FFCP PHASE1:Hg19::chr10:70962416..70962434,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70962416..70962434,+ | |||
|coexpression_cluster_id=C3038 | |||
|description=CAGE_peak_at_chr10:70962416..70962434,+ | |description=CAGE_peak_at_chr10:70962416..70962434,+ | ||
|id=chr10:70962416..70962434,+ | |id=chr10:70962416..70962434,+ | ||
|ontology_enrichment_celltype=CL:0000077!5.23e-10!19 | |ontology_enrichment_celltype=CL:0000077!5.23e-10!19 | ||
|ontology_enrichment_celltype_v019=CL:0002127;8.64e-26;1!CL:0000911;8.64e-26;1!CL:0000814;8.64e-26;1!CL:0002521;1.19e-09;3!CL:0002586;1.19e-09;3!CL:0000569;1.31e-07;4!CL:0000149;1.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000893,1.55e-13,2;CL:0002489,1.55e-13,2;CL:0000809,1.55e-13,2;CL:0000808,1.55e-13,2;CL:0000894,1.55e-13,2;CL:0000806,1.55e-13,2;CL:0000807,1.55e-13,2;CL:0000805,1.55e-13,2;CL:0002425,1.55e-13,2;CL:0002586,1.19e-09,3;CL:0002521,1.30e-09,3;CL:0000569,1.31e-07,4;CL:0000011,1.31e-07,4;CL:0000149,1.49e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002425;1.29e-13;2!CL:0000011;1.31e-07;4 | |||
|ontology_enrichment_disease=DOID:170!3.09e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.64e-26;1!DOID:0070004;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.93e-26,1;DOID:0070004,5.93e-26,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.19e-09;3!UBERON:0002190;1.19e-09;3!UBERON:0001782;1.19e-09;3!UBERON:0001013;4.74e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.19e-09,3;UBERON:0005424,1.19e-09,3;UBERON:0002190,1.30e-09,3;UBERON:0001013,4.82e-08,14;UBERON:0001781,1.49e-07,4;UBERON:0002370,2.04e-07,4;UBERON:0005058,2.04e-07,4;UBERON:0009113,2.04e-07,4;UBERON:0003295,2.04e-07,4;UBERON:0005562,2.04e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0.664653872707185,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0,1.16856654923612,0,0,0,0,7.7805623254954,0.151230923763239,0,0,0,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0.214441591374926,0.521988583930423,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88163833869832,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60302715731442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0.664653872707185,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0,0,0,0,0,1.16856654923612,0,0,0,0,7.7805623254954,0.151230923763239,0,0,0,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0.214441591374926,0.521988583930423,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88163833869832,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr10:70962416..70962434,+ | |short_description=p@chr10:70962416..70962434,+ | ||
}} | }} |
Latest revision as of 15:05, 23 July 2015
Short description: | p@chr10:70962416..70962434, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70962416..70962434, + |
Coexpression cluster: | C3038_mesenchymal_hepatoma_transitionalcell_mesothelioma_Retinal_cholangiocellular_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.26e-25 | 1 |
immature NK T cell | 1.26e-25 | 1 |
effector T cell | 1.26e-25 | 1 |
mature NK T cell | 1.26e-25 | 1 |
immature NK T cell stage IV | 1.26e-25 | 1 |
immature NK T cell stage I | 1.26e-25 | 1 |
immature NK T cell stage II | 1.26e-25 | 1 |
immature NK T cell stage III | 1.26e-25 | 1 |
thymocyte | 1.55e-13 | 2 |
double negative thymocyte | 1.55e-13 | 2 |
double-positive, alpha-beta thymocyte | 1.55e-13 | 2 |
DN4 thymocyte | 1.55e-13 | 2 |
DN1 thymic pro-T cell | 1.55e-13 | 2 |
DN2 thymocyte | 1.55e-13 | 2 |
DN3 thymocyte | 1.55e-13 | 2 |
immature single positive thymocyte | 1.55e-13 | 2 |
early T lineage precursor | 1.55e-13 | 2 |
retinal pigment epithelial cell | 1.19e-09 | 3 |
subcutaneous fat cell | 1.30e-09 | 3 |
cardiac mesenchymal cell | 1.31e-07 | 4 |
migratory trunk neural crest cell | 1.31e-07 | 4 |
visual pigment cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.19e-09 | 3 |
presumptive retinal pigmented epithelium | 1.19e-09 | 3 |
subcutaneous adipose tissue | 1.30e-09 | 3 |
adipose tissue | 4.82e-08 | 14 |
layer of retina | 1.49e-07 | 4 |
thymus | 2.04e-07 | 4 |
hemolymphoid system gland | 2.04e-07 | 4 |
thymic region | 2.04e-07 | 4 |
pharyngeal gland | 2.04e-07 | 4 |
thymus primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.93e-26 | 1 |
myeloma | 5.93e-26 | 1 |