FFCP PHASE1:Mm9::chr11:78001924..78001949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19376 | |EntrezGene=19376 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2716 | |||
|TSSclassifier=NA | |||
|UniProt=Q0PD20,B1AQD4,Q64008 | |UniProt=Q0PD20,B1AQD4,Q64008 | ||
|association_with_transcript=0bp_to_ENSMUST00000002128,ENSMUST00000150941,NM_001159482,uc011yai.1_5end | |association_with_transcript=0bp_to_ENSMUST00000002128,ENSMUST00000150941,NM_001159482,uc011yai.1_5end | ||
|cluster_id=chr11:78001924..78001949,+ | |||
|description=CAGE_peak_3_at_Rab34_5end | |description=CAGE_peak_3_at_Rab34_5end | ||
|id=chr11:78001924..78001949,+ | |id=chr11:78001924..78001949,+ | ||
|ontology_enrichment_celltype=CL:0000333!8.24e-08!10;CL:0000095!8.24e-08!10;CL:0000243!8.24e-08!10;CL:0000123!8.24e-08!10;CL:0000125!8.24e-08!10;CL:0000030!8.24e-08!10;CL:0000339!8.24e-08!10 | |ontology_enrichment_celltype=CL:0000333!8.24e-08!10;CL:0000095!8.24e-08!10;CL:0000243!8.24e-08!10;CL:0000123!8.24e-08!10;CL:0000125!8.24e-08!10;CL:0000030!8.24e-08!10;CL:0000339!8.24e-08!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.54e-08,10;CL:0000095,6.54e-08,10;CL:0000243,6.54e-08,10;CL:0000123,6.54e-08,10;CL:0000125,6.54e-08,10;CL:0000030,6.54e-08,10;CL:0000339,6.54e-08,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=4.64431656603902,0.697950815278722,0.909998478779072,0,0,0,0,0,0.84473233291,0.936258105287974,0.34243593645101,0.558405112967355,0,0,0,0,1.39912375625629,0.473193248037357,0,0,3.23164502574065,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,19.0104195143122,21.1877786248785,22.3927037637251,35.9900018400098,13.5175596955877,13.6205433295373,20.8039992009483,38.216293103724,27.3129872293446,0,0,0,11.8339340576536,19.7708073557742,12.3761302146586,2.22548106945558,1.5869729378161,3.1691570175309,39.9836547841576,39.1289710288901,21.1476433561129,14.8329954385046,16.3410426437603,21.2716078468067,12.2949857702897,2.69592992002042,1.08004750665353,2.73422449756797,3.71346279724945,3.97563373712904,1.71487118900936,2.58782771749238,4.5960939330501,0,1.40456071893706,1.0752457327937,1.58263545276233,2.74462930807229,1.04182674111352,1.95428099300967,3.37657566019008,2.59757021220577,3.24091444021034,1.28134512719193,2.23679334990361,24.7624652199512,34.0072020480535,2.02905142091174,1.72084775396277,0,0.539703191637817,0,0,2.10666630197628,13.9752864514007,18.9643783360094,20.1403557470894,3.80277233397037,7.69958864485907,5.09610479413291,0,6.27824018932521,6.84071636782766,8.59391556525132,1.1418387971906,1.03575153458869,9.94562331734326,9.88866362566974,13.7009465240464,8.99400439298628,7.83757730873637,10.2302175208063,10.8073268543521,4.94389935468748,2.74738778147832,0,5.17653919831709,1.54589062922275,2.90925151881133,3.72783522436244,2.04946557908083,1.04723353406728,0,0.359445373517761,1.19980546198682,0.381210681219194,1.79748767285787,2.28750301409313,4.02093926761166,0.347648640384553,0.255715457330331,2.90903262383384,3.24482526135515,7.63795228877372,3.4833951770826,4.0435641349388,1.26265113531884,6.76626303406059,8.04657365517155,7.02242306240862,4.67184935290717,6.32739442107349,4.22775276940004,3.65436725782942,2.84573707812917,6.89817577385095,5.29497024469894,5.80638709741031,7.67185063496512,6.39508673218875,4.179025998266,6.37924622864625,5.7719937377363,2.1066395619397,1.28673953557358,0.568326998791185,3.93538967817454,4.92504725960302,5.04173772090842,2.84093682702252,5.3126342571799,4.01094493507183,2.55787339225449,2.95100741539581,3.03589890154641,1.15191894939436,0.985004784474571,1.4592385718254,1.46199987425332,1.53685080703735,2.41571553768669,1.26173969138476,2.26390147234426,0,1.58670339998127,6.82522401712749,6.96710015581316,4.12375876230699,3.22693639397348,2.44615848229357,1.71203063501303,1.42358718463353,2.79988223030818,2.76468729680296,1.79060824837036,2.72949721966768,0.898819408654221,0.864552199498777,0.796565093017469,4.55202962287396,4.79843752960861,4.50830942692322,6.72049381889537,7.75809