FFCP PHASE1:Mm9::chr15:37389082..37389135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52589 | |EntrezGene=52589 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q91X97 | |UniProt=Q91X97 | ||
|association_with_transcript=0bp_to_ENSMUST00000119730,ENSMUST00000120746,ENSMUST00000132423_5end | |association_with_transcript=0bp_to_ENSMUST00000119730,ENSMUST00000120746,ENSMUST00000132423_5end | ||
|cluster_id=chr15:37389082..37389135,- | |||
|description=CAGE_peak_1_at_Ncald_5end | |description=CAGE_peak_1_at_Ncald_5end | ||
|id=chr15:37389082..37389135,- | |id=chr15:37389082..37389135,- | ||
|ontology_enrichment_celltype=CL:0000540!5.46e-08!33;CL:0000047!5.46e-08!33;CL:0000031!5.46e-08!33;CL:0000404!5.46e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.22e-08,33;CL:0000047,5.22e-08,33;CL:0000031,5.22e-08,33;CL:0000404,5.22e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.09e-21!102;UBERON:0000924!6.09e-21!102;UBERON:0006601!6.09e-21!102;UBERON:0000073!2.72e-17!75;UBERON:0001016!2.72e-17!75;UBERON:0001017!3.53e-17!73;UBERON:0005743!3.53e-17!73;UBERON:0002346!3.74e-17!71;UBERON:0003075!3.74e-17!71;UBERON:0007284!3.74e-17!71;UBERON:0000033!3.13e-13!63;UBERON:0001049!2.64e-11!52;UBERON:0005068!2.64e-11!52;UBERON:0006241!2.64e-11!52;UBERON:0007135!2.64e-11!52;UBERON:0000955!1.29e-10!50;UBERON:0006238!1.29e-10!50;UBERON:0002616!4.14e-10!49;UBERON:0003056!8.70e-10!49;UBERON:0000468!3.90e-09!333;UBERON:0002020!4.40e-09!34;UBERON:0004111!2.77e-08!122;UBERON:0000025!5.54e-08!114;UBERON:0002021!5.79e-08!10;UBERON:0000411!5.79e-08!10;UBERON:0001950!5.79e-08!10;UBERON:0003080!1.12e-07!40;UBERON:0002780!3.31e-07!39;UBERON:0001890!3.31e-07!39;UBERON:0006240!3.31e-07!39;UBERON:0002791!7.13e-07!29;UBERON:0003528!7.13e-07!29;UBERON:0001893!7.13e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.85e-18,95;UBERON:0000924,1.85e-18,95;UBERON:0006601,1.85e-18,95;UBERON:0001016,2.15e-17,75;UBERON:0001017,2.80e-17,73;UBERON:0002346,6.76e-15,64;UBERON:0003075,6.76e-15,64;UBERON:0007284,6.76e-15,64;UBERON:0010371,6.25e-13,73;UBERON:0000073,1.76e-12,54;UBERON:0010314,1.04e-11,92;UBERON:0001049,2.20e-11,52;UBERON:0005068,2.20e-11,52;UBERON:0006241,2.20e-11,52;UBERON:0007135,2.20e-11,52;UBERON:0003056,8.23e-10,49;UBERON:0000955,3.41e-09,47;UBERON:0006238,3.41e-09,47;UBERON:0002020,4.18e-09,34;UBERON:0002616,1.04e-08,46;UBERON:0004111,2.80e-08,122;UBERON:0002021,5.54e-08,10;UBERON:0000411,5.54e-08,10;UBERON:0001950,5.54e-08,10;UBERON:0000025,5.60e-08,114;UBERON:0003080,1.08e-07,40;UBERON:0002780,3.19e-07,39;UBERON:0001890,3.19e-07,39;UBERON:0006240,3.19e-07,39;UBERON:0003528,6.87e-07,29;UBERON:0002791,6.87e-07,29;UBERON:0001893,6.87e-07,29 | |||
|phase1_expression=10.2495262147068,1.04692622291808,1.36499771816861,8.16653370528441,5.50985302940982,7.38668796412315,4.67225281191051,0.129123323441576,0.281577444303333,0,0.171217968225505,0,0,0.262261207256992,0,0.404950534779652,0,0,0.411343300817216,1.27316895539409,35.9733117339025,0,0.261199789138935,2.23989391910769,1.37645568640302,2.29692785646008,2.15380998079537,3.44753972297422,7.22088993934221,5.79669298447841,3.54768817048488,0,0,0,19.0642069035841,17.2884031172832,14.0876855821035,0,0,0,0,0,0,0.251793635951155,0.304130793658544,3.30384153891027,0,9.59310688073965,4.17403747195497,4.27745777963423,3.07970127575798,15.8127820801469,0,0,2.68875039313971,6.94600477297057,6.5902691185914,3.09403255366465,28.3243045203437,40.2033144246745,25.9870875437533,1.0165335962074,0.889294796111139,0,1.97773272513395,0,9.28760342607055,6.14749288514487,1.03689612308478,1.89008313664367,1.05162480675691,71.4127461009509,54.