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FFCP PHASE1:Mm9::chr11:68912417..68912438,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18626
|EntrezGene=18626
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=O35973
|UniProt=O35973
|association_with_transcript=-11bp_to_ENSMUST00000021271_5end
|association_with_transcript=-11bp_to_ENSMUST00000021271_5end
|cluster_id=chr11:68912417..68912438,+
|description=CAGE_peak_3_at_Per1_5end
|description=CAGE_peak_3_at_Per1_5end
|id=chr11:68912417..68912438,+
|id=chr11:68912417..68912438,+
|ontology_enrichment_celltype=CL:0000034!1.20e-10!97;CL:0000144!1.62e-10!121;CL:0000012!1.62e-10!121;CL:0002371!3.72e-09!118;CL:0000723!5.19e-09!91;CL:0000048!5.19e-09!91;CL:0000988!5.58e-09!32;CL:0002032!5.58e-09!32;CL:0000037!5.58e-09!32;CL:0000566!5.58e-09!32;CL:0000837!5.58e-09!32;CL:0000548!4.19e-08!115;CL:0000004!4.19e-08!115;CL:0000255!4.19e-08!115;CL:0000219!6.04e-08!54;CL:0002031!2.55e-07!25;CL:0002320!6.44e-07!46;CL:0000134!6.44e-07!46
|ontology_enrichment_celltype=CL:0000034!1.20e-10!97;CL:0000144!1.62e-10!121;CL:0000012!1.62e-10!121;CL:0002371!3.72e-09!118;CL:0000723!5.19e-09!91;CL:0000048!5.19e-09!91;CL:0000988!5.58e-09!32;CL:0002032!5.58e-09!32;CL:0000037!5.58e-09!32;CL:0000566!5.58e-09!32;CL:0000837!5.58e-09!32;CL:0000548!4.19e-08!115;CL:0000004!4.19e-08!115;CL:0000255!4.19e-08!115;CL:0000219!6.04e-08!54;CL:0002031!2.55e-07!25;CL:0002320!6.44e-07!46;CL:0000134!6.44e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000034,1.13e-10,97;CL:0000723,4.96e-09,91;CL:0000048,4.96e-09,91;CL:0000988,5.45e-09,32;CL:0002032,5.45e-09,32;CL:0000037,5.45e-09,32;CL:0000837,5.45e-09,32;CL:0000219,4.29e-08,54;CL:0002031,2.50e-07,25;CL:0002320,4.62e-07,46;CL:0000134,4.62e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.97e-15!75;UBERON:0001016!9.97e-15!75;UBERON:0001017!1.06e-14!73;UBERON:0005743!1.06e-14!73;UBERON:0000955!4.21e-14!50;UBERON:0006238!4.21e-14!50;UBERON:0004121!9.96e-14!102;UBERON:0000924!9.96e-14!102;UBERON:0006601!9.96e-14!102;UBERON:0002616!1.55e-13!49;UBERON:0000033!1.46e-12!63;UBERON:0003080!3.67e-12!40;UBERON:0002780!6.09e-12!39;UBERON:0001890!6.09e-12!39;UBERON:0006240!6.09e-12!39;UBERON:0007811!1.90e-11!86;UBERON:0001049!3.77e-11!52;UBERON:0005068!3.77e-11!52;UBERON:0006241!3.77e-11!52;UBERON:0007135!3.77e-11!52;UBERON:0003056!6.37e-11!49;UBERON:0002346!1.28e-10!71;UBERON:0003075!1.28e-10!71;UBERON:0007284!1.28e-10!71;UBERON:0000153!2.75e-10!94;UBERON:0002791!2.59e-09!29;UBERON:0003528!2.59e-09!29;UBERON:0001893!2.59e-09!29;UBERON:0000956!8.08e-08!21;UBERON:0001869!8.08e-08!21;UBERON:0000203!8.08e-08!21;UBERON:0002020!1.34e-07!34;UBERON:0002619!1.69e-07!17;UBERON:0002384!6.44e-07!46;UBERON:0002021!8.90e-07!10;UBERON:0000411!8.90e-07!10;UBERON:0001950!8.90e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.55e-15,75;UBERON:0001017,1.02e-14,73;UBERON:0004121,1.61e-13,95;UBERON:0000924,1.61e-13,95;UBERON:0006601,1.61e-13,95;UBERON:0000955,3.46e-13,47;UBERON:0006238,3.46e-13,47;UBERON:0002616,1.25e-12,46;UBERON:0003080,3.55e-12,40;UBERON:0002780,5.89e-12,39;UBERON:0001890,5.89e-12,39;UBERON:0006240,5.89e-12,39;UBERON:0000073,6.60e-12,54;UBERON:0001049,3.65e-11,52;UBERON:0005068,3.65e-11,52;UBERON:0006241,3.65e-11,52;UBERON:0007135,3.65e-11,52;UBERON:0003056,6.18e-11,49;UBERON:0002346,1.40e-10,64;UBERON:0003075,1.40e-10,64;UBERON:0007284,1.40e-10,64;UBERON:0010371,1.73e-10,73;UBERON:0003528,2.53e-09,29;UBERON:0002791,2.53e-09,29;UBERON:0001893,2.53e-09,29;UBERON:0010314,6.15e-08,92;UBERON:0000956,7.91e-08,21;UBERON:0001869,7.91e-08,21;UBERON:0000203,7.91e-08,21;UBERON:0002020,1.31e-07,34;UBERON:0002619,1.66e-07,17;UBERON:0002384,4.62e-07,46;UBERON:0002021,8.75e-07,10;UBERON:0000411,8.75e-07,10;UBERON:0001950,8.75e-07,10