948670503,8.34616256694791,6.57659986092276,6.19962621514329,4.70996183524124,9.74837594982224,0.296452627087149,1.16791574001266,0.393117990226406,0.449724224769707,0,1.68824011826692,1.01850340712568,0,1.62135226775035,1.37280706594041,0,0.372140947668503,1.24815069245824,0.505157755894224,0.358794827043824,0.964887042726734,2.77129785249907,4.73728529426212,6.19266910479698,5.26209765903083,4.69380496577004,4.18765643604539,2.38043640886014,4.29294025287157,3.4679731703362,4.65075848262427,3.34855014180723,2.29408640602033,3.10832967358612,4.62876987460837,10.5553898757491,8.70249094109935,0.491764273019036,0.827810238914197,1.60550589987792,2.10981035865966,12.9508606847574,2.27223834483936,4.10160685241134,4.29482618726302,4.09304455692318,8.84184552424442,9.58034298554295,8.49229592366497,7.69140333182299,5.84511715822624,5.13874111330481,1.60660658210904,5.39372323791421,7.65682095769198,6.18970445543589,3.62934270539578,0,5.58395463156457,11.7906187216253,7.92141334974772,8.56375489354241,7.07100840271033,7.23599220871019,5.45300594216258,4.63446591900138,1.58018378967908,4.21674434299995,0,5.7874732978144,7.56256594931503,9.44318391614108,5.35842587578981,6.7389288784064,6.77801506887868,5.59466670047211,7.00269382963578,4.69343416127421,3.38931313382112,0.882113592219848,6.76033637060068,6.94297034792394,6.75504759195346,8.11731939221328,6.72977688954751,0.291480836629851,1.66882771809459,0.683483523191411,4.33412422722767,1.85194527369712,0.565105371014073,0.410082683163076,0,0.169978429993855,0.419854356970974,0.552799895217695,0,6.80122386199441,4.67634774391752,4.75223499615926,6.27264888043406,4.14888871117737,4.85511646985355,3.63675205191478,2.09404753587224,1.68499465279331,3.10669656543463,0,4.63501292736334,4.96375471371293,6.22243802700952,4.39143399824286,4.56181538825101,6.10257640957921,4.4269490846943,6.39642000996836,2.89900944991207,0.288030006257865,1.26404448251271,5.0681303822541,2.77319584345034,1.55904987573354,1.9692936523423,0.993406773906324,0.360586348559907,0.590758108698309,0.706765149637033,0.457240839929999,0.201652370273681,0.38983152295901,0.288635524920988,0.467507608726276,1.81384306892169,4.21773311410723,3.49884040776955,2.01461539636894,4.25017106870819,3.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|phase1_expression=4.64431656603902,0.697950815278722,0.909998478779072,0,0,0,0,0,0.84473233291,0.936258105287974,0.34243593645101,0.558405112967355,0,0,0,0,1.39912375625629,0.473193248037357,0,0,3.23164502574065,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,19.0104195143122,21.1877786248785,22.3927037637251,35.9900018400098,13.5175596955877,13.6205433295373,20.8039992009483,38.216293103724,27.3129872293446,0,0,0,11.8339340576536,19.7708073557742,12.3761302146586,2.22548106945558,1.5869729378161,3.1691570175309,39.9836547841576,39.1289710288901,21.1476433561129,14.8329954385046,16.3410426437603,21.2716078468067,12.2949857702897,2.69592992002042,1.08004750665353,2.73422449756797,3.71346279724945,3.97563373712904,1.71487118900936,2.58782771749238,4.5960939330501,0,1.40456071893706,1.0752457327937,1.58263545276233,2.74462930807229,1.04182674111352,1.95428099300967,3.37657566019008,2.59757021220577,3.24091444021034,1.28134512719193,2.23679334990361,24.7624652199512,34.0072020480535,2.02905142091174,1.72084775396277,0,0.539703191637817,0,0,2.10666630197628,13.9752864514007,18.9643783360094,20.1403557470894,3.80277233397037,7.69958864485907,5.09610479413291,0,6.27824018932521,6.84071636782766,8.59391556525132,1.1418387971906,1.03575153458869,9.94562331734326,9.88866362566974,13.7009465240464,8.99400439298628,7.83757730873637,10.2302175208063,10.8073268543521,4.94389935468748,2.74738778147832,0,5.17653919831709,1.54589062922275,2.90925151881133,3.72783522436244,2.04946557908083,1.04723353406728,0,0.359445373517761,1.19980546198682,0.381210681219194,1.79748767285787,2.28750301409313,4.02093926761166,0.347648640384553,0.255715457330331,2.90903262383384,3.24482526135515,7.63795228877372