FFCP PHASE1:Mm9::chr15:58720626..58720706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75841 | |EntrezGene=75841 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q7TMV1 | |UniProt=Q7TMV1 | ||
|association_with_transcript=-77bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end | |association_with_transcript=-77bp_to_ENSMUST00000036904,NM_175226,uc007vtq.2_5end | ||
|cluster_id=chr15:58720626..58720706,+ | |||
|description=CAGE_peak_1_at_Rnf139_5end | |description=CAGE_peak_1_at_Rnf139_5end | ||
|id=chr15:58720626..58720706,+ | |id=chr15:58720626..58720706,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.36e-11!25;CL:0000988!5.33e-10!32;CL:0002032!5.33e-10!32;CL:0000037!5.33e-10!32;CL:0000566!5.33e-10!32;CL:0000837!5.33e-10!32;CL:0002320!1.82e-07!46;CL:0000134!1.82e-07!46;CL:0000838!3.36e-07!12;CL:0000542!5.62e-07!13;CL:0000051!5.62e-07!13;CL:0000738!6.69e-07!17;CL:0002087!6.69e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.36e-11,25;CL:0000988,5.33e-10,32;CL:0002032,5.33e-10,32;CL:0000037,5.33e-10,32;CL:0000837,5.33e-10,32;CL:0002320,1.82e-07,46;CL:0000134,1.82e-07,46;CL:0000838,3.36e-07,12;CL:0000542,5.62e-07,13;CL:0000051,5.62e-07,13;CL:0000738,6.69e-07,17;CL:0002087,6.69e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.13e-09!32;UBERON:0003081!5.38e-09!88;UBERON:0000914!5.88e-08!17;UBERON:0000926!7.12e-08!193;UBERON:0004120!7.12e-08!193;UBERON:0006603!7.12e-08!193;UBERON:0002384!1.82e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.97e-09,87;UBERON:0002204,4.13e-09,32;UBERON:0000926,7.06e-09,120;UBERON:0004120,7.06e-09,120;UBERON:0006603,7.06e-09,120;UBERON:0002384,1.82e-07,46 | |||
|phase1_expression=12.4916100741739,4.53668029931169,6.82498859084304,4.83942738090928,6.51164448930251,6.37941233265181,5.84031601488814,17.3025253411712,10.2775767170717,9.36258105287974,12.3276937122364,12.1253681672911,19.6880839420887,13.7250031797826,20.6528052325711,16.8054471933556,18.1886088313318,18.9277299214943,16.7279608999001,15.7024171165271,4.67738095830884,8.24114894967348,8.097193463307,6.07971206614945,7.34109699414944,5.16808767703518,4.73838195774982,3.23206849028834,4.75058548640935,6.30075324399827,4.6563407237614,8.89042942843484,7.38077745101484,15.8481681015439,6.06588401477677,5.48574329683025,3.26670970019791,15.0671387065287,22.6587249911902,10.470474879476,17.0587131528994,12.9778642142105,16.5073520030592,10.1976422560218,11.5569701590247,11.1963518818626,8.60630478782843,2.18025156380447,3.73466510648602,4.27745777963423,3.21968769738334,1.43752564364972,20.1339127269284,16.6833292662609,15.7964085596958,9.00408026125814,7.73640287834643,10.3134418455488,5.66486090406874,4.23192783417626,2.53532561402472,2.37191172448392,4.4464739805557,7.19919773825119,2.96659908770092,4.9733608046227,4.79360176829448,6.53171119046643,2.7996195323289,2.8351247049655,2.94454945891935,5.99867067247988,5.30084498283872,3.30725157880376,2.77951865952885,4.5960939330501,1.10115880999389,5.36286819957788,3.84016333140609,4.08847491963601,3.7509933876988,3.64639359389732,3.90856198601933,4.50210088025344,3.66715794664344,7.95497180778903,6.40672563595963,5.96478226640962,8.17842887998388,8.16172849153284,7.8263411949453,6.88339101585109,7.47968467078526,5.39703191637817,7.14754059192436,4.03224198387602,6.60088774619234,7.83979483859066,11.6903702071291,8.83348936275851,14.6477156567748,6.41632387071589,10.1922095882658,42.6640021891999,5.19578498426914,4.30711771307668,7.07734223020697,6.50848114398642,5.95557132388495,5.49235914539852,5.03107447621794,5.48037860961854,3.22861696158482,6.17962826265753,8.46638691377075,6.28332956648377,7.41584903203122,4.48258006451726,11.4999371753484,13.426648545635,10.3795513676385,11.1521308221101,1.86391761218122,4.68449275218475,2.51336048176146,7.15279754584056,11.0229914545447,3.59941638596045,9.53026703047985,2.09706895166752,4.11750542536764,3.14135880282161,5.04090528557602,3.83573185995496,3.32460871295296,4.70499662896497,9.87841829348068,7.0911973247753,8.08712826987759,6.52369753248069,3.77349284591841,5.28774840196988,6.84236093260327,6.78171680260718,7.48401490664606,5.25266253167884,6.09061209638237,5.95017752699736,2.37124792226126,2.83659120251729,4.39877810409872,5.91828477554452,6.11703948296315,3.83077383174383,4.52720700097476,6.56813080501