|phase1_expression=7.36684696682052,4.18770489167233,2.27499619694768,2.11724947914781,0.500895729946347,2.68606835059024,2.80335168714631,10.2007425518845,63.9180798568567,73.7303257914279,14.7247452673934,8.53562101250099,6.84802919724823,10.3156074854417,1.66554880907831,1.82227740650843,2.09868563438444,5.8360500591274,6.58149281307546,5.94145512517242,9.35476191661768,3.17731043842833,1.82839852397255,2.87986361028132,1.83527424853736,2.8711598205751,2.15380998079537,2.58565479223067,0.570070258369122,0.252030129759931,1.10865255327652,13.9706748161119,11.6862309641068,15.8481681015439,0.577703239502549,0.831173226792462,0.816677425049476,23.0192396905299,16.4080422349998,6.28228492768558,36.4703522579229,34.8353197328807,13.5942898848723,1.6366586336825,2.23029248682932,0.917733760808408,3.12956537739216,5.23260375313072,3.73466510648602,8.36048566019419,5.17949760013841,4.31257693094915,23.4895648480831,19.5847778343063,20.1656279485478,10.2903774414379,3.43840127926508,7.73508138416164,4.45096213891115,4.7609188134483,2.53532561402472,3.72728985276045,3.55717918444456,6.29929802096979,8.89979726310277,7.8152812644071,6.2916023208865,5.76327457982332,3.7328260431052,4.18518408828241,2.94454945891935,2.85650984403804,1.98781686856452,3.30725157880376,4.79227355091182,7.35375029288017,8.8092704799511,5.2351808614927,6.14426133024974,3.56092976871523,5.94669683415663,3.64639359389732,6.70039197603314,3.37657566019008,6.87592114995646,3.53554302568401,2.13557521198654,1.3047961207771,3.25622631332691,3.09843396437821,28.1168554040627,0,31.9586526842643,0,0,2.68816132258401,1.54488862144927,2.38602451609281,0.779358013808606,1.06001872353102,3.80277233397037,7.69958864485907,7.64415719119937,7.11066703153331,1.29894624606728,1.01343946190039,0.505524445014783,3.31133251185274,5.43769555659061,6.38301197978747,1.38788261412909,3.95805121805784,2.99800146432876,2.71300752994721,7.17291113527799,2.76466500925286,12.3597483867187,5.20557684911682,1.76922110389975,0.808834249737046,1.10420759230197,0,1.86391761218122,9.66176630138106,5.65506108396329,2.29911349687732,24.2026551501959,13.7977628128484,12.7070227073065,5.39246301857362,11.8950156732843,5.78010019719176,10.081810571152,5.37002460393694,6.85700547046548,4.54275536589721,6.11036183101898,2.23932547098167,3.0326731012041,5.6819301089348,2.08192708740326,2.29902104433473,2.88099407688559,1.80845781402858,4.76255494059295,2.43416068541215,2.34254311399322,7.76110112217047,2.15567992932842,1.70195472151037,2.46331573829528,2.6303487891309,3.05851974148158,2.089512999133,1.64625709126355,1.99034266818493,10.5331978096985,7.97778512055617,4.83077948972507,3.10688658803253,2.57978665979206,1.2604344302271,2.3674473558521,2.16440654922144,1.3884040159864,1.39520366850245,2.14618721119695,5.95503246072564,0.493679549740441,1.80584210487005,1.78351381000883,3.94739966048397,0.878200461164203,1.8788898626452,5.25724871410318,3.91037527041281,0.991256348951394,0.528901133327089,1.06644125267617,2.78684006232526,2.44848176511977,3.63030344322017,1.11189021922435,2.28270751335071,0.949058123089023,1.64698954724011,1.25667604400135,2.18852119245266,0.58489226135736,0,0.648414149624083,0,3.60369011810855,2.39921876480431,3.38123207019241,2.44381593414377,1.16371492300575,3.50679099451593,1.07502113111237,2.06654207171443,1.09899109488962,2.59134044235781,0.296452627087149,2.00214126859313,0.589676985339609,0.899448449539415,1.42002084971952,0.72353147925725,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,1.43768206527355,2.60498663367952,0.624075346229121,0.757736633841335,0.717589654087649,1.4473305640901,6.09685527549795,0.568474235311454,3.58522948172457,1.86719594352707,2.11221223459652,2.51259386162724,3.80869825417622,6.43941037930736,1.26108115284953,2.43611158613652,2.71073106717728,2.94953966488328,2.24490476425664,2.4590339958857,9.04747703635634,15.2293591469239,2.95058563811422,4.13905119457099,2.0871576698413,3.98519734413491,0.491804836130026,2.01976741763498,2.83957397474631,3.51394869866975,4.52389135238878,2.86762557543062,4.23317480756549,2.83076530788832,2.83367491172426,7.59865230569411,3.95287777946523,17.9939937196212,1.98716119291576,2.13678724400706,5.70104357737516,2.63952196756057,0,2.18502572539483,1.51161778482376,0.754420319023592,3.83892460745005,3.3817866273832,2.84271122485