7753981560002,4.77714116938321,3.83381884072945,1.83843757322004,68.271846219621,88.3596379549499,90.3206415546712,41.1485217718205,49.4033275453012,40.1103295328705,69.7957497503452,68.0942758138333,74.871141410637,61.8720029494702,62.216424509208,35.975093044283,13.7821671866395,14.2830248601825,4.63783181922684,12.0459342777394,1.3599426674155,6.47643829965381,12.3457519315057,4.48026887097336,21.9093295405533,2.21559419351475,2.33807404142582,1.7666978725517,13.9434985578914,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,15.0722721229159,2.33044095282455,22.1178787206589,18.3894446372104,38.3626502673298,28.1350906652391,38.735718622024,37.6283862834255,15.3313241422204,9.14621380617183,4.19338135067744,2.65383165584962,10.8383789464764,1.98757366614354,3.87900202508178,16.775258509631,67.9251449066789,71.4213270233882,13.0283098156382,0.479260498023681,0,0.254140454146129,87.028361494202,66.3375874087008,17.8429180000267,231.707818816305,233.468212542592,102.855082056982,107.241474887788,9.67473956578005,7.58882520721567,9.85618757891331,53.0313476833914,17.8265006858904,11.2652031172402,16.3856538122868,11.9056806090215,20.4789862445497,39.8433670085883,40.1980398361237,54.3277078551933,0.431135985865684,1.32374256117473,2.28736461413134,3.94552318369635,4.44875598760957,4.87553033131033,6.37924622864625,5.37392520409932,0,0.257347907114715,0,3.31401236056803,3.51789089971644,4.68161359798639,6.39210786080068,5.1158700254325,4.78228049950873,2.32533944750408,4.82892122519315,3.61972561338225,7.24063339619314,9.68588038066662,7.45833047821873,7.45619935869195,5.92785311285837,6.84452735677896,194.307912473254,20.4780178634776,14.5384264512871,6.08236303326152,5.97207101498655,5.57368012465052,6.95884291139304,8.26902450955704,7.33847544688072,8.56015317506516,17.5575752771469,7.74085087202851,13.069430857614,12.9321706826748,11.307917052909,10.7858329038507,15.9942156907274,22.3038226044891,15.1734320762465,16.1090402779718,23.6686244913469,16.6994088833158,19.5892012039302,14.7986579968572,25.0416687012059,19.4845395333075,21.8228231699511,20.7307235388625,9.78293669387591,2.00214126859313,5.30709286805648,3.82265591054251,6.08580364165509,12.3000351473733,23.9348300674535,17.5494643844994,8.10676133875177,23.3377201209869,40.2550978276593,35.3533900285078,50.5501030445588,28.5414132080236,27.4478042688526,18.332853811808,27.7129785249907,7.76914788258988,7.98528384565927,10.3544502322865,7.74477819352057,10.3853879613926,7.61739650835244,10.5372169843211,37.2018940090611,34.7699562748577,39.7042373957143,43.4237783996706,52.3235495053664,59.7400611941643,0,0,10.3270497333998,9.3818493743609,69.1973042847383,78.6490417033683,0,5.30188947129183,27.4492150892143,35.9203644752907,46.3160305125518,23.6579109973027,26.9586395639697,34.5353367562376,38.0522059574401,35.0707029493574,50.9921233551015,80.3303291054518,25.8330955079049,6.7664929393557,7.00413925220377,28.2098910283036,9.2921596837974,23.3069410708782,17.2324427469908,18.1060876565662,14.4697927511579,12.604841065701,12.4045580720746,24.3567598749929,25.6678112436999,14.8537276229834,3.16255825724996,5.15677716240934,26.8947288545492,10.443543453816,7.76152102696527,6.43011105094777,5.85222771019503,8.56170324489939,13.3284706687718,14.6143175575008,1.64270195644597,2.96564899209348,8.60060752414351,2.80306630000516,6.94297034792394,9.04693873922338,4.53614907211919,3.77524069413641,13.9910801582328,63.7863038916153,1.70870880797853,5.15967169908056,3.51869602002452,1.69531611304222,0.410082683163076,0.915112692826091,2.20971958992012,2.79902904647316,1.93479963326193,8.59203556213602,