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FFCP PHASE1:Mm9::chr15:48623529..48623544,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=239420
|EntrezGene=239420
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80T79,E0CX68
|UniProt=Q80T79,E0CX68
|association_with_transcript=0bp_to_ENSMUST00000022923,ENSMUST00000100670,ENSMUST00000160655,ENSMUST00000160716,NM_001081391,uc007vqu.2,uc007vqv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000022923,ENSMUST00000100670,ENSMUST00000160655,ENSMUST00000160716,NM_001081391,uc007vqu.2,uc007vqv.1_5end
|cluster_id=chr15:48623529..48623544,-
|description=CAGE_peak_1_at_Csmd3_5end
|description=CAGE_peak_1_at_Csmd3_5end
|id=chr15:48623529..48623544,-
|id=chr15:48623529..48623544,-
|ontology_enrichment_celltype=CL:0000540!3.79e-11!33;CL:0000047!3.79e-11!33;CL:0000031!3.79e-11!33;CL:0000404!3.79e-11!33;CL:0000117!3.19e-10!23;CL:0000337!3.19e-10!23;CL:0000221!2.34e-08!44;CL:0000133!2.34e-08!44;CL:0002319!2.67e-08!43;CL:0000393!1.43e-07!39;CL:0000211!1.43e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,4.56e-12,33;CL:0000047,4.56e-12,33;CL:0000031,4.56e-12,33;CL:0000404,4.56e-12,33;CL:0000117,1.49e-11,23;CL:0000337,1.49e-11,23;CL:0000393,7.25e-09,39;CL:0000211,7.25e-09,39;CL:0000221,1.54e-07,44;CL:0000133,1.54e-07,44;CL:0002319,1.83e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.66e-22!73;UBERON:0005743!2.66e-22!73;UBERON:0000073!1.35e-21!75;UBERON:0001016!1.35e-21!75;UBERON:0002346!1.50e-20!71;UBERON:0003075!1.50e-20!71;UBERON:0007284!1.50e-20!71;UBERON:0001049!1.72e-18!52;UBERON:0005068!1.72e-18!52;UBERON:0006241!1.72e-18!52;UBERON:0007135!1.72e-18!52;UBERON:0000033!2.38e-18!63;UBERON:0004121!2.38e-18!102;UBERON:0000924!2.38e-18!102;UBERON:0006601!2.38e-18!102;UBERON:0000955!1.97e-17!50;UBERON:0006238!1.97e-17!50;UBERON:0002616!1.02e-16!49;UBERON:0002020!4.52e-16!34;UBERON:0003056!9.14e-16!49;UBERON:0002791!3.21e-13!29;UBERON:0003528!3.21e-13!29;UBERON:0001893!3.21e-13!29;UBERON:0003080!3.30e-13!40;UBERON:0002780!1.57e-12!39;UBERON:0001890!1.57e-12!39;UBERON:0006240!1.57e-12!39;UBERON:0000956!4.78e-09!21;UBERON:0001869!4.78e-09!21;UBERON:0000203!4.78e-09!21;UBERON:0002619!3.69e-08!17;UBERON:0000153!3.71e-08!94;UBERON:0002021!8.07e-08!10;UBERON:0000411!8.07e-08!10;UBERON:0001950!8.07e-08!10;UBERON:0000468!9.90e-08!333;UBERON:0007811!1.92e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.31e-22,64;UBERON:0003075,1.31e-22,64;UBERON:0007284,1.31e-22,64;UBERON:0001017,1.92e-22,73;UBERON:0001016,3.93e-21,75;UBERON:0000073,8.73e-20,54;UBERON:0004121,6.04e-19,95;UBERON:0000924,6.04e-19,95;UBERON:0006601,6.04e-19,95;UBERON:0001049,1.67e-18,52;UBERON:0005068,1.67e-18,52;UBERON:0006241,1.67e-18,52;UBERON:0007135,1.67e-18,52;UBERON:0002020,1.79e-17,34;UBERON:0010371,1.80e-17,73;UBERON:0003056,2.64e-16,49;UBERON:0000955,2.41e-15,47;UBERON:0006238,2.41e-15,47;UBERON:0002616,1.39e-14,46;UBERON:0003528,3.25e-14,29;UBERON:0002791,3.25e-14,29;UBERON:0001893,3.25e-14,29;UBERON:0003080,2.24e-13,40;UBERON:0002780,1.26e-12,39;UBERON:0001890,1.26e-12,39;UBERON:0006240,1.26e-12,39;UBERON:0010314,1.13e-11,92;UBERON:0000956,1.86e-09,21;UBERON:0001869,1.86e-09,21;UBERON:0000203,1.86e-09,21;UBERON:0002021,8.76e-09,10;UBERON:0000411,8.76e-09,10;UBERON:0001950,8.76e-09,10;UBERON:0002619,2.08e-08,17
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,0,0,0,20.750562796861,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,1.03134418455488,16.7922662513466,13.7537654610729,19.6487735086916,0,0,0,0,0,1.19840044207362,1.15265491596466,5.91030790158323,2.70011876663381,3.99617426567626,27.4224945027651,23.8538024227743,11.1466627285608,4.50473713785711,4.5960939330501,71.5753226496027,55.1609300528011,70.8126118311282,17.013331117195,22.4144726825904,25.5247551572812,26.8015679041326,64.1549375436115,59.4385183851791,89.2724613985213,89.2670438610375,40.4486797440902,0.227178579999552,0.226714680320357,0,0,0,0,0,0,1.68533304158102,0,0,0,2.25349471