028,2.80885274925294,6.17634977075316,8.80906848126337,7.04227626620706,5.39409937956521,6.84235833551856,9.70653415899362,7.28027657465394,6.94202007993202,5.11574678450897,8.58474884478781,12.4938916332871,9.2153515951549,9.68588038066662,10.7821516695988,7.74859933354261,6.36695334344047,11.8101648509127,3.57492912559016,3.80747065803352,2.97376904685418,3.17340679996253,6.82522401712749,5.80591679651096,5.7990357594942,6.45387278794696,4.66993892074228,4.56541502670142,5.21981967698963,6.58795818896044,7.54005626400809,7.36138946552258,6.82374304916921,0.898819408654221,4.10662294761919,2.98711909881551,4.93136542478012,3.99869794134051,6.76246414038483,5.49858585182348,5.43066964069352,7.36426108848345,7.58838445491087,5.31396532726568,5.80895293013087,7.28043267138623,5.92905254174298,6.00642380577939,8.64859578498093,7.42044970870017,10.7515864335907,10.6117950291063,7.63877555344259,8.91858026097513,9.56597837972709,5.76578967694971,23.0029130443767,7.07067800570156,5.61667811606209,3.28352541331245,5.38192240565737,4.82443521363367,7.944387177164,4.16881105895066,4.72598431681875,4.41337223015489,5.63256595892405,4.69017520837084,6.66522194480839,12.6836871107569,8.98520321405289,6.2010113101657,7.97273843287435,6.55453258862952,9.15230403889247,7.66640010482011,15.0791283939272,11.9659250440116,2.45882136509518,4.41498794087572,3.05046120976805,4.92289083687253,7.70494243270374,9.08895337935743,7.88770548540642,4.29482618726302,6.89354872744957,6.4521575447189,5.79276552614225,5.66153061577665,4.04810701674894,5.26060544240361,5.92931666919785,5.14114106274891,7.94864477166304,3.91744328067962,9.93610452056814,5.77395430403874,1.32745138339963,7.76898035695941,5.44182402536552,5.46954731292105,6.20133975049623,4.91896236710284,8.26970538138308,7.99774204850512,6.41695281092498,6.0046984007805,5.27093042874994,4.12542172992747,6.46835250932197,6.66226047915848,7.24408629183425,6.85878512101095,10.1083933176096,6.95638388648075,7.73380396829969,9.74287837166718,9.62154003061212,10.1679394014634,5.73373834942901,6.43056386471772,7.58882805470756,5.66941494324665,5.37175548014114,4.92422699235184,4.95517422270746,5.00648315428376,11.1066072518604,3.09580301944834,4.44466865687308,11.1137389632768,9.15851325730869,9.83746144788047,17.3377998593732,16.0944170172207,16.7221968303353,3.81868247206045,6.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| |phase1_expression=12.4916100741739,4.53668029931169,6.82498859084304,4.83942738090928,6.51164448930251,6.37941233265181,5.84031601488814,17.3025253411712,10.2775767170717,9.36258105287974,12.3276937122364,12.1253681672911,19.6880839420887,13.7250031797826,20.6528052325711,16.8054471933556,18.1886088313318,18.9277299214943,16.7279608999001,15.7024171165271,4.67738095830884,8.24114894967348,8.097193463307,6.07971206614945,7.34109699414944,5.16808767703518,4.73838195774982,3.23206849028834,4.75058548640935,6.30075324399827,4.6563407237614,8.89042942843484,7.38077745101484,15.8481681015439,6.06588401477677,5.48574329683025,3.26670970019791,15.0671387065287,22.6587249911902,10.470474879476,17.0587131528994,12.9778642142105,16.5073520030592,10.1976422560218,11.5569701590247,11.1963518818626,8.60630478782843,2.18025156380447,3.73466510648602,4.27745777963423,3.21968769738334,1.43752564364972,20.1339127269284,16.6833292662609,15.7964085596958,9.00408026125814,7.73640287834643,10.3134418455488,5.66486090406874,4.23192783417626,2.53532561402472,2.37191172448392,4.4464739805557,7.19919773825119,2.96659908770092,4.9733608046227,4.79360176829448,6.53171119046643,2.7996195323289,2.8351247049655,2.94454945891935,5.99867067247988,5.30084498283872,3.30725157880376,2.77951865952885,4.5960939330501,1.10115880999389,5.36286819957788,3.84016333140609,4.08847491963601,3.7509933876988,3.64639359389732,3.90856198601933,4.50210088025344,3.66715794664344,7.95497180778903,6.40672563595963,5.96478226640962,8.17842887998388,8.16172849153284,7.8263411949453,6.88339101585109,7.47968467078526,5.39703191637817,7.14754059192436,4.03224198387602,6.60088774619234,7.83979483859066,11.6903702071291,8.83348936275851,14.6477156567748,6.41632387071589,10.1922095882658,42.6640021891999,5.19578498426914,4.30711771307668,7.07734223020697,6.50848114398642,5.95557132388495,5.49235914539852,5.03107447621794,5.48037