FFCP PHASE1:Mm9::chr11:69225467..69225488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=231 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69225467..69225488,+ | |||
|description=CAGE_peak_at_chr11:69225467..69225488,+ | |description=CAGE_peak_at_chr11:69225467..69225488,+ | ||
|id=chr11:69225467..69225488,+ | |id=chr11:69225467..69225488,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.49e-21!12;CL:0000791!2.35e-20!9;CL:0000789!2.35e-20!9;CL:0002420!2.35e-20!9;CL:0002419!2.35e-20!9;CL:0000790!2.35e-20!9;CL:0000084!7.17e-20!11;CL:0000827!7.17e-20!11;CL:0000542!1.05e-19!13;CL:0000051!1.05e-19!13;CL:0000624!2.78e-18!8;CL:0000988!1.85e-17!32;CL:0002032!1.85e-17!32;CL:0000037!1.85e-17!32;CL:0000566!1.85e-17!32;CL:0000837!1.85e-17!32;CL:0000738!1.73e-14!17;CL:0002087!1.73e-14!17;CL:0000893!9.92e-14!6;CL:0002489!9.92e-14!6;CL:0000898!9.92e-14!6;CL:0000809!9.92e-14!6;CL:0000810!9.92e-14!6;CL:0000895!9.92e-14!6;CL:0000808!9.92e-14!6;CL:0000894!9.92e-14!6;CL:0000806!9.92e-14!6;CL:0000807!9.92e-14!6;CL:0000805!9.92e-14!6;CL:0002425!9.92e-14!6;CL:0002436!9.92e-14!6;CL:0002427!9.92e-14!6;CL:0002428!9.92e-14!6;CL:0002429!9.92e-14!6;CL:0002433!9.92e-14!6;CL:0002431!9.92e-14!6;CL:0002432!9.92e-14!6;CL:0002320!1.79e-12!46;CL:0000134!1.79e-12!46;CL:0000219!3.48e-11!54;CL:0002031!6.78e-11!25;CL:0000063!1.06e-10!66;CL:0000144!1.16e-09!121;CL:0000012!1.16e-09!121;CL:0000034!1.96e-09!97;CL:0000723!2.71e-07!91;CL:0000048!2.71e-07!91;CL:0002371!3.25e-07!118 | |ontology_enrichment_celltype=CL:0000838!1.49e-21!12;CL:0000791!2.35e-20!9;CL:0000789!2.35e-20!9;CL:0002420!2.35e-20!9;CL:0002419!2.35e-20!9;CL:0000790!2.35e-20!9;CL:0000084!7.17e-20!11;CL:0000827!7.17e-20!11;CL:0000542!1.05e-19!13;CL:0000051!1.05e-19!13;CL:0000624!2.78e-18!8;CL:0000988!1.85e-17!32;CL:0002032!1.85e-17!32;CL:0000037!1.85e-17!32;CL:0000566!1.85e-17!32;CL:0000837!1.85e-17!32;CL:0000738!1.73e-14!17;CL:0002087!1.73e-14!17;CL:0000893!9.92e-14!6;CL:0002489!9.92e-14!6;CL:0000898!9.92e-14!6;CL:0000809!9.92e-14!6;CL:0000810!9.92e-14!6;CL:0000895!9.92e-14!6;CL:0000808!9.92e-14!6;CL:0000894!9.92e-14!6;CL:0000806!9.92e-14!6;CL:0000807!9.92e-14!6;CL:0000805!9.92e-14!6;CL:0002425!9.92e-14!6;CL:0002436!9.92e-14!6;CL:0002427!9.92e-14!6;CL:0002428!9.92e-14!6;CL:0002429!9.92e-14!6;CL:0002433!9.92e-14!6;CL:0002431!9.92e-14!6;CL:0002432!9.92e-14!6;CL:0002320!1.79e-12!46;CL:0000134!1.79e-12!46;CL:0000219!3.48e-11!54;CL:0002031!6.78e-11!25;CL:0000063!1.06e-10!66;CL:0000144!1.16e-09!121;CL:0000012!1.16e-09!121;CL:0000034!1.96e-09!97;CL:0000723!2.71e-07!91;CL:0000048!2.71e-07!91;CL:0002371!3.25e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.63e-17,8;CL:0000791,6.35e-15,9;CL:0000789,6.35e-15,9;CL:0002420,6.35e-15,9;CL:0002419,6.35e-15,9;CL:0000790,6.35e-15,9;CL:0000084,2.85e-12,11;CL:0000827,2.85e-12,11;CL:0000838,2.83e-11,12;CL:0000542,1.98e-10,13;CL:0000051,1.98e-10,13;CL:0000815,3.65e-09,1;CL:0000792,3.65e-09,1;CL:0000988,5.21e-09,32;CL:0002032,5.21e-09,32;CL:0000037,5.21e-09,32;CL:0000837,5.21e-09,32;CL:0000213,5.27e-09,1;CL:0002078,5.27e-09,1;CL:0000115,5.27e-09,1;CL:0002262,5.27e-09,1;CL:1000398,5.27e-09,1;CL:0002320,2.94e-08,46;CL:0000134,2.94e-08,46;CL:0000738,4.88e-08,17;CL:0002087,4.88e-08,17;CL:0000034,1.38e-07,97;CL:0000219,5.74e-07,54 | |||
