5.95e-27!49;UBERON:0003056!3.33e-24!49;UBERON:0003080!4.24e-21!40;UBERON:0002780!2.64e-20!39;UBERON:0001890!2.64e-20!39;UBERON:0006240!2.64e-20!39;UBERON:0002020!1.08e-17!34;UBERON:0007811!2.62e-15!86;UBERON:0002791!7.16e-15!29;UBERON:0003528!7.16e-15!29;UBERON:0001893!7.16e-15!29;UBERON:0000153!3.63e-13!94;UBERON:0000956!1.12e-10!21;UBERON:0001869!1.12e-10!21;UBERON:0000203!1.12e-10!21;UBERON:0002619!8.88e-10!17;UBERON:0003076!9.69e-08!12;UBERON:0003057!9.69e-08!12;UBERON:0002021!1.38e-07!10;UBERON:0000411!1.38e-07!10;UBERON:0001950!1.38e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.45e-39,73;UBERON:0001016,1.85e-38,75;UBERON:0002346,3.31e-37,64;UBERON:0003075,3.31e-37,64;UBERON:0007284,3.31e-37,64;UBERON:0000073,2.19e-36,54;UBERON:0004121,2.46e-35,95;UBERON:0000924,2.46e-35,95;UBERON:0006601,2.46e-35,95;UBERON:0001049,3.47e-34,52;UBERON:0005068,3.47e-34,52;UBERON:0006241,3.47e-34,52;UBERON:0007135,3.47e-34,52;UBERON:0010371,1.07e-32,73;UBERON:0000955,5.95e-30,47;UBERON:0006238,5.95e-30,47;UBERON:0002616,4.16e-29,46;UBERON:0003056,4.75e-28,49;UBERON:0003080,1.55e-25,40;UBERON:0002780,1.67e-24,39;UBERON:0001890,1.67e-24,39;UBERON:0006240,1.67e-24,39;UBERON:0010314,6.65e-22,92;UBERON:0002020,4.53e-21,34;UBERON:0003528,2.20e-17,29;UBERON:0002791,2.20e-17,29;UBERON:0001893,2.20e-17,29;UBERON:0000956,6.44e-12,21;UBERON:0001869,6.44e-12,21;UBERON:0000203,6.44e-12,21;UBERON:0002619,1.50e-11,17;UBERON:0002021,1.55e-09,10;UBERON:0000411,1.55e-09,10;UBERON:0001950,1.55e-09,10;UBERON:0003076,8.09e-09,12;UBERON:0003057,8.09e-09,12;UBERON:0001894,5.32e-08,10;UBERON:0006222,5.32e-08,10;UBERON:0002420,9.34e-07,8;UBERON:0007245,9.34e-07,8;UBERON:0010009,9.34e-07,8;UBERON:0010011,9.34e-07,8;UBERON:0000454,9.34e-07,8
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0,0,0,0,0,0,0,0,10.4603246885816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,2.39827672018491,2.63623419281366,7.19390626574849,0.55994568650145,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,3.29560121570245,0.768436610643109,0.829516898467821,1.62007125998029,1.68259969081106,18.5673139862472,19.2155630627904,1.46988959057945,0.766763768145891,3.67687514644008,61.6648933596577,64.7374804091902,70.8126118311282,2.37395317914349,2.74462930807229,3.12548022334056,44.3900968412196,48.9603470727562,43.0891058730605,25.0434297652618,19.7896636310753,8.38797506213853,0.227178579999552,1.058001841495,0,0,0,0,0,0,1.96622188184453,0,0,0,12.1125341007945,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,79.0508151931177,69.7457533688805,1.27728527604296,0,0,0,71.3003443566956,39.8025524452205,8.41884159156192,44.1513773288382,36.5673103982373,53.6093154963665,52.7284104970212,0.81471491080253,0,0,3.36706969418358,0.650602214813519,0.689706313300419,2.34080768746954,2.86339153887859,4.35433594568498,7.68682321709099,6.74652416830048,12.4177617954728,0,0.189106080167819,0.351902248327898,0,0,1.0447564995665,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,43.1094394556461,9.57012895127345,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,1.4117846723634,0,0.951128130562796,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.420814919341911,0.316182685621286,0.738050739898011,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.47802552133284,0,0,0,0,0.837531287209079,0.476087281772027,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0,61.1697747853487,63.6459458195663,0,0,0.631016438832513,1.95219372148319,4.09304455692318,0.955875191810208,0.891194696329576,0.849229592366497,1.61924280669958,3.50707029493574,3.16230222357219,26.66966926301,0.425820255624806,0.712262414669021,0.162886959353576,0.824850614862677,0,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,0,0,25.8734100372879,3.42116078659489,2.06973894052407,6.21577401591618,10.995094485821,10.7021290561242,10.2020392773