043,1.81766864738753,1.42598951353889,0.632073515871632,1.05418608574999,7.21948802737308,13.6175842301515,2.70091641046965,3.23396709456886,4.92975180572662,7.27094957933322,9.45354733290974,7.73380396829969,36.5357938937519,4.22409074514679,6.77862626764225,2.20528398054962,4.28704257647848,8.07322133479528,1.68876189798836,1.67121281604391,1.96969079694074,0.874442509889552,4.26478194624172,1.02522528478712,2.06386867963222,1.66675074632741,0.753473828018764,0.683471138605126,0.457556346413045,28.7263546689615,33.4483971053543,27.2253948394715,0,1.89801596148681,2.84647253977588,1.51207477150522,1.88179466413022,1.52853794622324,1.483507810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|phase1_expression=7.36684696682052,4.18770489167233,2.27499619694768,2.11724947914781,0.500895729946347,2.68606835059024,2.80335168714631,10.2007425518845,63.9180798568567,73.7303257914279,14.7247452673934,8.53562101250099,6.84802919724823,10.3156074854417,1.66554880907831,1.82227740650843,2.09868563438444,5.8360500591274,6.58149281307546,5.94145512517242,9.35476191661768,3.17731043842833,1.82839852397255,2.87986361028132,1.83527424853736,2.8711598205751,2.15380998079537,2.58565479223067,0.570070258369122,0.252030129759931,1.10865255327652,13.9706748161119,11.6862309641068,15.8481681015439,0.577703239502549,0.831173226792462,0.816677425049476,23.0192396905299,16.4080422349998,6.28228492768558,36.4703522579229,34.8353197328807,13.5942898848723,1.6366586336825,2.23029248682932,0.917733760808408,3.12956537739216,5.23260375313072,3.73466510648602,8.36048566019419,5.17949760013841,4.31257693094915,23.4895648480831,19.5847778343063,20.1656279485478,10.2903774414379,3.43840127926508,7.73508138416164,4.45096213891115,4.7609188134483,2.53532561402472,3.72728985276045,3.55717918444456,6.29929802096979,8.89979726310277,7.8152812644071,6.2916023208865,5.76327457982332,3.7328260431052,4.18518408828241,2.94454945891935,2.85650984403804,1.98781686856452,3.30725157880376,4.79227355091182,7.35375029288017,8.8092704799511,5.2351808614927,6.14426133024974,3.56092976871523,5.94669683415663,3.64639359389732,6.70039197603314,3.37657566019008,6.87592114995646,3.53554302568401,2.13557521198654,1.3047961207771,3.25622631332691,3.09843396437821,28.1168554040627,0,31.9586526842643,0,0,2.68816132258401,1.54488862144927,2.38602451609281,0.779358013808606,1.06001872353102,3.80277233397037,7.69958864485907,7.64415719119937,7.11066703153331,1.29894624606728,1.01343946190039,0.505524445014783,3.31133251185274,5.43769555659061,6.38301197978747,1.38788261412909,3.95805121805784,2.99800146432876,2.71300752994721,7.17291113527799,2.76466500925286,12.3597483867187,5.20557684911682,1.76922110389975,0.808834249737046,1.10420759230197,0,1.86391761218122,9.66176630138106,5.65506108396329,2.29911349687732,24.2026551501959,13.7977628128484,12.7070227073065,5.39246301857362,11.8950156732843,5.78010019719176,10.081810571152,5.37002460393694,6.85700547046548,4.54275536589721,6.11036183101898,2.23932547098167,3.0326731012041,5.6819301089348,2.08192708740326,2.29902104433473,2.88099407688559,1.80845781402858,4.76255494059295,2.43416068541215,2.34254311399322,7.76110112217047,2.15567992932842,1.70195472151037,2.46331573829528,2.6303487891309,3.05851974148158,2.089512999133,1.64625709126355,1.99034266818493,10.5331978096985,7.97778512055617,4.83077948972507,3.10688658803253,2.57978665979206,1.2604344302271,2.3674473558521,2.16440654922144,1.3884040159864,1.39520366850245,2.14618721119695,5.95503246072564,0.493679549740441,1.80584210487005,1.78351381000883,3.94739966048397,0.878200461164203,1.8788898626452,5.25724871410318,3.91037527041281,0.991256348951394,0.528901133327089,1.06644125267617,2.78684006232526,2.44848176511977,3.63030344322017,1.11189021922435,2.28270751335071,0.949058123089023,1.64698954724011,1.25667604400135,2.18852119245266,0.58489226135736,0,0.648414149624083,0,3.60369011810855,2.39921876480431,3.38123207019241,2.44381593414377,1.16371492300575,3.50679099451593,1.07502113111237,2.06654207171443,1.09899109488962