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FFCP PHASE1:Mm9::chr11:119131541..119131556,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14387
|EntrezGene=14387
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-273bp_to_ENSMUST00000128753_5end
|association_with_transcript=-273bp_to_ENSMUST00000128753_5end
|cluster_id=chr11:119131541..119131556,+
|description=CAGE_peak_3_at_Gaa_5end
|description=CAGE_peak_3_at_Gaa_5end
|id=chr11:119131541..119131556,+
|id=chr11:119131541..119131556,+
|ontology_enrichment_celltype=CL:0000055!9.45e-10!50;CL:0000393!1.33e-07!39;CL:0000211!1.33e-07!39;CL:0002319!4.02e-07!43;CL:0000221!7.24e-07!44;CL:0000133!7.24e-07!44
|ontology_enrichment_celltype=CL:0000055!9.45e-10!50;CL:0000393!1.33e-07!39;CL:0000211!1.33e-07!39;CL:0002319!4.02e-07!43;CL:0000221!7.24e-07!44;CL:0000133!7.24e-07!44
|ontology_enrichment_celltype_v019_2=CL:0002321,1.47e-11,70;CL:0000723,1.53e-10,91;CL:0000048,1.53e-10,91;CL:0000034,2.10e-09,97;CL:0002319,2.85e-09,43;CL:0000393,5.61e-09,39;CL:0000211,5.61e-09,39;CL:0000221,5.91e-09,44;CL:0000133,5.91e-09,44;CL:0000182,3.96e-08,5;CL:0000117,2.35e-07,23;CL:0000337,2.35e-07,23;CL:0002194,3.11e-07,4;CL:0000766,3.11e-07,4;CL:0000234,3.11e-07,4;CL:0000576,3.11e-07,4;CL:0000235,3.11e-07,4;CL:0000864,3.11e-07,4;CL:0002009,3.11e-07,4;CL:0000040,3.11e-07,4;CL:0000559,3.11e-07,4;CL:0002610,6.31e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.83e-15!73;UBERON:0005743!1.83e-15!73;UBERON:0000073!8.78e-15!75;UBERON:0001016!8.78e-15!75;UBERON:0001049!4.10e-12!52;UBERON:0005068!4.10e-12!52;UBERON:0006241!4.10e-12!52;UBERON:0007135!4.10e-12!52;UBERON:0000025!6.99e-12!114;UBERON:0000955!7.16e-12!50;UBERON:0006238!7.16e-12!50;UBERON:0004111!1.08e-11!122;UBERON:0002616!1.77e-11!49;UBERON:0004121!1.34e-10!102;UBERON:0000924!1.34e-10!102;UBERON:0006601!1.34e-10!102;UBERON:0002020!1.51e-10!34;UBERON:0002346!7.78e-10!71;UBERON:0003075!7.78e-10!71;UBERON:0007284!7.78e-10!71;UBERON:0000033!2.00e-09!63;UBERON:0003080!1.74e-08!40;UBERON:0002791!1.88e-08!29;UBERON:0003528!1.88e-08!29;UBERON:0001893!1.88e-08!29;UBERON:0002780!3.62e-08!39;UBERON:0001890!3.62e-08!39;UBERON:0006240!3.62e-08!39;UBERON:0002021!1.78e-07!10;UBERON:0000411!1.78e-07!10;UBERON:0001950!1.78e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.86e-19,54;UBERON:0001017,1.25e-18,73;UBERON:0001016,6.80e-18,75;UBERON:0002021,8.78e-17,10;UBERON:0000411,8.78e-17,10;UBERON:0001950,8.78e-17,10;UBERON:0002020,4.71e-16,34;UBERON:0001049,6.85e-15,52;UBERON:0005068,6.85e-15,52;UBERON:0006241,6.85e-15,52;UBERON:0007135,6.85e-15,52;UBERON:0002619,8.33e-13,17;UBERON:0004121,2.84e-12,95;UBERON:0000924,2.84e-12,95;UBERON:0006601,2.84e-12,95;UBERON:0003528,4.10e-12,29;UBERON:0002791,4.10e-12,29;UBERON:0001893,4.10e-12,29;UBERON:0002616,9.72e-12,46;UBERON:0002780,1.21e-11,39;UBERON:0001890,1.21e-11,39;UBERON:0006240,1.21e-11,39;UBERON:0000025,1.58e-11,114;UBERON:0000955,2.27e-11,47;UBERON:0006238,2.27e-11,47;UBERON:0003080,3.17e-11,40;UBERON:0002346,7.55e-11,64;UBERON:0003075,7.55e-11,64;UBERON:0007284,7.55e-11,64;UBERON:0004111,3.63e-10,122;UBERON:0000956,8.50e-10,21;UBERON:0001869,8.50e-10,21;UBERON:0000203,8.50e-10,21;UBERON:0010371,1.01e-08,73;UBERON:0003056,2.86e-08,49;UBERON:0010314,1.13e-07,92;UBERON:0004684,6.31e-07,3;UBERON:0002275,6.31e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0.34243593645101,0,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0.408338712524738,0,0,0,0,0,0,2.14024590558481,2.12891555560981,0.550640256485045,3.9119567217402,0.436050312760893,0.878744730937887,2.72201858703997,2.2397827460058,0,0,0,0,1.54355661621568,0.573066879877513,1.54701627683233,0.809265843438391,0.528990979272033,0,1.0165