315,7.61162372786498,0,0,1.32317038832977,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,56.1838665091844,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,3.37828455812128,2.01466786693992,0.428736758158132,0,34.4498623996411,37.2863441570813,38.3839994004396,30.9335728218638,41.1049511862385,53.6329667146687,33.0761025113585,46.3830839320947,42.5953864445152,40.385304316642,0,0,0.170733605754134,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,1.64828045791115,1.92551525755089,1.51618327058278,2.5347929989024,1.32038438970253,1.21733959710847,1.6646539625266,1.26358031702349,1.42888107384922,1.62238056322798,1.15745532278223,2.47251540481984,1.32479028120958,1.71434626192708,1.4198064492747,2.62279808942053,1.88950341622027,1.88218760830661,1.77690676572521,1.46342378298218,1.8414879800649,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,1.22769312950907,1.39443157067369,1.15743966588685,2.24829520144151,0.467863216890817,1.50409737833809,1.72159498861959,1.10295709559758,1.39120701372253
|phase1_expression=3.68342348341026,0,0,0,0,0,0,0.774739940649458,0,0,0,0,0,0,0,0,0,0,0,0,10.4603246885816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,2.39827672018491,2.63623419281366,7.19390626574849,0.55994568650145,2.87505128729943,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,3.29560121570245,0.768436610643109,0.829516898467821,1.62007125998029,1.68259969081106,18.5673139862472,19.2155630627904,1.46988959057945,0.766763768145891,3.67687514644008,61.6648933596577,64.7374804091902,70.8126118311282,2.37395317914349,2.74462930807229,3.12548022334056,44.3900968412196,48.9603470727562,43.0891058730605,25.0434297652618,19.7896636310753,8.38797506213853,0.227178579999552,1.058001841495,0,0,0,0,0,0,1.96622188184453,0,0,0,12.1125341007945,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,1.52865319276416,0.628332956648377,0,0.289198713839823,0,0,0,0,1.86391761218122,79.0508151931177,69.7457533688805,1.27728527604296,0,0,0,71.3003443566956,39.8025524452205,8.41884159156192,44.1513773288382,36.5673103982373,53.6093154963665,52.7284104970212,0.81471491080253,0,0,3.36706969418358,0.650602214813519,0.689706313300419,2.34080768746954,2.86339153887859,4.35433594568498,7.68682321709099,6.74652416830048,12.4177617954728,0,0.189106080167819,0.351902248327898,0,0,1.0447564995665,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,43.1094394556461,9.57012895127345,0,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,1.4117846723634,0,0.951128130562796,0.949058123089023,0.329397909448022,0.502670417600539,0.795825888164603,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,0.379335801906163,0.114248512609729,1.1270773567308,0,0.387904974335251,0.420814919341911,0.316182685621286,0.738050739898011,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.47802552133284,0,0,0,0,0.837531287209079,0.476087281772027,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0,61.1697747853487,63.6459458195663,0,0,0.631016438832513,1.95219372148319,4.09304455692318,0.955875191810208,0.891194696329576,0.849229592366497,1.61924280669958,3.50707029493574,3.16230222357219,26.66966926301,0.425820255624806,0.712262414669021,0.162886959353576,0.824850614862677,0,0,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,0,0,25.8734100372879,3.42116078659489,2.06973894052407,6.21577401591618,10.995094485821,10.7021290561242,10.2020392773315,7.61162372786498,0,0,1.32317038832977,0.8244312647074,0,0.241251699712623,0.358117032009409,0.492422699235184,0,56.1838665091844,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,1.29606408986162,0.836353184057875,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0.579568782096571,3.37828455812128,2.01466786693992,0.428736758158132,0,34.4498623996411,37.2863441570813,38.3839994004396,30.9335728218638,41.1049511862385,53.6329667