,2.59134044235781,0.296452627087149,2.00214126859313,0.589676985339609,0.899448449539415,1.42002084971952,0.72353147925725,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,1.43768206527355,2.60498663367952,0.624075346229121,0.757736633841335,0.717589654087649,1.4473305640901,6.09685527549795,0.568474235311454,3.58522948172457,1.86719594352707,2.11221223459652,2.51259386162724,3.80869825417622,6.43941037930736,1.26108115284953,2.43611158613652,2.71073106717728,2.94953966488328,2.24490476425664,2.4590339958857,9.04747703635634,15.2293591469239,2.95058563811422,4.13905119457099,2.0871576698413,3.98519734413491,0.491804836130026,2.01976741763498,2.83957397474631,3.51394869866975,4.52389135238878,2.86762557543062,4.23317480756549,2.83076530788832,2.83367491172426,7.59865230569411,3.95287777946523,17.9939937196212,1.98716119291576,2.13678724400706,5.70104357737516,2.63952196756057,0,2.18502572539483,1.51161778482376,0.754420319023592,3.83892460745005,3.3817866273832,2.84271122485043,1.81766864738753,1.42598951353889,0.632073515871632,1.05418608574999,7.21948802737308,13.6175842301515,2.70091641046965,3.23396709456886,4.92975180572662,7.27094957933322,9.45354733290974,7.73380396829969,36.5357938937519,4.22409074514679,6.77862626764225,2.20528398054962,4.28704257647848,8.07322133479528,1.68876189798836,1.67121281604391,1.96969079694074,0.874442509889552,4.26478194624172,1.02522528478712,2.06386867963222,1.66675074632741,0.753473828018764,0.683471138605126,0.457556346413045,28.7263546689615,33.4483971053543,27.2253948394715,0,1.89801596148681,2.84647253977588,1.51207477150522,1.88179466413022,1.52853794622324,1.483507810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|short_description=p3@Per1
|short_description=p3@Per1
}}
}}

Latest revision as of 23:49, 1 October 2015

Short description:p3@Per1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Per1_5end
Coexpression cluster:NA
Association with transcript: -11bp_to_ENSMUST00000021271_5end
EntrezGene:Per1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Per1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E763.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F273.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G936.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H234.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.49
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D76.38
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A812.36
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.71
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D510.08
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C64.76
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E936.54
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.23
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E218.15
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.20
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C614.92
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system9.55e-1575
central nervous system1.02e-1473
ectoderm-derived structure1.61e-1395
ectoderm1.61e-1395
presumptive ectoderm1.61e-1395
brain3.46e-1347
future brain3.46e-1347
regional part of brain1.25e-1246
anterior neural tube3.55e-1240
regional part of forebrain5.89e-1239
forebrain5.89e-1239
future forebrain5.89e-1239
regional part of nervous system6.60e-1254
neural tube3.65e-1152
neural rod3.65e-1152
future spinal cord3.65e-1152
neural keel3.65e-1152
pre-chordal neural plate6.18e-1149
neurectoderm1.40e-1064
neural plate1.40e-1064
presumptive neural plate1.40e-1064
ecto-epithelium1.73e-1073
brain grey matter2.53e-0929
regional part of telencephalon2.53e-0929
telencephalon2.53e-0929
structure with developmental contribution from neural crest6.15e-0892
cerebral cortex7.91e-0821
cerebral hemisphere7.91e-0821
pallium7.91e-0821
gray matter1.31e-0734
regional part of cerebral cortex1.66e-0717
connective tissue4.62e-0746
occipital lobe8.75e-0710
visual cortex8.75e-0710
neocortex8.75e-0710
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