335962074,0.889294796111139,1.7997994345628,5.93319817540185,3.5524005747305,1.79760066311043,3.45796474789399,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,2.20868540951614,0,0.0958454710182364,0,6.60695285996332,4.85211884723713,4.14737639791857,0.527545150920775,1.18933936683133,0.52091337055676,9.49222196604695,1.68828783009504,4.88954392885792,2.65165726926301,1.56608848879013,0.372798891650601,0.075726193333184,0.151143120213571,1.73918693221007,0.860423876981386,2.03991400112325,1.61910957491345,1.94932925234301,1.34408066129201,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0,0.461230994512117,0.301445281105245,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,0,1.8850203613211,0.255457055208591,0.239630249011841,0,0.127070227073065,0.748953197024114,0.457500602818626,0.502617408451458,0.869121600961382,0.255715457330331,1.45451631191692,0.811206315338788,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.257347907114715,0.568326998791185,1.03562886267751,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.05144974282064,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0,0.515469845288373,0,0.889512175379481,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0,0.493588655687202,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0,0.25462585178142,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0.964887042726734,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0,0,0.655453258862952,0.345369963731791,0.144649058581512,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.80275294993896,0.820481806145422,0.327869890753351,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0,1.61924280669958,1.75353514746787,0.395287777946524,0.963963949265421,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,1.2178597964584,0,1.0591603543191,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,1.04702376793612,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.821500670520278,0.39061315453185,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0.448569283047378,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,1.71868654031819,1.89038500578056,2.05524755931193,4.5323633843382,4.72515750162264,2.2516060161211,2.71885445390523,3.62432218226274,0,0,0.170733605754134,0,0.419226325255965,0,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.384150914429216,0.287177344778066,0,0.231768651889711,0,0,0.735994600671987,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.169229215783353,0.73171189149109,0,0.543216455383447,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0.34243593645101,0,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.157731082679119,0,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0.408338712524738,0,0,0,0,0,0,2.14024590558481,2.12891555560981,0.550640256485045,3.9119567217402,0.436050312760893,0.878744730937887,2.72201858703997,2.2397827460058,0,0,0,0,1.54355661621568,0.573066879877513,1.54701627683233,0.809265843438391,0.528990979272033,0,1.0165335962074,0.889294796111139,1.7997994345628,5.93319817540185,3.5524005747305,1.79760066311043,3.45796474789399,0.207379224616955,0.540023753326763,0.210324961351382,1.42825492201902,2.20868540951614,0,0.0958454710182364,0,6.60695285996332,4.85211884723713,4.14737639791857,0.527545150920775,1.18933936683133,0.52091337055676,9.49222196604695,1.68828783009504,4.88954392885792,2.65165726926301,1.56608848879013,0.372798891650601,0.075726193333184,0.151143120213571,1.73918693221007,0.860423876981386,2.03991400112325,1.61910957491345,1.94932925234301,1.34408066129201,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0.258937883647172,0.29688427812965,0.520455980298408,0,0.461230994512117,0.301445281105245,