860961854,3.22861696158482,6.17962826265753,8.46638691377075,6.28332956648377,7.41584903203122,4.48258006451726,11.4999371753484,13.426648545635,10.3795513676385,11.1521308221101,1.86391761218122,4.68449275218475,2.51336048176146,7.15279754584056,11.0229914545447,3.59941638596045,9.53026703047985,2.09706895166752,4.11750542536764,3.14135880282161,5.04090528557602,3.83573185995496,3.32460871295296,4.70499662896497,9.87841829348068,7.0911973247753,8.08712826987759,6.52369753248069,3.77349284591841,5.28774840196988,6.84236093260327,6.78171680260718,7.48401490664606,5.25266253167884,6.09061209638237,5.95017752699736,2.37124792226126,2.83659120251729,4.39877810409872,5.91828477554452,6.11703948296315,3.83077383174383,4.52720700097476,6.56813080501028,2.80885274925294,6.17634977075316,8.80906848126337,7.04227626620706,5.39409937956521,6.84235833551856,9.70653415899362,7.28027657465394,6.94202007993202,5.11574678450897,8.58474884478781,12.4938916332871,9.2153515951549,9.68588038066662,10.7821516695988,7.74859933354261,6.36695334344047,11.8101648509127,3.57492912559016,3.80747065803352,2.97376904685418,3.17340679996253,6.82522401712749,5.80591679651096,5.7990357594942,6.45387278794696,4.66993892074228,4.56541502670142,5.21981967698963,6.58795818896044,7.54005626400809,7.36138946552258,6.82374304916921,0.898819408654221,4.10662294761919,2.98711909881551,4.93136542478012,3.99869794134051,6.76246414038483,5.49858585182348,5.43066964069352,7.36426108848345,7.58838445491087,5.31396532726568,5.80895293013087,7.28043267138623,5.92905254174298,6.00642380577939,8.64859578498093,7.42044970870017,10.7515864335907,10.6117950291063,7.63877555344259,8.91858026097513,9.56597837972709,5.76578967694971,23.0029130443767,7.07067800570156,5.61667811606209,3.28352541331245,5.38192240565737,4.82443521363367,7.944387177164,4.16881105895066,4.72598431681875,4.41337223015489,5.63256595892405,4.69017520837084,6.66522194480839,12.6836871107569,8.98520321405289,6.2010113101657,7.97273843287435,6.55453258862952,9.15230403889247,7.66640010482011,15.0791283939272,11.9659250440116,2.45882136509518,4.41498794087572,3.05046120976805,4.92289083687253,7.70494243270374,9.08895337935743,7.88770548540642,4.29482618726302,6.89354872744957,6.4521575447189,5.79276552614225,5.66153061577665,4.04810701674894,5.26060544240361,5.92931666919785,5.14114106274891,7.94864477166304,3.91744328067962,9.93610452056814,5.77395430403874,1.32745138339963,7.76898035695941,5.44182402536552,5.46954731292105,6.20133975049623,4.91896236710284,8.26970538138308,7.99774204850512,6.41695281092498,6.0046984007805,5.27093042874994,4.12542172992747,6.46835250932197,6.66226047915848,7.24408629183425,6.85878512101095,10.1083933176096,6.95638388648075,7.73380396829969,9.74287837166718,9.62154003061212,10.1679394014634,5.73373834942901,6.43056386471772,7.58882805470756,5.66941494324665,5.37175548014114,4.92422699235184,4.95517422270746,5.00648315428376,11.1066072518604,3.09580301944834,4.44466865687308,11.1137389632768,9.15851325730869,9.83746144788047,17.3377998593732,16.0944170172207,16.7221968303353,3.81868247206045,6.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| ||
|short_description=p1@Rnf139 | |short_description=p1@Rnf139 | ||
}} | }} |
Latest revision as of 20:41, 26 September 2015
Short description: | p1@Rnf139 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf139_5end |
Coexpression cluster: | NA |
Association with transcript: | -77bp_to_ENSMUST00000036904, NM_175226, uc007vtq.2_5end |
EntrezGene: | Rnf139 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.36e-11 | 25 |
hematopoietic cell | 5.33e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.33e-10 | 32 |
hematopoietic stem cell | 5.33e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.33e-10 | 32 |
connective tissue cell | 1.82e-07 | 46 |
mesenchymal cell | 1.82e-07 | 46 |
lymphoid lineage restricted progenitor cell | 3.36e-07 | 12 |
lymphocyte | 5.62e-07 | 13 |
common lymphoid progenitor | 5.62e-07 | 13 |
leukocyte | 6.69e-07 | 17 |
nongranular leukocyte | 6.69e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.97e-09 | 87 |
musculoskeletal system | 4.13e-09 | 32 |
mesoderm | 7.06e-09 | 120 |
mesoderm-derived structure | 7.06e-09 | 120 |
presumptive mesoderm | 7.06e-09 | 120 |
connective tissue | 1.82e-07 | 46 |