642689,0,0,0,0,0,0,2.2836775943812,0,0.593768556259299,1.38788261412909,1.21786191324856,0.691846491768175,0.904335843315735,1.17588707135705,0,0,0,0,0.808834249737046,0.220841518460394,0,0,51.2366394770208,45.0310419648928,0.255457055208591,0,0,0,146.645035977321,156.46520616397,33.2984033099091,119.243483651902,121.976273146568,96.4136526756359,120.545258459344,0.916554274652847,0,0,9.46988351489133,4.55421550369463,5.28774840196988,10.4436035287103,12.9606143338715,8.02830689985669,9.48041530107888,8.24575176125614,36.4771752742012,0.431135985865684,3.59301552318857,4.39877810409872,3.72632745126877,17.7950239504383,7.3132954969655,7.40815691068596,0.796137067273973,0,0,0,0.621377317606506,1.64168241986767,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0.232533944750408,1.07309360559848,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0,134.795857029606,29.2249099157168,0,0.264450566663544,2.34617075588757,2.32236671860439,3.22168653305233,5.24377164020691,4.22518283305254,4.1849637744763,0,1.64698954724011,2.5133520880027,1.59165177632921,1.16978452271472,0,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0.592905254174298,0.500535317148282,0.982794975566015,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,2.87536413054709,2.97712758134803,0.936113019343682,0.505157755894224,0,0.482443521363367,0,2.27389694124582,1.79261474086228,1.69745085775188,1.17345124144251,1.00503754465089,0.238043640886014,0.195133647857799,3.15270288212382,1.99318220683897,0.797273843287435,0.163863314715738,0.172684981865896,0,0,0,0,0,100.986321102321,85.9161662720849,0,0,4.73262329124385,7.41833614163613,12.9254038639679,1.67278158566786,1.78238939265915,2.26461224631066,7.2865926301481,10.2289550268959,5.92931666919785,136.240238162846,0.283880170416537,1.42452482933804,2.44330439030364,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,1.22974059177571,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0,2.34079422240703,0.258717367565509,0.428674070063185,3.90148514013002,2.14042581122485,2.30368628842969,0.304464949114599,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0.291480836629851,117.559641474663,4.61351378154202,5.77883230297023,11.8524497516615,6.78126445216888,5.74115756428306,5.0331198105435,0,0,0,0,1.42351197111511,4.67634774391752,4.32021363287205,3.3454127362315,2.83871332870031,1.88810084938749,0.578574190077352,0.26175594198403,0,0,0,0.747582730219894,1.98550188548517,4.86127970860119,2.45403664607689,4.56181538825101,3.99014611395563,0.2604087696879,0,0.724752362478018,0,0,1.01362607645082,0.924398614483445,0.389762468933385,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0.386379188064381,0,0,0,0,108.432353782477,97.1286249030143,98.5380283115762,52.4152206148247,95.9115527678899,96.6904188658817,84.3778125289757,102.222913131898,110.113605383162,90.0902942448167,0.830298780673413,18.7541690498485,16.9026269696593,19.6916440825318,4.40187641518763,7.90527086335061,22.6691662357648,23.6940315824728,25.6735367673452,17.9415020352296,26.3618471885849,24.8986770629621,19.3837920462657,19.9118223979143,17.2880761556396,27.6250340944183,17.3826488917283,15.8185560780238,18.5438655361488,20.75504773895,19.8864166383541,23.9592338315106,15.4983523465759,21.9473089114816,20.6099543109574,19.884432854544,19.5732930973867,25.7808317209086,16.4322977753493,19.0788372363631,17.4393476642536,15.7607171800902,20.8707832016542,14.4091262302948,16.7828751553593,23.4821943261669,13.1001700729429,16.9748132698156,12.6250299165437,3.97064554415128,3.94175320554716
