FFCP PHASE1:Hg19::chr10:72360327..72360336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5551 | |EntrezGene=5551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9360 | |HGNC=9360 | ||
|TSSclassifier=strong | |||
|UniProt=P14222 | |UniProt=P14222 | ||
|association_with_transcript=321bp_to_M28393,X13224_5end | |association_with_transcript=321bp_to_M28393,X13224_5end | ||
|cluster_id=chr10:72360327..72360336,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_6_at_PRF1_5end | |description=CAGE_peak_6_at_PRF1_5end | ||
|id=chr10:72360327..72360336,- | |id=chr10:72360327..72360336,- | ||
|ontology_enrichment_celltype=CL:0000791!3.15e-21!18;CL:0000789!3.15e-21!18;CL:0002420!3.15e-21!18;CL:0002419!3.15e-21!18;CL:0000790!3.15e-21!18;CL:0000084!9.51e-21!25;CL:0000827!9.51e-21!25;CL:0000625!1.66e-19!11;CL:0000838!3.80e-15!52;CL:0000542!8.85e-15!53;CL:0000051!8.85e-15!53;CL:0000080!9.62e-14!6;CL:0000623!1.33e-11!3;CL:0000825!1.33e-11!3;CL:0000767!5.23e-11!3;CL:0000842!6.85e-11!3;CL:0000988!8.64e-11!182;CL:0000738!9.46e-11!140;CL:0002087!2.89e-10!119;CL:0000037!5.26e-10!172;CL:0000566!5.26e-10!172;CL:0000224!2.89e-08!4;CL:0002032!4.73e-08!165;CL:0000837!4.73e-08!165;CL:0002031!7.61e-07!124 | |ontology_enrichment_celltype=CL:0000791!3.15e-21!18;CL:0000789!3.15e-21!18;CL:0002420!3.15e-21!18;CL:0002419!3.15e-21!18;CL:0000790!3.15e-21!18;CL:0000084!9.51e-21!25;CL:0000827!9.51e-21!25;CL:0000625!1.66e-19!11;CL:0000838!3.80e-15!52;CL:0000542!8.85e-15!53;CL:0000051!8.85e-15!53;CL:0000080!9.62e-14!6;CL:0000623!1.33e-11!3;CL:0000825!1.33e-11!3;CL:0000767!5.23e-11!3;CL:0000842!6.85e-11!3;CL:0000988!8.64e-11!182;CL:0000738!9.46e-11!140;CL:0002087!2.89e-10!119;CL:0000037!5.26e-10!172;CL:0000566!5.26e-10!172;CL:0000224!2.89e-08!4;CL:0002032!4.73e-08!165;CL:0000837!4.73e-08!165;CL:0002031!7.61e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.33e-35;11!CL:0000084;3.12e-27;25!CL:0000791;1.14e-21;18!CL:0000789;1.14e-21;18!CL:0002419;1.14e-21;18!CL:0000623;3.29e-16;3!CL:0000542;2.77e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.23e-35,11;CL:0000084,4.21e-27,25;CL:0000827,4.21e-27,25;CL:0000791,1.55e-21,18;CL:0000789,1.55e-21,18;CL:0002420,1.55e-21,18;CL:0002419,1.55e-21,18;CL:0000790,1.55e-21,18;CL:0000838,6.91e-20,52;CL:0000542,1.73e-19,53;CL:0000051,1.73e-19,53;CL:0000623,3.43e-16,3;CL:0000825,3.43e-16,3;CL:0002087,5.22e-10,115;CL:0000738,6.28e-10,136;CL:0002031,8.64e-08,120;CL:0000037,1.02e-07,168;CL:0000988,3.09e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.14e-21;18!CL:0000051;2.77e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.41e-42!15;UBERON:0000179!3.41e-42!15;UBERON:0000463!3.41e-42!15;UBERON:0002390!4.34e-10!102;UBERON:0003061!4.34e-10!102;UBERON:0002193!1.07e-09!112;UBERON:0004177!2.84e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.74e-35;15!UBERON:0000179;1.74e-35;15!UBERON:0000463;1.74e-35;15!UBERON:0002390;7.70e-15;32!UBERON:0002193;2.95e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-35,15;UBERON:0000179,1.28e-35,15;UBERON:0000463,1.28e-35,15 | |||
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| ||
|short_description=p6@PRF1 | |short_description=p6@PRF1 | ||
}} | }} |
Latest revision as of 02:25, 19 September 2015
Short description: | p6@PRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRF1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 321bp_to_M28393, X13224_5end |
EntrezGene: | PRF1 |
HGNC: | 9360 |
UniProt: | P14222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.23e-35 | 11 |
T cell | 4.21e-27 | 25 |
pro-T cell | 4.21e-27 | 25 |
mature alpha-beta T cell | 1.55e-21 | 18 |
alpha-beta T cell | 1.55e-21 | 18 |
immature T cell | 1.55e-21 | 18 |
mature T cell | 1.55e-21 | 18 |
immature alpha-beta T cell | 1.55e-21 | 18 |
lymphoid lineage restricted progenitor cell | 6.91e-20 | 52 |
lymphocyte | 1.73e-19 | 53 |
common lymphoid progenitor | 1.73e-19 | 53 |
natural killer cell | 3.43e-16 | 3 |
pro-NK cell | 3.43e-16 | 3 |
nongranular leukocyte | 5.22e-10 | 115 |
leukocyte | 6.28e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 8.64e-08 | 120 |
hematopoietic stem cell | 1.02e-07 | 168 |
hematopoietic cell | 3.09e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.28e-35 | 15 |
haemolymphatic fluid | 1.28e-35 | 15 |
organism substance | 1.28e-35 | 15 |