146687,33.0761025113585,46.3830839320947,42.5953864445152,40.385304316642,0,0,0.170733605754134,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,1.64828045791115,1.92551525755089,1.51618327058278,2.5347929989024,1.32038438970253,1.21733959710847,1.6646539625266,1.26358031702349,1.42888107384922,1.62238056322798,1.15745532278223,2.47251540481984,1.32479028120958,1.71434626192708,1.4198064492747,2.62279808942053,1.88950341622027,1.88218760830661,1.77690676572521,1.46342378298218,1.8414879800649,1.90125759384206,3.36685362994643,2.25406534435931,2.1670986122624,1.22769312950907,1.39443157067369,1.15743966588685,2.24829520144151,0.467863216890817,1.50409737833809,1.72159498861959,1.10295709559758,1.39120701372253
|short_description=p2@Cntn1
|short_description=p2@Cntn1
}}
}}

Latest revision as of 08:43, 27 September 2015

Short description:p2@Cntn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cntn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000141187, ENSMUST00000169825, NM_001159648, uc007xii.1, uc007xim.2_5end
EntrezGene:Cntn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cntn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D361.66
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F364.74
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D770.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B279.05
cerebellum, neonate N30.CNhs11135.1395-42I269.75
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A471.30
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D544.15
cortex, neonate N30.CNhs11107.1392-42F236.57
diencephalon, adult.CNhs10482.20-12F253.61
diencephalon, neonate N30.CNhs11201.1388-42B252.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E843.11
hippocampus, neonate N00.CNhs11228.627-43G19.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C261.17
medulla oblongata, neonate N30.CNhs11200.1396-42A363.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C956.18
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A553.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A746.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.60
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.87e-1344
neurectodermal cell6.87e-1344
neural cell2.90e-1243
CNS neuron (sensu Vertebrata)3.80e-1223
neuroblast (sensu Vertebrata)3.80e-1223
neuron4.94e-1233
neuronal stem cell4.94e-1233
neuroblast4.94e-1233
electrically signaling cell4.94e-1233
electrically responsive cell9.23e-0939
electrically active cell9.23e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.45e-3973
nervous system1.85e-3875
neurectoderm3.31e-3764
neural plate3.31e-3764
presumptive neural plate3.31e-3764
regional part of nervous system2.19e-3654
ectoderm-derived structure2.46e-3595
ectoderm2.46e-3595
presumptive ectoderm2.46e-3595
neural tube3.47e-3452
neural rod3.47e-3452
future spinal cord3.47e-3452
neural keel3.47e-3452
ecto-epithelium1.07e-3273
brain5.95e-3047
future brain5.95e-3047
regional part of brain4.16e-2946
pre-chordal neural plate4.75e-2849
anterior neural tube1.55e-2540
regional part of forebrain1.67e-2439
forebrain1.67e-2439
future forebrain1.67e-2439
structure with developmental contribution from neural crest6.65e-2292
gray matter4.53e-2134
brain grey matter2.20e-1729
regional part of telencephalon2.20e-1729
telencephalon2.20e-1729
cerebral cortex6.44e-1221
cerebral hemisphere6.44e-1221
pallium6.44e-1221
regional part of cerebral cortex1.50e-1117
occipital lobe1.55e-0910
visual cortex1.55e-0910
neocortex1.55e-0910
posterior neural tube8.09e-0912
chordal neural plate8.09e-0912
diencephalon5.32e-0810
future diencephalon5.32e-0810
basal ganglion9.34e-078
nuclear complex of neuraxis9.34e-078
aggregate regional part of brain9.34e-078
collection of basal ganglia9.34e-078
cerebral subcortex9.34e-078
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