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,0,0,0,20.750562796861,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,1.03134418455488,16.7922662513466,13.7537654610729,19.6487735086916,0,0,0,0,0,1.19840044207362,1.15265491596466,5.91030790158323,2.70011876663381,3.99617426567626,27.4224945027651,23.8538024227743,11.1466627285608,4.50473713785711,4.5960939330501,71.5753226496027,55.1609300528011,70.8126118311282,17.013331117195,22.4144726825904,25.5247551572812,26.8015679041326,64.1549375436115,59.4385183851791,89.2724613985213,89.2670438610375,40.4486797440902,0.227178579999552,0.226714680320357,0,0,0,0,0,0,1.68533304158102,0,0,0,2.25349471642689,0,0,0,0,0,0,2.2836775943812,0,0.593768556259299,1.38788261412909,1.21786191324856,0.691846491768175,0.904335843315735,1.17588707135705,0,0,0,0,0.808834249737046,0.220841518460394,0,0,51.2366394770208,45.0310419648928,0.255457055208591,0,0,0,146.645035977321,156.46520616397,33.2984033099091,119.243483651902,121.976273146568,96.4136526756359,120.545258459344,0.916554274652847,0,0,9.46988351489133,4.55421550369463,5.28774840196988,10.4436035287103,12.9606143338715,8.02830689985669,9.48041530107888,8.24575176125614,36.4771752742012,0.431135985865684,3.59301552318857,4.39877810409872,3.72632745126877,17.7950239504383,7.3132954969655,7.40815691068596,0.796137067273973,0,0,0,0.621377317606506,1.64168241986767,0.720248245844059,0.23674473558521,0.196764231747404,0.771335564436891,0.232533944750408,1.07309360559848,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0,134.795857029606,29.2249099157168,0,0.264450566663544,2.34617075588757,2.32236671860439,3.22168653305233,5.24377164020691,4.22518283305254,4.1849637744763,0,1.64698954724011,2.5133520880027,1.59165177632921,1.16978452271472,0,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0.592905254174298,0.500535317148282,0.982794975566015,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,2.87536413054709,2.97712758134803,0.936113019343682,0.505157755894224,0,0.482443521363367,0,2.27389694124582,1.79261474086228,1.69745085775188,1.17345124144251,1.00503754465089,0.238043640886014,0.195133647857799,3.15270288212382,1.99318220683897,0.797273843287435,0.163863314715738,0.172684981865896,0,0,0,0,0,100.986321102321,85.9161662720849,0,0,4.73262329124385,7.41833614163613,12.9254038639679,1.67278158566786,1.78238939265915,2.26461224631066,7.2865926301481,10.2289550268959,5.92931666919785,136.240238162846,0.283880170416537,1.42452482933804,2.44330439030364,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,1.22974059177571,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0,2.34079422240703,0.258717367565509,0.428674070063185,3.90148514013002,2.14042581122485,2.30368628842969,0.304464949114599,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0.291480836629851,117.559641474663,4.61351378154202,5.77883230297023,11.8524497516615,6.78126445216888,5.74115756428306,5.0331198105435,0,0,0,0,1.42351197111511,4.67634774391752,4.32021363287205,3.3454127362315,2.83871332870031,1.88810084938749,0.578574190077352,0.26175594198403,0,0,0,0.747582730219894,1.98550188548517,4.86127970860119,2.45403664607689,4.56181538825101,3.99014611395563,0.2604087696879,0,0.724752362478018,0,0,1.01362607645082,0.924398614483445,0.389762468933385,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0.386379188064381,0,0,0,0,108.432353782477,97.1286249030143,98.5380283115762,52.4152206148247,95.9115527678899,96.6904188658817,84.3778125289757,102.222913131898,110.113605383162,90.0902942448167,0.830298780673413,18.7541690498485,16.9026269696593,19.6916440825318,4.40187641518763,7.90527086335061,22.6691662357648,23.6940315824728,25.6735367673452,17.9415020352296,26.3618471885849,24.8986770629621,19.3837920462657,19.9118223979143,17.2880761556396,27.6250340944183,17.3826488917283,15.8185560780238,18.5438655361488,20.75504773895,19.8864166383541,23.9592338315106,15.4983523465759,21.9473089114816,20.6099543109574,19.884432854544,19.5732930973867,25.7808317209086,16.4322977753493,19.0788372363631,17.4393476642536,15.7607171800902,20.8707832016542,14.4091262302948,16.7828751553593,23.4821943261669,13.1001700729429,16.9748132698156,12.6250299165437,3.97064554415128,3.94175320554716
|short_description=p1@Csmd3
|short_description=p1@Csmd3
}}
}}

Latest revision as of 19:29, 26 September 2015

