FFCP PHASE1:Hg19::chr10:6622258..6622263,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5588 | |EntrezGene=5588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9410 | |HGNC=9410 | ||
|TSSclassifier=strong | |||
|UniProt=Q04759 | |UniProt=Q04759 | ||
|association_with_transcript=0bp_to_ENST00000263125_5end | |association_with_transcript=0bp_to_ENST00000263125_5end | ||
|cluster_id=chr10:6622258..6622263,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_7_at_PRKCQ_5end | |description=CAGE_peak_7_at_PRKCQ_5end | ||
|id=chr10:6622258..6622263,- | |id=chr10:6622258..6622263,- | ||
|ontology_enrichment_celltype=CL:0000791!3.51e-23!18;CL:0000789!3.51e-23!18;CL:0002420!3.51e-23!18;CL:0002419!3.51e-23!18;CL:0000790!3.51e-23!18;CL:0000084!7.13e-19!25;CL:0000827!7.13e-19!25;CL:0000625!1.00e-13!11;CL:0000838!1.64e-11!52;CL:0000542!3.76e-11!53;CL:0000051!3.76e-11!53;CL:0000037!6.65e-11!172;CL:0000566!6.65e-11!172;CL:0000988!5.24e-10!182;CL:0000624!6.52e-10!6;CL:0002032!1.20e-08!165;CL:0000837!1.20e-08!165 | |ontology_enrichment_celltype=CL:0000791!3.51e-23!18;CL:0000789!3.51e-23!18;CL:0002420!3.51e-23!18;CL:0002419!3.51e-23!18;CL:0000790!3.51e-23!18;CL:0000084!7.13e-19!25;CL:0000827!7.13e-19!25;CL:0000625!1.00e-13!11;CL:0000838!1.64e-11!52;CL:0000542!3.76e-11!53;CL:0000051!3.76e-11!53;CL:0000037!6.65e-11!172;CL:0000566!6.65e-11!172;CL:0000988!5.24e-10!182;CL:0000624!6.52e-10!6;CL:0002032!1.20e-08!165;CL:0000837!1.20e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.86e-20;18!CL:0000789;2.86e-20;18!CL:0002419;2.86e-20;18!CL:0000625;2.51e-17;11!CL:0000084;2.20e-14;25!CL:0000226;3.24e-11;3!CL:0000842;3.24e-11;3!CL:0002032;4.90e-09;1!CL:0000557;4.90e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.34e-20,18;CL:0000789,1.34e-20,18;CL:0002420,1.34e-20,18;CL:0002419,1.34e-20,18;CL:0000790,1.34e-20,18;CL:0000625,1.18e-17,11;CL:0000084,1.29e-14,25;CL:0000827,1.29e-14,25;CL:0000226,7.74e-11,3;CL:0000842,7.74e-11,3;CL:0000838,1.48e-08,52;CL:0000542,2.25e-08,53;CL:0000051,2.25e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.86e-20;18 | |||
|ontology_enrichment_disease=DOID:8692!4.19e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.68e-09!115;UBERON:0004177!3.61e-07!7;UBERON:0002370!3.74e-07!4;UBERON:0005058!3.74e-07!4;UBERON:0009113!3.74e-07!4;UBERON:0003295!3.74e-07!4;UBERON:0005562!3.74e-07!4;UBERON:0000178!8.30e-07!15;UBERON:0000179!8.30e-07!15;UBERON:0000463!8.30e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.35e-16;2!UBERON:0005058;2.35e-16;2!UBERON:0009113;2.35e-16;2!UBERON:0002390;1.71e-07;32!UBERON:0004177;4.55e-07;5!UBERON:0005057;4.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.76e-09,4;UBERON:0005058,5.76e-09,4;UBERON:0009113,5.76e-09,4;UBERON:0003295,5.76e-09,4;UBERON:0005562,5.76e-09,4 | |||
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| ||
|short_description=p7@PRKCQ | |short_description=p7@PRKCQ | ||
}} | }} |
Latest revision as of 21:20, 18 September 2015
Short description: | p7@PRKCQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKCQ_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000263125_5end |
EntrezGene: | PRKCQ |
HGNC: | 9410 |
UniProt: | Q04759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.34e-20 | 18 |
alpha-beta T cell | 1.34e-20 | 18 |
immature T cell | 1.34e-20 | 18 |
mature T cell | 1.34e-20 | 18 |
immature alpha-beta T cell | 1.34e-20 | 18 |
CD8-positive, alpha-beta T cell | 1.18e-17 | 11 |
T cell | 1.29e-14 | 25 |
pro-T cell | 1.29e-14 | 25 |
single nucleate cell | 7.74e-11 | 3 |
mononuclear cell | 7.74e-11 | 3 |
lymphoid lineage restricted progenitor cell | 1.48e-08 | 52 |
lymphocyte | 2.25e-08 | 53 |
common lymphoid progenitor | 2.25e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.76e-09 | 4 |
hemolymphoid system gland | 5.76e-09 | 4 |
thymic region | 5.76e-09 | 4 |
pharyngeal gland | 5.76e-09 | 4 |
thymus primordium | 5.76e-09 | 4 |