3.79603192297362,9.75933442208874,8.4244165841005,10.6635030967379,12.2283035697859,16.7231789517178,22.3164330458407,11.5172614472973,15.2945668484316,202.556616066338,0,2.54178128274764,3.64008679005615,5.05573089694524,8.39538852605252,9.79945527846513,5.63314745499619,6.51021924219751,1.67774951081137,1.20792060413003,0.576060012515731,0.316011120628178,1.01362607645082,2.56777392912068,1.16928740680016,2.32734704367726,1.788132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| |phase1_expression=10.2495262147068,1.04692622291808,1.36499771816861,8.16653370528441,5.50985302940982,7.38668796412315,4.67225281191051,0.129123323441576,0.281577444303333,0,0.171217968225505,0,0,0.262261207256992,0,0.404950534779652,0,0,0.411343300817216,1.27316895539409,35.9733117339025,0,0.261199789138935,2.23989391910769,1.37645568640302,2.29692785646008,2.15380998079537,3.44753972297422,7.22088993934221,5.79669298447841,3.54768817048488,0,0,0,19.0642069035841,17.2884031172832,14.0876855821035,0,0,0,0,0,0,0.251793635951155,0.304130793658544,3.30384153891027,0,9.59310688073965,4.17403747195497,4.27745777963423,3.07970127575798,15.8127820801469,0,0,2.68875039313971,6.94600477297057,6.5902691185914,3.09403255366465,28.3243045203437,40.2033144246745,25.9870875437533,1.0165335962074,0.889294796111139,0,1.97773272513395,0,9.28760342607055,6.14749288514487,1.03689612308478,1.89008313664367,1.05162480675691,71.4127461009509,54.7753981560002,4.77714116938321,3.83381884072945,1.83843757322004,68.271846219621,88.3596379549499,90.3206415546712,41.1485217718205,49.4033275453012,40.1103295328705,69.7957497503452,68.0942758138333,74.871141410637,61.8720029494702,62.216424509208,35.975093044283,13.7821671866395,14.2830248601825,4.63783181922684,12.0459342777394,1.3599426674155,6.47643829965381,12.3457519315057,4.48026887097336,21.9093295405533,2.21559419351475,2.33807404142582,1.7666978725517,13.9434985578914,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,15.0722721229159,2.33044095282455,22.1178787206589,18.3894446372104,38.3626502673298,28.1350906652391,38.735718622024,37.6283862834255,15.3313241422204,9.14621380617183,4.19338135067744,2.65383165584962,10.8383789464764,1.98757366614354,3.87900202508178,16.775258509631,67.9251449066789,71.4213270233882,13.0283098156382,0.479260498023681,0,0.254140454146129,87.028361494202,66.3375874087008,17.8429180000267,231.707818816305,233.468212542592,102.855082056982,107.241474887788,9.67473956578005,7.58882520721567,9.85618757891331,53.0313476833914,17.8265006858904,11.2652031172402,16.3856538122868,11.9056806090215,20.4789862445497,39.8433670085883,40.1980398361237,54.3277078551933,0.431135985865684,1.32374256117473,2.28736461413134,3.94552318369635,4.44875598760957,4.87553033131033,6.37924622864625,5.37392520409932,0,0.257347907114715,0,3.31401236056803,3.51789089971644,4.68161359798639,6.39210786080068,5.1158700254325,4.78228049950873,2.32533944750408,4.82892122519315,3.61972561338225,7.24063339619314,9.68588038066662,7.45833047821873,7.45619935869195,5.92785311285837,6.84452735677896,194.307912473254,20.4780178634776,14.5384264512871,6.08236303326152,5.97207101498655,5.57368012465052,6.95884291139304,8.26902450955704,7.33847544688072,8.56015317506516,17.5575752771469,7.74085087202851,13.069430857614,12.9321706826748,11.307917052909,10.7858329038507,15.9942156907274,22.3038226044891,15.1734320762465,16.1090402779718,23.6686244913469,16.6994088833158,19.5892012039302,14.7986579968572,25.0416687012059,19.4845395333075,21.8228231699511,20.7307235388625,9.78293669387591,2.00214126859313,5.30709286805648,3.82265591054251,6.08580364165509,12