|ontology_enrichment_disease=DOID:0060100!1.37e-07!3;DOID:4045!1.37e-07!3 | |ontology_enrichment_disease=DOID:0060100!1.37e-07!3;DOID:4045!1.37e-07!3 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.79e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.27e-09,1;UBERON:0001281,5.27e-09,1;UBERON:0000353,5.27e-09,1;UBERON:0003497,5.27e-09,1;UBERON:0003909,5.27e-09,1;UBERON:0003928,5.27e-09,1;UBERON:0003835,5.27e-09,1;UBERON:0003513,5.27e-09,1;UBERON:0001280,5.27e-09,1;UBERON:0004647,5.27e-09,1;UBERON:0002294,5.27e-09,1;UBERON:0001173,5.27e-09,1;UBERON:0004912,5.27e-09,1;UBERON:0005171,5.27e-09,1;UBERON:0002384,2.94e-08,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,1.93684985162364,3.66050677594334,7.49006484230379,0.34243593645101,0.319088635981346,0.342401459862411,0.437102012094987,0,0,0,0,0,0.42438965179803,0,0.198581902401771,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.71965487990169,2.37917468950219,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,1.93684985162364,3.66050677594334,7.49006484230379,0.34243593645101,0.319088635981346,0.342401459862411,0.437102012094987,0,0,0,0,0,0.42438965179803,0,0.198581902401771,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,2.39961092397363,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.71965487990169,2.37917468950219,1.79659965945751,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:69225467..69225488,+ | |short_description=p@chr11:69225467..69225488,+ | ||
}} | }} |
Latest revision as of 10:03, 6 August 2015
Short description: | p@chr11:69225467..69225488, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69225467..69225488, + |
Coexpression cluster: | MCL_coexpression_mm9:231 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 9.63e-17 | 8 |
mature alpha-beta T cell | 6.35e-15 | 9 |
alpha-beta T cell | 6.35e-15 | 9 |
immature T cell | 6.35e-15 | 9 |
mature T cell | 6.35e-15 | 9 |
immature alpha-beta T cell | 6.35e-15 | 9 |
T cell | 2.85e-12 | 11 |
pro-T cell | 2.85e-12 | 11 |
lymphoid lineage restricted progenitor cell | 2.83e-11 | 12 |
lymphocyte | 1.98e-10 | 13 |
common lymphoid progenitor | 1.98e-10 | 13 |
regulatory T cell | 3.65e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.65e-09 | 1 |
hematopoietic cell | 5.21e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.21e-09 | 32 |
hematopoietic stem cell | 5.21e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.21e-09 | 32 |
lining cell | 5.27e-09 | 1 |
meso-epithelial cell | 5.27e-09 | 1 |
endothelial cell | 5.27e-09 | 1 |
endothelial cell of sinusoid | 5.27e-09 | 1 |
endothelial cell of hepatic sinusoid | 5.27e-09 | 1 |
connective tissue cell | 2.94e-08 | 46 |
mesenchymal cell | 2.94e-08 | 46 |
leukocyte | 4.88e-08 | 17 |
nongranular leukocyte | 4.88e-08 | 17 |
stem cell | 1.38e-07 | 97 |
motile cell | 5.74e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.27e-09 | 1 |
hepatic sinusoid | 5.27e-09 | 1 |
parenchyma | 5.27e-09 | 1 |
abdomen blood vessel | 5.27e-09 | 1 |
sinusoid | 5.27e-09 | 1 |
digestive system duct | 5.27e-09 | 1 |
abdominal segment blood vessel | 5.27e-09 | 1 |
trunk blood vessel | 5.27e-09 | 1 |
liver parenchyma | 5.27e-09 | 1 |
liver lobule | 5.27e-09 | 1 |
biliary system | 5.27e-09 | 1 |
biliary tree | 5.27e-09 | 1 |
biliary bud | 5.27e-09 | 1 |
hepatic duct | 5.27e-09 | 1 |
connective tissue | 2.94e-08 | 46 |