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.662524555381181,0,0,0,1.8850203613211,0.255457055208591,0.239630249011841,0,0.127070227073065,0.748953197024114,0.457500602818626,0.502617408451458,0.869121600961382,0.255715457330331,1.45451631191692,0.811206315338788,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.257347907114715,0.568326998791185,1.03562886267751,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.05144974282064,0.102904612379284,0.330418782983798,0.528901133327089,0.213288250535234,0,0.515469845288373,0,0.889512175379481,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.295220295959204,0,0.493588655687202,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0,0.25462585178142,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0.964887042726734,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0,0,0.655453258862952,0.345369963731791,0.144649058581512,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.80275294993896,0.820481806145422,0.327869890753351,0.252470927204373,0.631016438832513,0.390438744296638,0.646270193198397,0.238968797952552,0,0,1.61924280669958,1.75353514746787,0.395287777946524,0.963963949265421,0.425820255624806,0.35613120733451,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,0,0,0,0,1.03135543248187,2.04263763452273,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,1.2178597964584,0,1.0591603543191,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,1.04702376793612,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.506868376472335,0.821500670520278,0.39061315453185,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0.448569283047378,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,1.6942555278512,1.84130094602871,1.71868654031819,1.89038500578056,2.05524755931193,4.5323633843382,4.72515750162264,2.2516060161211,2.71885445390523,3.62432218226274,0,0,0.170733605754134,0,0.419226325255965,0,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.384150914429216,0.287177344778066,0,0.231768651889711,0,0,0.735994600671987,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.169229215783353,0.73171189149109,0,0.543216455383447,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0
|short_description=p3@Gaa
|short_description=p3@Gaa
}}
}}

Latest revision as of 02:09, 27 September 2015

Short description:p3@Gaa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gaa_5end
Coexpression cluster:NA
Association with transcript: -273bp_to_ENSMUST00000128753_5end
EntrezGene:Gaa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gaa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.86e-1954
central nervous system1.25e-1873
nervous system6.80e-1875
occipital lobe8.78e-1710
visual cortex8.78e-1710
neocortex8.78e-1710
gray matter4.71e-1634
neural tube6.85e-1552
neural rod6.85e-1552
future spinal cord6.85e-1552
neural keel6.85e-1552
regional part of cerebral cortex8.33e-1317
ectoderm-derived structure2.84e-1295
ectoderm2.84e-1295
presumptive ectoderm2.84e-1295
brain grey matter4.10e-1229
regional part of telencephalon4.10e-1229
telencephalon4.10e-1229
regional part of brain9.72e-1246
regional part of forebrain1.21e-1139
forebrain1.21e-1139
future forebrain1.21e-1139
tube1.58e-11114
brain2.27e-1147
future brain2.27e-1147
anterior neural tube3.17e-1140
neurectoderm7.55e-1164
neural plate7.55e-1164
presumptive neural plate7.55e-1164
anatomical conduit3.63e-10122
cerebral cortex8.50e-1021
cerebral hemisphere8.50e-1021
pallium8.50e-1021
ecto-epithelium1.01e-0873
pre-chordal neural plate2.86e-0849
structure with developmental contribution from neural crest1.13e-0792
raphe nuclei6.31e-073
reticular formation6.31e-073
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