Short description:p1@Csmd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Csmd3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000022923, ENSMUST00000100670, ENSMUST00000160655, ENSMUST00000160716, NM_001081391, uc007vqu.2, uc007vqv.1_5end
EntrezGene:Csmd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Csmd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C316.79
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D371.58
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D770.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E564.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D689.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F689.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.45
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B251.24
cerebellum, neonate N30.CNhs11135.1395-42I245.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4146.65
corpus striatum, adult.CNhs10487.19-21D8156.47
corpus striatum, neonate N00.CNhs11226.630-43F133.30
cortex, adult.CNhs10473.12-14D5119.24
cortex, neonate N30.CNhs11107.1392-42F2121.98
diencephalon, adult.CNhs10482.20-12F296.41
diencephalon, neonate N30.CNhs11201.1388-42B2120.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D412.96
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G88.25
eyeball, neonate N16.CNhs11188.777-19A236.48
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E717.80
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B57.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8134.80
hippocampus, neonate N00.CNhs11228.627-43G129.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2100.99
medulla oblongata, neonate N30.CNhs11200.1396-42A385.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I9136.24
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9117.56
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1108.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A297.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A398.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A495.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A596.69
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A684.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7102.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8110.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A990.09
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H216.90
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.41
whole body, embryo E17.5.CNhs10513.490-9F916.78
whole body, embryo E17.CNhs10517.475-3I523.48
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.56e-1233
neuronal stem cell4.56e-1233
neuroblast4.56e-1233
electrically signaling cell4.56e-1233
CNS neuron (sensu Vertebrata)1.49e-1123
neuroblast (sensu Vertebrata)1.49e-1123
electrically responsive cell7.25e-0939
electrically active cell7.25e-0939
ectodermal cell1.54e-0744
neurectodermal cell1.54e-0744
neural cell1.83e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm1.31e-2264
neural plate1.31e-2264
presumptive neural plate1.31e-2264
central nervous system1.92e-2273
nervous system3.93e-2175
regional part of nervous system8.73e-2054
ectoderm-derived structure6.04e-1995
ectoderm6.04e-1995
presumptive ectoderm6.04e-1995
neural tube1.67e-1852
neural rod1.67e-1852
future spinal cord1.67e-1852
neural keel1.67e-1852
gray matter1.79e-1734
ecto-epithelium1.80e-1773
pre-chordal neural plate2.64e-1649
brain2.41e-1547
future brain2.41e-1547
regional part of brain1.39e-1446
brain grey matter3.25e-1429
regional part of telencephalon3.25e-1429
telencephalon3.25e-1429
anterior neural tube2.24e-1340
regional part of forebrain1.26e-1239
forebrain1.26e-1239
future forebrain1.26e-1239
structure with developmental contribution from neural crest1.13e-1192
cerebral cortex1.86e-0921
cerebral hemisphere1.86e-0921
pallium1.86e-0921
occipital lobe8.76e-0910
visual cortex8.76e-0910
neocortex8.76e-0910
regional part of cerebral cortex2.08e-0817
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