.3000351473733,23.9348300674535,17.5494643844994,8.10676133875177,23.3377201209869,40.2550978276593,35.3533900285078,50.5501030445588,28.5414132080236,27.4478042688526,18.332853811808,27.7129785249907,7.76914788258988,7.98528384565927,10.3544502322865,7.74477819352057,10.3853879613926,7.61739650835244,10.5372169843211,37.2018940090611,34.7699562748577,39.7042373957143,43.4237783996706,52.3235495053664,59.7400611941643,0,0,10.3270497333998,9.3818493743609,69.1973042847383,78.6490417033683,0,5.30188947129183,27.4492150892143,35.9203644752907,46.3160305125518,23.6579109973027,26.9586395639697,34.5353367562376,38.0522059574401,35.0707029493574,50.9921233551015,80.3303291054518,25.8330955079049,6.7664929393557,7.00413925220377,28.2098910283036,9.2921596837974,23.3069410708782,17.2324427469908,18.1060876565662,14.4697927511579,12.604841065701,12.4045580720746,24.3567598749929,25.6678112436999,14.8537276229834,3.16255825724996,5.15677716240934,26.8947288545492,10.443543453816,7.76152102696527,6.43011105094777,5.85222771019503,8.56170324489939,13.3284706687718,14.6143175575008,1.64270195644597,2.96564899209348,8.60060752414351,2.80306630000516,6.94297034792394,9.04693873922338,4.53614907211919,3.77524069413641,13.9910801582328,63.7863038916153,1.70870880797853,5.15967169908056,3.51869602002452,1.69531611304222,0.410082683163076,0.915112692826091,2.20971958992012,2.79902904647316,1.93479963326193,8.59203556213602,3.79603192297362,9.75933442208874,8.4244165841005,10.6635030967379,12.2283035697859,16.7231789517178,22.3164330458407,11.5172614472973,15.2945668484316,202.556616066338,0,2.54178128274764,3.64008679005615,5.05573089694524,8.39538852605252,9.79945527846513,5.63314745499619,6.51021924219751,1.67774951081137,1.20792060413003,0.576060012515731,0.316011120628178,1.01362607645082,2.56777392912068,1.16928740680016,2.32734704367726,1.788132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| ||
|short_description=p1@Ncald | |short_description=p1@Ncald | ||
}} | }} |
Latest revision as of 18:27, 26 September 2015
Short description: | p1@Ncald |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ncald_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000119730, ENSMUST00000120746, ENSMUST00000132423_5end |
EntrezGene: | Ncald |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.22e-08 | 33 |
neuronal stem cell | 5.22e-08 | 33 |
neuroblast | 5.22e-08 | 33 |
electrically signaling cell | 5.22e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.85e-18 | 95 |
ectoderm | 1.85e-18 | 95 |
presumptive ectoderm | 1.85e-18 | 95 |
nervous system | 2.15e-17 | 75 |
central nervous system | 2.80e-17 | 73 |
neurectoderm | 6.76e-15 | 64 |
neural plate | 6.76e-15 | 64 |
presumptive neural plate | 6.76e-15 | 64 |
ecto-epithelium | 6.25e-13 | 73 |
regional part of nervous system | 1.76e-12 | 54 |
structure with developmental contribution from neural crest | 1.04e-11 | 92 |
neural tube | 2.20e-11 | 52 |
neural rod | 2.20e-11 | 52 |
future spinal cord | 2.20e-11 | 52 |
neural keel | 2.20e-11 | 52 |
pre-chordal neural plate | 8.23e-10 | 49 |
brain | 3.41e-09 | 47 |
future brain | 3.41e-09 | 47 |
gray matter | 4.18e-09 | 34 |
regional part of brain | 1.04e-08 | 46 |
anatomical conduit | 2.80e-08 | 122 |
occipital lobe | 5.54e-08 | 10 |
visual cortex | 5.54e-08 | 10 |
neocortex | 5.54e-08 | 10 |
tube | 5.60e-08 | 114 |
anterior neural tube | 1.08e-07 | 40 |
regional part of forebrain | 3.19e-07 | 39 |
forebrain | 3.19e-07 | 39 |
future forebrain | 3.19e-07 | 39 |
brain grey matter | 6.87e-07 | 29 |
regional part of telencephalon | 6.87e-07 | 29 |
telencephalon | 6.87e-07 | 29 |