,3.4833951770826,4.0435641349388,1.26265113531884,6.76626303406059,8.04657365517155,7.02242306240862,4.67184935290717,6.32739442107349,4.22775276940004,3.65436725782942,2.84573707812917,6.89817577385095,5.29497024469894,5.80638709741031,7.67185063496512,6.39508673218875,4.179025998266,6.37924622864625,5.7719937377363,2.1066395619397,1.28673953557358,0.568326998791185,3.93538967817454,4.92504725960302,5.04173772090842,2.84093682702252,5.3126342571799,4.01094493507183,2.55787339225449,2.95100741539581,3.03589890154641,1.15191894939436,0.985004784474571,1.4592385718254,1.46199987425332,1.53685080703735,2.41571553768669,1.26173969138476,2.26390147234426,0,1.58670339998127,6.82522401712749,6.96710015581316,4.12375876230699,3.22693639397348,2.44615848229357,1.71203063501303,1.42358718463353,2.79988223030818,2.76468729680296,1.79060824837036,2.72949721966768,0.898819408654221,0.864552199498777,0.796565093017469,4.55202962287396,4.79843752960861,4.50830942692322,6.72049381889537,7.75809948670503,8.34616256694791,6.57659986092276,6.19962621514329,4.70996183524124,9.74837594982224,0.296452627087149,1.16791574001266,0.393117990226406,0.449724224769707,0,1.68824011826692,1.01850340712568,0,1.62135226775035,1.37280706594041,0,0.372140947668503,1.24815069245824,0.505157755894224,0.358794827043824,0.964887042726734,2.77129785249907,4.73728529426212,6.19266910479698,5.26209765903083,4.69380496577004,4.18765643604539,2.38043640886014,4.29294025287157,3.4679731703362,4.65075848262427,3.34855014180723,2.29408640602033,3.10832967358612,4.62876987460837,10.5553898757491,8.70249094109935,0.491764273019036,0.827810238914197,1.60550589987792,2.10981035865966,12.9508606847574,2.27223834483936,4.10160685241134,4.29482618726302,4.09304455692318,8.84184552424442,9.58034298554295,8.49229592366497,7.69140333182299,5.84511715822624,5.13874111330481,1.60660658210904,5.39372323791421,7.65682095769198,6.18970445543589,3.62934270539578,0,5.58395463156457,11.7906187216253,7.92141334974772,8.56375489354241,7.07100840271033,7.23599220871019,5.45300594216258,4.63446591900138,1.58018378967908,4.21674434299995,0,5.7874732978144,7.56256594931503,9.44318391614108,5.35842587578981,6.7389288784064,6.77801506887868,5.59466670047211,7.00269382963578,4.69343416127421,3.38931313382112,0.882113592219848,6.76033637060068,6.94297034792394,6.75504759195346,8.11731939221328,6.72977688954751,0.291480836629851,1.66882771809459,0.683483523191411,4.33412422722767,1.85194527369712,0.565105371014073,0.410082683163076,0,0.169978429993855,0.419854356970974,0.552799895217695,0,6.80122386199441,4.67634774391752,4.75223499615926,6.27264888043406,4.14888871117737,4.85511646985355,3.63675205191478,2.09404753587224,1.68499465279331,3.10669656543463,0,4.63501292736334,4.96375471371293,6.22243802700952,4.39143399824286,4.56181538825101,6.10257640957921,4.4269490846943,6.39642000996836,2.89900944991207,0.288030006257865,1.26404448251271,5.0681303822541,2.77319584345034,1.55904987573354,1.9692936523423,0.993406773906324,0.360586348559907,0.590758108698309,0.706765149637033,0.457240839929999,0.201652370273681,0.38983152295901,0.288635524920988,0.467507608726276,1.81384306892169,4.21773311410723,3.49884040776955,2.01461539636894,4.25017106870819,3.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| ||
|short_description=p3@Rab34 | |short_description=p3@Rab34 | ||
}} | }} |
Latest revision as of 17:46, 25 September 2015
Short description: | p3@Rab34 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rab34_5end |
Coexpression cluster: | MCL_coexpression_mm9:2716 |
Association with transcript: | 0bp_to_ENSMUST00000002128, ENSMUST00000150941, NM_001159482, uc011yai.1_5end |
EntrezGene: | Rab34 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.54e-08 | 10 |
neuron associated cell | 6.54e-08 | 10 |
glial cell (sensu Vertebrata) | 6.54e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.54e-08 | 10 |
glial cell | 6.54e-08 | 10 |
glioblast | 6.54e-08 | 10 |
glioblast (sensu Vertebrata) | 6.54e-08 | 10 |