FFCP PHASE1:Hg19::chr10:49880475..49880487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000440750_5end | |association_with_transcript=-6bp_to_ENST00000440750_5end | ||
|cluster_id=chr10:49880475..49880487,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000440750_5end | |description=CAGE_peak_1_at_ENST00000440750_5end | ||
|id=chr10:49880475..49880487,- | |id=chr10:49880475..49880487,- | ||
|ontology_enrichment_celltype=CL:0000945!1.25e-94!24;CL:0000826!1.25e-94!24;CL:0000236!4.85e-64!14;CL:0000838!3.69e-41!52;CL:0000542!2.70e-40!53;CL:0000051!2.70e-40!53;CL:0002087!1.26e-18!119;CL:0000738!4.24e-15!140;CL:0002031!2.19e-14!124;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0000785!2.48e-11!2;CL:0000955!2.48e-11!2;CL:0000818!2.48e-11!2;CL:0000954!2.48e-11!2;CL:0000816!2.48e-11!2;CL:0000988!1.74e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000817!7.72e-08!3;CL:0000842!9.19e-08!3 | |ontology_enrichment_celltype=CL:0000945!1.25e-94!24;CL:0000826!1.25e-94!24;CL:0000236!4.85e-64!14;CL:0000838!3.69e-41!52;CL:0000542!2.70e-40!53;CL:0000051!2.70e-40!53;CL:0002087!1.26e-18!119;CL:0000738!4.24e-15!140;CL:0002031!2.19e-14!124;CL:0000037!2.23e-11!172;CL:0000566!2.23e-11!172;CL:0000785!2.48e-11!2;CL:0000955!2.48e-11!2;CL:0000818!2.48e-11!2;CL:0000954!2.48e-11!2;CL:0000816!2.48e-11!2;CL:0000988!1.74e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000817!7.72e-08!3;CL:0000842!9.19e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;8.52e-116;13!CL:0000945;1.68e-75;24!CL:0000542;1.08e-24;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.92e-107,14;CL:0000945,1.68e-75,24;CL:0000826,1.68e-75,24;CL:0000838,1.86e-34,52;CL:0000542,8.62e-34,53;CL:0000051,8.62e-34,53;CL:0002087,6.11e-15,115;CL:0002031,2.79e-14,120;CL:0000738,1.72e-12,136;CL:0002032,2.13e-10,161;CL:0000837,2.13e-10,161;CL:0000037,6.39e-10,168;CL:0000988,2.31e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.08e-24;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.12e-18!10;DOID:630!6.80e-07!1;DOID:0050177!6.80e-07!1;DOID:0050427!6.80e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.25e-16;1!DOID:0050177;2.25e-16;1!DOID:0050427;2.25e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.93e-16,1;DOID:0050177,1.93e-16,1;DOID:0050427,1.93e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!7.62e-17!3;UBERON:0004854!7.62e-17!3;UBERON:0009034!7.62e-17!3;UBERON:0002095!7.62e-17!3;UBERON:0004782!7.62e-17!3;UBERON:0003281!7.62e-17!3;UBERON:0009664!7.62e-17!3;UBERON:0002296!7.62e-17!3;UBERON:0005602!7.62e-17!3;UBERON:0001179!7.62e-17!3;UBERON:0006293!7.62e-17!3;UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0004177!1.74e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@ENST00000440750 | |short_description=p1@ENST00000440750 | ||
}} | }} |
Latest revision as of 13:58, 23 July 2015
Short description: | p1@ENST00000440750 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000440750_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -6bp_to_ENST00000440750_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.92e-107 | 14 |
lymphocyte of B lineage | 1.68e-75 | 24 |
pro-B cell | 1.68e-75 | 24 |
lymphoid lineage restricted progenitor cell | 1.86e-34 | 52 |
lymphocyte | 8.62e-34 | 53 |
common lymphoid progenitor | 8.62e-34 | 53 |
nongranular leukocyte | 6.11e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.79e-14 | 120 |
leukocyte | 1.72e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.13e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-10 | 161 |
hematopoietic stem cell | 6.39e-10 | 168 |
hematopoietic cell | 2.31e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.93e-16 | 1 |
monogenic disease | 1.93e-16 | 1 |
xeroderma pigmentosum | 1.93e-16 | 1 |