FFCP PHASE1:Hg19::chr10:75669192..75669215,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:75669192..75669215,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:75669192..75669215,+ | |description=CAGE_peak_at_chr10:75669192..75669215,+ | ||
|id=chr10:75669192..75669215,+ | |id=chr10:75669192..75669215,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.21e-42!76;CL:0002057!1.15e-38!42;CL:0000763!1.40e-36!112;CL:0000049!1.40e-36!112;CL:0000860!3.47e-35!45;CL:0000738!1.58e-34!140;CL:0000037!5.28e-34!172;CL:0000566!5.28e-34!172;CL:0000557!9.28e-34!71;CL:0000988!1.03e-30!182;CL:0002009!1.04e-30!65;CL:0000839!1.12e-30!70;CL:0002032!3.30e-30!165;CL:0000837!3.30e-30!165;CL:0002194!2.53e-28!63;CL:0000576!2.53e-28!63;CL:0000040!2.53e-28!63;CL:0000559!2.53e-28!63;CL:0002031!1.78e-24!124;CL:0002087!1.46e-22!119;CL:0000094!4.88e-13!8;CL:0000063!4.96e-11!578;CL:0000134!3.56e-10!358;CL:0002320!1.58e-09!365;CL:0000081!7.11e-09!11;CL:0000219!1.95e-08!390;CL:0000012!1.66e-07!682;CL:0000548!3.34e-07!679;CL:0000004!3.34e-07!679;CL:0000255!3.34e-07!679 | |ontology_enrichment_celltype=CL:0000766!4.21e-42!76;CL:0002057!1.15e-38!42;CL:0000763!1.40e-36!112;CL:0000049!1.40e-36!112;CL:0000860!3.47e-35!45;CL:0000738!1.58e-34!140;CL:0000037!5.28e-34!172;CL:0000566!5.28e-34!172;CL:0000557!9.28e-34!71;CL:0000988!1.03e-30!182;CL:0002009!1.04e-30!65;CL:0000839!1.12e-30!70;CL:0002032!3.30e-30!165;CL:0000837!3.30e-30!165;CL:0002194!2.53e-28!63;CL:0000576!2.53e-28!63;CL:0000040!2.53e-28!63;CL:0000559!2.53e-28!63;CL:0002031!1.78e-24!124;CL:0002087!1.46e-22!119;CL:0000094!4.88e-13!8;CL:0000063!4.96e-11!578;CL:0000134!3.56e-10!358;CL:0002320!1.58e-09!365;CL:0000081!7.11e-09!11;CL:0000219!1.95e-08!390;CL:0000012!1.66e-07!682;CL:0000548!3.34e-07!679;CL:0000004!3.34e-07!679;CL:0000255!3.34e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.19e-53;33!CL:0002057;9.19e-53;33!CL:0000473;5.35e-40;39!CL:0000234;5.35e-40;39!CL:0000094;3.83e-32;8!CL:0000766;5.79e-32;69!CL:0000576;8.35e-30;48!CL:0000081;5.36e-23;11!CL:0000763;2.79e-15;100!CL:0000775;4.82e-13;3!CL:0000767;7.65e-13;3!CL:0000226;2.81e-12;3!CL:0000842;2.81e-12;3!CL:0002087;6.44e-11;104!CL:0000738;2.82e-10;136!CL:0000771;9.32e-10;2!CL:0001014;2.95e-09;2!CL:0001016;2.95e-09;2!CL:0000988;2.03e-07;177!CL:0000097;2.55e-07;5!CL:0002393;5.76e-07;6!CL:0002397;5.76e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.80e-70,72;CL:0000860,9.32e-58,42;CL:0002057,9.32e-58,42;CL:0000473,1.11e-53,48;CL:0000234,1.11e-53,48;CL:0000763,1.50e-52,108;CL:0000049,1.50e-52,108;CL:0000557,5.42e-52,67;CL:0000738,6.85e-52,136;CL:0002009,6.25e-47,61;CL:0000839,9.27e-46,66;CL:0000037,3.17e-42,168;CL:0002194,1.42e-41,59;CL:0000576,1.42e-41,59;CL:0000040,1.42e-41,59;CL:0000559,1.42e-41,59;CL:0000988,1.36e-39,177;CL:0002032,4.05e-36,161;CL:0000837,4.05e-36,161;CL:0000094,3.62e-32,8;CL:0002031,1.29e-29,120;CL:0002087,4.50e-27,115;CL:0000081,5.14e-23,11;CL:0000134,7.44e-16,354;CL:0002320,2.37e-15,361;CL:0000219,1.40e-13,386;CL:0000775,4.28e-13,3;CL:0000767,8.13e-13,3;CL:0000226,3.35e-12,3;CL:0000842,3.35e-12,3;CL:0000034,1.65e-11,441;CL:0000048,2.06e-11,427;CL:0000723,4.10e-11,433;CL:0000771,9.33e-10,2;CL:0001014,2.72e-09,2;CL:0001016,2.72e-09,2;CL:0000097,2.44e-07,5;CL:0002028,2.44e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-40;42!CL:0000049;1.12e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-29!80;UBERON:0001474!5.63e-28!86;UBERON:0004765!2.80e-27!101;UBERON:0001434!2.80e-27!101;UBERON:0002390!7.69e-25!102;UBERON:0003061!7.69e-25!102;UBERON:0002193!4.14e-21!112;UBERON:0002405!1.38e-18!115;UBERON:0002204!2.24e-12!167;UBERON:0002384!4.83e-09!375;UBERON:0003081!6.62e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-45,76;UBERON:0001474,5.60e-44,82;UBERON:0002390,1.12e-40,98;UBERON:0003061,1.12e-40,98;UBERON:0004765,2.09e-39,90;UBERON:0002193,3.54e-36,108;UBERON:0002405,1.94e-35,93;UBERON:0001434,1.04e-34,100;UBERON:0002204,1.06e-17,167;UBERON:0003081,1.82e-15,203;UBERON:0002384,1.15e-14,371;UBERON:0000926,7.81e-08,315;UBERON:0004120,7.81e-08,315;UBERON:0006603,7.81e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,13.7677496897116,3.0706351847777,6.96672554922342,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,30.4697474692533,30.6833004629317,21.7010870715852,0,0,0,0.290796477559129,0,0.242584061187816,1.62700325833979,2.87817521615278,5.26500830521676,1.43846196161075,2.56160706529101,8.98632473576624,16.5477926753577,21.9464792418501,25.7310324529249,0.564727018627814,0.818718450173537,2.02251136000576,9.48860066349798,12.1953030288916,9.59005688698562,0.329851300186716,0.398927315243264,1.70489900213078,4.06292934080018,3.40431134814684,3.11411124497787,2.26123798731069,2.08593167368081,5.42972111762792,1.81619850790011,4.05105399586321,4.74693581161327,0.211255286311942,0.850417199860174,0.419317291016752,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0.953962497221368,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,195.035017805374,349.002237733493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0.985326475791887,0,4.56121854189699,1.15295962733569,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,2.05348858047597,0,0,0,0.167516265334349,0,23.9682247663098,2.99161459204025,27.3514238867783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,6.25571182373989,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0.47003968731907,0,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0.569261198172555,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.881931576729399,0.69647365264322,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,4.94942561413301,22.4402566821805,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0.633936370075881,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,1.4460082245969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.651226148887796,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,13.7677496897116,3.0706351847777,6.96672554922342,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,30.4697474692533,30.6833004629317,21.7010870715852,0,0,0,0.290796477559129,0,0.242584061187816,1.62700325833979,2.87817521615278,5.26500830521676,1.43846196161075,2.56160706529101,8.98632473576624,16.5477926753577,21.9464792418501,25.7310324529249,0.564727018627814,0.818718450173537,2.02251136000576,9.48860066349798,12.1953030288916,9.59005688698562,0.329851300186716,0.398927315243264,1.70489900213078,4.06292934080018,3.40431134814684,3.11411124497787,2.26123798731069,2.08593167368081,5.42972111762792,1.81619850790011,4.05105399586321,4.74693581161327,0.211255286311942,0.850417199860174,0.419317291016752,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0.953962497221368,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,195.035017805374,349.002237733493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0.985326475791887,0,4.56121854189699,1.15295962733569,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,2.05348858047597,0,0,0,0.167516265334349,0,23.9682247663098,2.99161459204025,27.3514238867783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,6.25571182373989,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0.47003968731907,0,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0.569261198172555,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.881931576729399,0.69647365264322,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,4.94942561413301,22.4402566821805,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0.633936370075881,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,1.4460082245969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.651226148887796,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:75669192..75669215,+ | |short_description=p@chr10:75669192..75669215,+ | ||
}} | }} |
Latest revision as of 15:38, 23 July 2015
Short description: | p@chr10:75669192..75669215, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:75669192..75669215, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.38e-45 | 76 |
bone element | 5.60e-44 | 82 |
hematopoietic system | 1.12e-40 | 98 |
blood island | 1.12e-40 | 98 |
skeletal element | 2.09e-39 | 90 |
hemolymphoid system | 3.54e-36 | 108 |
immune system | 1.94e-35 | 93 |
skeletal system | 1.04e-34 | 100 |
musculoskeletal system | 1.06e-17 | 167 |
lateral plate mesoderm | 1.82e-15 | 203 |
connective tissue | 1.15e-14 | 371 |
mesoderm | 7.81e-08 | 315 |
mesoderm-derived structure | 7.81e-08 | 315 |
presumptive mesoderm | 7.81e-08 | 315 |